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Tan0002248 (gene) of Snake gourd v1 genome

Gene IDTan0002248
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionCellulose synthase family protein
Genome locationLG03:51853304..51853552
RNA-Seq ExpressionTan0002248
SyntenyTan0002248
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA8517062.1 hypothetical protein F0562_017120 [Nyssa sinensis]1.4e-2173.24Show/hide
Query:  PPPSTEPAHCTRQSIETLAVVLAVITILGVIAGIFARLCGGKHSGGDGESDIEGWVETRCKSCIDGGLPPA
        PP   EP+H T +SIETL VVLAVITI+GVIAGI ARLCGG+H GG+GE DIEGWVE +C+SCIDGG+P A
Subjt:  PPPSTEPAHCTRQSIETLAVVLAVITILGVIAGIFARLCGGKHSGGDGESDIEGWVETRCKSCIDGGLPPA

KAF8043991.1 hypothetical protein BT93_A2081 [Corymbia citriodora subsp. variegata]1.4e-2172.6Show/hide
Query:  PPSTEPAHCTRQSIETLAVVLAVITILGVIAGIFARLCGGKHSGGDGESDIEGWVETRCKSCIDGGLPPAAEE
        PP  EP   T +SIETL VVLA ITI+GV+AGI ARLCGG+H GG GESDIEGWVE RCKSCID GLPP  E+
Subjt:  PPSTEPAHCTRQSIETLAVVLAVITILGVIAGIFARLCGGKHSGGDGESDIEGWVETRCKSCIDGGLPPAAEE

KAF8398398.1 hypothetical protein HHK36_017325 [Tetracentron sinense]1.4e-2167.06Show/hide
Query:  PPPSTEPAHCTRQSIETLAVVLAVITILGVIAGIFARLCGGKHSGGDGESDIEGWVETRCKSCIDGGLP---------PAAEEKK
        PP   E +H T +SIETL VVLAVITI+GVIAGIFARLCGG+H GG GE+DIEGWVE +C+SCIDGG+P         PAAEE K
Subjt:  PPPSTEPAHCTRQSIETLAVVLAVITILGVIAGIFARLCGGKHSGGDGESDIEGWVETRCKSCIDGGLP---------PAAEEKK

RVW16477.1 hypothetical protein CK203_069341 [Vitis vinifera]6.1e-2273.61Show/hide
Query:  PPPSTEPAHCTRQSIETLAVVLAVITILGVIAGIFARLCGGKHSGGDGESDIEGWVETRCKSCIDGGLPPAA
        PP   EP+H T +SIETL VVLAVITI+GVIAGI ARLCGG+H GG+GE+DIEGWVE +C+SCIDGG+P AA
Subjt:  PPPSTEPAHCTRQSIETLAVVLAVITILGVIAGIFARLCGGKHSGGDGESDIEGWVETRCKSCIDGGLPPAA

XP_010653790.1 PREDICTED: uncharacterized protein LOC100250289 [Vitis vinifera]6.1e-2268.29Show/hide
Query:  PPPSTEPAHCTRQSIETLAVVLAVITILGVIAGIFARLCGGKHSGGDGESDIEGWVETRCKSCIDGGL------PPAAEEKK
        PP   EP+H T +SIETL VVLAVITI+GVIAGI ARLCGG+H GG+GE+DIEGWVE +C+SCIDGG+      PP AEE K
Subjt:  PPPSTEPAHCTRQSIETLAVVLAVITILGVIAGIFARLCGGKHSGGDGESDIEGWVETRCKSCIDGGL------PPAAEEKK

TrEMBL top hitse value%identityAlignment
A0A1R3HMJ3 Uncharacterized protein1.1e-2169.33Show/hide
Query:  PPSTEPAHCTRQSIETLAVVLAVITILGVIAGIFARLCGGKHSGGDGESDIEGWVETRCKSCIDGGLPPAAEEKK
        P   EP+  + +SIETL VVLAVITI+GVIAGI ARLCGG+H GG+GE+DIEGW+E +C+SCIDGG+P AAEE K
Subjt:  PPSTEPAHCTRQSIETLAVVLAVITILGVIAGIFARLCGGKHSGGDGESDIEGWVETRCKSCIDGGLPPAAEEKK

A0A438BZT6 Uncharacterized protein3.0e-2273.61Show/hide
Query:  PPPSTEPAHCTRQSIETLAVVLAVITILGVIAGIFARLCGGKHSGGDGESDIEGWVETRCKSCIDGGLPPAA
        PP   EP+H T +SIETL VVLAVITI+GVIAGI ARLCGG+H GG+GE+DIEGWVE +C+SCIDGG+P AA
Subjt:  PPPSTEPAHCTRQSIETLAVVLAVITILGVIAGIFARLCGGKHSGGDGESDIEGWVETRCKSCIDGGLPPAA

