; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0002322 (gene) of Snake gourd v1 genome

Gene IDTan0002322
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionsplicing factor U2af small subunit B-like
Genome locationLG01:116793360..116795717
RNA-Seq ExpressionTan0002322
SyntenyTan0002322
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0005681 - spliceosomal complex (cellular component)
GO:0089701 - U2AF (cellular component)
GO:0030628 - pre-mRNA 3'-splice site binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR000571 - Zinc finger, CCCH-type
IPR003954 - RNA recognition motif domain, eukaryote
IPR009145 - U2 auxiliary factor small subunit
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022142994.1 splicing factor U2af small subunit B-like [Momordica charantia]1.2e-15199.27Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNV
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNV
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNV

Query:  CDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFGRYRGYRRSRSRSRS
        CDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFGRYRGYRRSRSRSRS
Subjt:  CDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFGRYRGYRRSRSRSRS

Query:  LSPRNRKDYDRRERDYRDRDHRGNGRSKERYDRYDRDGGRRRHGSPRRSRSPVREGSEERRARIEQWNREREEK
        LSPRNRKDYDRRERD+RDRD RGNGRSKERYDRYDRDGGRRRHGSPRRSRSPVREGSEERRARIEQWNREREEK
Subjt:  LSPRNRKDYDRRERDYRDRDHRGNGRSKERYDRYDRDGGRRRHGSPRRSRSPVREGSEERRARIEQWNREREEK

XP_022936161.1 splicing factor U2af small subunit B-like [Cucurbita moschata]1.6e-14696.39Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNV
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIE LNV
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNV

Query:  CDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFGRYRGYR--RSRSRS
        CDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFGR+RGYR  RSRSRS
Subjt:  CDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFGRYRGYR--RSRSRS

Query:  RSLSPRNRKDYDRRERDYRDRDHRGNGRSKERYDRYDRDGGRRRHGSPRRSRSPVREGSEERRARIEQWNREREEKQ
        RSLSPRNRK+ DRRERDYRDR+ RGNGRSKER+DRYDRDGGRRRHGSPRRSRSPVREGS ERRARIEQWNREREEKQ
Subjt:  RSLSPRNRKDYDRRERDYRDRDHRGNGRSKERYDRYDRDGGRRRHGSPRRSRSPVREGSEERRARIEQWNREREEKQ

XP_022941119.1 splicing factor U2af small subunit B-like [Cucurbita moschata]2.3e-15098.55Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNV
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLN+
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNV

Query:  CDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFG-RYRGYRRSRSRSR
        CDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFG R+RGYRRSRSRSR
Subjt:  CDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFG-RYRGYRRSRSRSR

Query:  SLSPRNRKDYDRRERDYRDRDHRGNGRSKERYDRYDRDGGRRRHGSPRRSRSPVREGSEERRARIEQWNREREEKQ
        SLSPRNRKDYDRRERDYRDRDHRGNGRSKER DRYDRDGGRRRHGSPRRSRSPVREGSEERRARIEQWNREREEKQ
Subjt:  SLSPRNRKDYDRRERDYRDRDHRGNGRSKERYDRYDRDGGRRRHGSPRRSRSPVREGSEERRARIEQWNREREEKQ

XP_023521110.1 splicing factor U2af small subunit B-like [Cucurbita pepo subsp. pepo]4.9e-14897.09Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNV
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIE LNV
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNV

Query:  CDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFGRYRGYRRSRSRSRS
        CDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFGR+RGYRRSRSRSRS
Subjt:  CDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFGRYRGYRRSRSRSRS

Query:  LSPRNRKDYDRRERDYRDRDHRGNGRSKERYDRYDRDGGRRRHGSPRRSRSPVREGSEERRARIEQWNREREEKQ
        LSPRNRK+ DRRERDYRDR+ RGNGRSKER+DRYDRDGGRRRHGSPRRSRSPVREGS ERRARIEQWNREREEKQ
Subjt:  LSPRNRKDYDRRERDYRDRDHRGNGRSKERYDRYDRDGGRRRHGSPRRSRSPVREGSEERRARIEQWNREREEKQ

XP_023525325.1 splicing factor U2af small subunit B-like [Cucurbita pepo subsp. pepo]6.8e-15098.19Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNV
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLN+
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNV

Query:  CDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFG-RYRGYRRSRSRSR
        CDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFG R+RGYRRSRSRSR
Subjt:  CDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFG-RYRGYRRSRSRSR

Query:  SLSPRNRKDYDRRERDYRDRDHRGNGRSKERYDRYDRDGGRRRHGSPRRSRSPVREGSEERRARIEQWNREREEKQ
        SLSPRNRKDYDRRERDYRDRDHRGNGRSKER DR+DRDGGRRRHGSPRRSRSPVREGSEERRARIEQWNREREEKQ
Subjt:  SLSPRNRKDYDRRERDYRDRDHRGNGRSKERYDRYDRDGGRRRHGSPRRSRSPVREGSEERRARIEQWNREREEKQ

TrEMBL top hitse value%identityAlignment
A0A5A7VFL1 Splicing factor U2af small subunit B-like6.0e-14495.34Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNV
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNV
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNV

Query:  CDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFGRYRGYRRSRSRSRS
        CDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFGRYRGYR SRSRSRS
Subjt:  CDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFGRYRGYRRSRSRSRS

