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Tan0002263 (gene) of Snake gourd v1 genome

Gene IDTan0002263
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionB3 domain-containing protein
Genome locationLG05:69772417..69777523
RNA-Seq ExpressionTan0002263
SyntenyTan0002263
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR003340 - B3 DNA binding domain
IPR015300 - DNA-binding pseudobarrel domain superfamily
IPR044837 - B3 domain-containing protein REM16-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049060.1 B3 domain-containing protein [Cucumis melo var. makuwa]8.9e-2785.14Show/hide
Query:  AVLLVKFHSVLPAIVIPVVLTVGGKKWKIDYYGNRRGKALDTKQWRKFVNDNHYKSGDACVFELIECSSSILKF
        AVL  KFHS+LPAIVIP VL   GKKWKIDYYGNRRGKALD+KQWRKFVNDN  KSGDACVFEL+ECSSSILKF
Subjt:  AVLLVKFHSVLPAIVIPVVLTVGGKKWKIDYYGNRRGKALDTKQWRKFVNDNHYKSGDACVFELIECSSSILKF

XP_022941967.1 B3 domain-containing protein Os04g0386900-like [Cucurbita moschata]2.6e-2666.33Show/hide
Query:  LIPLKKLSHQASKNKKKHIKV---AVLLVKFHSVLPAIVIPVVLTVGGKKWKIDYYGNRRGKALDTKQWRKFVNDNHYKSGDACVFELIECSSSILKF
        ++PL    +      K H+       L  KFHSVLPAI+IP VL   GKKWKIDYYGNRRGKALDTKQWRKFVNDNH K GDACVFELIECSSS++KF
Subjt:  LIPLKKLSHQASKNKKKHIKV---AVLLVKFHSVLPAIVIPVVLTVGGKKWKIDYYGNRRGKALDTKQWRKFVNDNHYKSGDACVFELIECSSSILKF

XP_022974195.1 B3 domain-containing protein Os04g0386900-like [Cucurbita maxima]1.5e-2667.35Show/hide
Query:  LIPLKKLSHQASKNKKKHIKV---AVLLVKFHSVLPAIVIPVVLTVGGKKWKIDYYGNRRGKALDTKQWRKFVNDNHYKSGDACVFELIECSSSILKF
        ++PL    +      K H+       L  KFHSVLPAI+IP VL   GKKWKIDYYGNRRGKALDTKQWRKFVNDNH K GDACVFELIECSSS+LKF
Subjt:  LIPLKKLSHQASKNKKKHIKV---AVLLVKFHSVLPAIVIPVVLTVGGKKWKIDYYGNRRGKALDTKQWRKFVNDNHYKSGDACVFELIECSSSILKF

XP_023539026.1 B3 domain-containing protein Os04g0386900-like [Cucurbita pepo subsp. pepo]8.9e-2786.96Show/hide
Query:  KFHSVLPAIVIPVVLTVGGKKWKIDYYGNRRGKALDTKQWRKFVNDNHYKSGDACVFELIECSSSILKF
        KFHSVLPAI+IP VL   GKKWKIDYYGNRRGKALDTKQWRKFVNDNH K GDACVFELIECSSS++KF
Subjt:  KFHSVLPAIVIPVVLTVGGKKWKIDYYGNRRGKALDTKQWRKFVNDNHYKSGDACVFELIECSSSILKF

XP_038903804.1 B3 domain-containing protein Os04g0386900-like [Benincasa hispida]1.5e-2668.37Show/hide
Query:  LIPLKKLSHQASKNKKKHIK---VAVLLVKFHSVLPAIVIPVVLTVGGKKWKIDYYGNRRGKALDTKQWRKFVNDNHYKSGDACVFELIECSSSILKF
        ++PL    + A    K H+      VL  KFHS+LPAIVIP VL   GKKW IDYYGNRRGKALDTKQWRKFVNDN  KSGDACVFEL+ECSSSILKF
Subjt:  LIPLKKLSHQASKNKKKHIK---VAVLLVKFHSVLPAIVIPVVLTVGGKKWKIDYYGNRRGKALDTKQWRKFVNDNHYKSGDACVFELIECSSSILKF

TrEMBL top hitse value%identityAlignment
A0A0A0L3V3 TF-B3 domain-containing protein5.2e-2567.01Show/hide
Query:  IPLKKLSHQASKNKKKHIKV---AVLLVKFHSVLPAIVIPVVLTVGGKKWKIDYYGNRRGKALDTKQWRKFVNDNHYKSGDACVFELIECSSSILKF
        +PL    + A    K H+      VL  KFHS+LPAIVIP VL   GKKWKIDY+GNRRGKALD+KQWRKFVNDN  KSGDA VFEL+ECSSSILKF
Subjt:  IPLKKLSHQASKNKKKHIKV---AVLLVKFHSVLPAIVIPVVLTVGGKKWKIDYYGNRRGKALDTKQWRKFVNDNHYKSGDACVFELIECSSSILKF