A0A438JKT6 Uncharacterized protein3.0e-2268.29Show/hide
Query:  PPPSTEPAHCTRQSIETLAVVLAVITILGVIAGIFARLCGGKHSGGDGESDIEGWVETRCKSCIDGGL------PPAAEEKK
        PP   EP+H T +SIETL VVLAVITI+GVIAGI ARLCGG+H GG+GE+DIEGWVE +C+SCIDGG+      PP AEE K
Subjt:  PPPSTEPAHCTRQSIETLAVVLAVITILGVIAGIFARLCGGKHSGGDGESDIEGWVETRCKSCIDGGL------PPAAEEKK

A0A5B6YV78 Uncharacterized protein5.1e-2263.64Show/hide
Query:  LPEPPPSTEPAHCTRQSIETLAVVLAVITILGVIAGIFARLCGGKHSGGDGESDIEGWVETRCKSCIDGGLP---------PAAEEKK
        +  PP   EP+H T +SIETL VVLAVITI+GVIAGI ARLCGG+H GG+GE DIEGWVE +C+SCIDGG+P         PA EE K
Subjt:  LPEPPPSTEPAHCTRQSIETLAVVLAVITILGVIAGIFARLCGGKHSGGDGESDIEGWVETRCKSCIDGGLP---------PAAEEKK

A0A5J4ZHS8 Uncharacterized protein6.6e-2273.24Show/hide
Query:  PPPSTEPAHCTRQSIETLAVVLAVITILGVIAGIFARLCGGKHSGGDGESDIEGWVETRCKSCIDGGLPPA
        PP   EP+H T +SIETL VVLAVITI+GVIAGI ARLCGG+H GG+GE DIEGWVE +C+SCIDGG+P A
Subjt:  PPPSTEPAHCTRQSIETLAVVLAVITILGVIAGIFARLCGGKHSGGDGESDIEGWVETRCKSCIDGGLPPA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G26520.1 unknown protein1.3e-0939.74Show/hide
Query:  EPPPSTEPAH-------CTRQSIETLAVVLAVITILGVIAGIFARLCGGKHSGGDGESDIEGWVETRCKSCIDGGLPP
        +PPP+TE +            +I     V  V+T+L V+A +  RLC GK   G G+ D+E W E+RC SCIDG + P
Subjt:  EPPPSTEPAH-------CTRQSIETLAVVLAVITILGVIAGIFARLCGGKHSGGDGESDIEGWVETRCKSCIDGGLPP

AT3G57500.1 unknown protein3.6e-2061.97Show/hide
Query:  EPPPSTEPAH-CTRQSIETLAVVLAVITILGVIAGIFARLCGGKHSGGDGESDIEGWVETRCKSCIDGGLP
        +PP   +P+H    +SIETL VVLAVITIL V+AG+FARLCGG+H    G+ DIEGWVE +C+SCID G+P
Subjt:  EPPPSTEPAH-CTRQSIETLAVVLAVITILGVIAGIFARLCGGKHSGGDGESDIEGWVETRCKSCIDGGLP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGCACCTGCCGGAGCCACCGCCCTCGACGGAGCCAGCCCACTGCACTCGTCAGTCCATTGAGACGCTGGCGGTGGTGCTGGCCGTGATCACCATTTTAGGCGTCAT
TGCCGGAATCTTCGCTCGCCTCTGCGGCGGAAAGCATTCCGGCGGTGACGGAGAAAGTGACATTGAAGGTTGGGTTGAAACAAGGTGCAAGAGCTGCATTGACGGCGGCC
TCCCTCCGGCGGCGGAGGAGAAAAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAGCACCTGCCGGAGCCACCGCCCTCGACGGAGCCAGCCCACTGCACTCGTCAGTCCATTGAGACGCTGGCGGTGGTGCTGGCCGTGATCACCATTTTAGGCGTCAT
TGCCGGAATCTTCGCTCGCCTCTGCGGCGGAAAGCATTCCGGCGGTGACGGAGAAAGTGACATTGAAGGTTGGGTTGAAACAAGGTGCAAGAGCTGCATTGACGGCGGCC
TCCCTCCGGCGGCGGAGGAGAAAAAGTGA
Protein sequenceShow/hide protein sequence
MQHLPEPPPSTEPAHCTRQSIETLAVVLAVITILGVIAGIFARLCGGKHSGGDGESDIEGWVETRCKSCIDGGLPPAAEEKK