A0A5D3D009 B3 domain-containing protein4.3e-2785.14Show/hide
Query:  AVLLVKFHSVLPAIVIPVVLTVGGKKWKIDYYGNRRGKALDTKQWRKFVNDNHYKSGDACVFELIECSSSILKF
        AVL  KFHS+LPAIVIP VL   GKKWKIDYYGNRRGKALD+KQWRKFVNDN  KSGDACVFEL+ECSSSILKF
Subjt:  AVLLVKFHSVLPAIVIPVVLTVGGKKWKIDYYGNRRGKALDTKQWRKFVNDNHYKSGDACVFELIECSSSILKF

A0A6J1D033 B3 domain-containing protein Os04g0386900-like2.6e-2479.17Show/hide
Query:  LLVKFHSVLPAIVIPVVLTVGGKKWKIDYYGNRRGKALDTKQWRKFVNDNHYKSGDACVFELIECSSSILKF
        L  KFHSVLPAIVI  VL  GGK+W +DYYGNRRGK+LDT+ WRKFVNDNH KSGDACVFEL+ECSSS LKF
Subjt:  LLVKFHSVLPAIVIPVVLTVGGKKWKIDYYGNRRGKALDTKQWRKFVNDNHYKSGDACVFELIECSSSILKF

A0A6J1FTK2 B3 domain-containing protein Os04g0386900-like1.2e-2666.33Show/hide
Query:  LIPLKKLSHQASKNKKKHIKV---AVLLVKFHSVLPAIVIPVVLTVGGKKWKIDYYGNRRGKALDTKQWRKFVNDNHYKSGDACVFELIECSSSILKF
        ++PL    +      K H+       L  KFHSVLPAI+IP VL   GKKWKIDYYGNRRGKALDTKQWRKFVNDNH K GDACVFELIECSSS++KF
Subjt:  LIPLKKLSHQASKNKKKHIKV---AVLLVKFHSVLPAIVIPVVLTVGGKKWKIDYYGNRRGKALDTKQWRKFVNDNHYKSGDACVFELIECSSSILKF

A0A6J1IDC2 B3 domain-containing protein Os04g0386900-like7.3e-2767.35Show/hide
Query:  LIPLKKLSHQASKNKKKHIKV---AVLLVKFHSVLPAIVIPVVLTVGGKKWKIDYYGNRRGKALDTKQWRKFVNDNHYKSGDACVFELIECSSSILKF
        ++PL    +      K H+       L  KFHSVLPAI+IP VL   GKKWKIDYYGNRRGKALDTKQWRKFVNDNH K GDACVFELIECSSS+LKF
Subjt:  LIPLKKLSHQASKNKKKHIKV---AVLLVKFHSVLPAIVIPVVLTVGGKKWKIDYYGNRRGKALDTKQWRKFVNDNHYKSGDACVFELIECSSSILKF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G33280.1 AP2/B3-like transcriptional factor family protein5.0e-0443.75Show/hide
Query:  VVLTVGGKKW--KIDYYGNRRGKALDTKQWRKFVNDNHYKSGDACVFE
        VV+ V   KW  K + +G R    + T  W+KFV DN+ + GD CVFE
Subjt:  VVLTVGGKKW--KIDYYGNRRGKALDTKQWRKFVNDNHYKSGDACVFE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGTTGACTGGGCTAGGGGTCTTCTCCATATTCTCATACCATTGAAGAAGCTCTCCCATCAAGCATCGAAGAACAAGAAGAAGCATATCAAAGTAGCGGTTTTGCT
AGTCAAATTCCATTCTGTTTTACCTGCTATTGTGATCCCTGTGGTTCTTACTGTGGGGGGCAAGAAATGGAAGATAGATTATTATGGGAACCGACGCGGTAAAGCGCTTG
ACACAAAACAGTGGAGGAAGTTTGTTAATGACAATCATTACAAATCTGGAGATGCTTGTGTGTTTGAGCTAATAGAATGCAGCAGCAGTATACTCAAATTCTCAGAGGAG
ACATCCCTCTCCCGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATGTTGACTGGGCTAGGGGTCTTCTCCATATTCTCATACCATTGAAGAAGCTCTCCCATCAAGCATCGAAGAACAAGAAGAAGCATATCAAAGTAGCGGTTTTGCT
AGTCAAATTCCATTCTGTTTTACCTGCTATTGTGATCCCTGTGGTTCTTACTGTGGGGGGCAAGAAATGGAAGATAGATTATTATGGGAACCGACGCGGTAAAGCGCTTG
ACACAAAACAGTGGAGGAAGTTTGTTAATGACAATCATTACAAATCTGGAGATGCTTGTGTGTTTGAGCTAATAGAATGCAGCAGCAGTATACTCAAATTCTCAGAGGAG
ACATCCCTCTCCCGTTGA
Protein sequenceShow/hide protein sequence
MDVDWARGLLHILIPLKKLSHQASKNKKKHIKVAVLLVKFHSVLPAIVIPVVLTVGGKKWKIDYYGNRRGKALDTKQWRKFVNDNHYKSGDACVFELIECSSSILKFSEE
TSLSR