Query:  LSPRNRKDYDRRERDYRDRDHRGNGRSKERYDRYDRDGGRRRHGSPR--RSRSPV--REGSEERRARIEQWNREREEKQ
        LSPRNRK+YDRRERDYR+R++RGNGRSKE   R+DRDGGRRRHGSPR  RSRSPV  REGSEERRARIEQWNREREEKQ
Subjt:  LSPRNRKDYDRRERDYRDRDHRGNGRSKERYDRYDRDGGRRRHGSPR--RSRSPV--REGSEERRARIEQWNREREEKQ

A0A6J1CN17 splicing factor U2af small subunit B-like6.0e-15299.27Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNV
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNV
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNV

Query:  CDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFGRYRGYRRSRSRSRS
        CDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFGRYRGYRRSRSRSRS
Subjt:  CDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFGRYRGYRRSRSRSRS

Query:  LSPRNRKDYDRRERDYRDRDHRGNGRSKERYDRYDRDGGRRRHGSPRRSRSPVREGSEERRARIEQWNREREEK
        LSPRNRKDYDRRERD+RDRD RGNGRSKERYDRYDRDGGRRRHGSPRRSRSPVREGSEERRARIEQWNREREEK
Subjt:  LSPRNRKDYDRRERDYRDRDHRGNGRSKERYDRYDRDGGRRRHGSPRRSRSPVREGSEERRARIEQWNREREEK

A0A6J1F6R3 splicing factor U2af small subunit B-like7.6e-14796.39Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNV
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIE LNV
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNV

Query:  CDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFGRYRGYR--RSRSRS
        CDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFGR+RGYR  RSRSRS
Subjt:  CDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFGRYRGYR--RSRSRS

Query:  RSLSPRNRKDYDRRERDYRDRDHRGNGRSKERYDRYDRDGGRRRHGSPRRSRSPVREGSEERRARIEQWNREREEKQ
        RSLSPRNRK+ DRRERDYRDR+ RGNGRSKER+DRYDRDGGRRRHGSPRRSRSPVREGS ERRARIEQWNREREEKQ
Subjt:  RSLSPRNRKDYDRRERDYRDRDHRGNGRSKERYDRYDRDGGRRRHGSPRRSRSPVREGSEERRARIEQWNREREEKQ

A0A6J1FSM7 splicing factor U2af small subunit B-like1.1e-15098.55Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNV
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLN+
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNV

Query:  CDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFG-RYRGYRRSRSRSR
        CDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFG R+RGYRRSRSRSR
Subjt:  CDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFG-RYRGYRRSRSRSR

Query:  SLSPRNRKDYDRRERDYRDRDHRGNGRSKERYDRYDRDGGRRRHGSPRRSRSPVREGSEERRARIEQWNREREEKQ
        SLSPRNRKDYDRRERDYRDRDHRGNGRSKER DRYDRDGGRRRHGSPRRSRSPVREGSEERRARIEQWNREREEKQ
Subjt:  SLSPRNRKDYDRRERDYRDRDHRGNGRSKERYDRYDRDGGRRRHGSPRRSRSPVREGSEERRARIEQWNREREEKQ

A0A6J1IV82 splicing factor U2af small subunit B-like1.1e-15098.55Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNV
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLN+
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNV

Query:  CDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFG-RYRGYRRSRSRSR
        CDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFG R+RGYRRSRSRSR
Subjt:  CDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFG-RYRGYRRSRSRSR

Query:  SLSPRNRKDYDRRERDYRDRDHRGNGRSKERYDRYDRDGGRRRHGSPRRSRSPVREGSEERRARIEQWNREREEKQ
        SLSPRNRKDYDRRERDYRDRDHRGNGRSKER DRYDRDGGRRRHGSPRRSRSPVREGSEERRARIEQWNREREEKQ
Subjt:  SLSPRNRKDYDRRERDYRDRDHRGNGRSKERYDRYDRDGGRRRHGSPRRSRSPVREGSEERRARIEQWNREREEKQ

SwissProt top hitse value%identityAlignment
A1A4K8 Splicing factor U2AF 35 kDa subunit2.8e-6652.14Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEEL-GKFGEIESLN
        MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLHN+PT S T+ L N+Y+ P   +   D     +   ++QEH+++F+E+++ E+  K+GE+E +N
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEEL-GKFGEIESLN

Query:  VCDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFGRYRGYRRSRSRSR
        VCDNL DH++GNVYV+FR E+ A  A+  L  R+++G+PI A+ SPVTDFREA CRQYE   C RGG+CNFMH+K I ++LRR+L+GR R   RSRSRSR
Subjt:  VCDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFGRYRGYRRSRSRSR

Query:  SLSPRNRKDYDRRERDYRDRDHRGNGRSKERYDRYDRDGGRRRHGSPRRSRSPVREG
                  +RR R  RDR   G G            GG  R    RRSR   R G
Subjt:  SLSPRNRKDYDRRERDYRDRDHRGNGRSKERYDRYDRDGGRRRHGSPRRSRSPVREG

Q6AUG0 Splicing factor U2af small subunit B6.0e-11774.51Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNV
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPT+SPT++L+NMYQRPDMITPGVDAQGQPIDP K+QEHFEDFYEDIYEEL KFGE+E+LNV
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNV

Query:  CDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFGRYRGYRRSRSRSRS
        CDNLADHMIGNVYVQFREE+QA AA  ALQGRFYSGRPII ++SPVTDFREATCRQ+EEN+CNRGGYCNFMHVK IG++LRRKL+G     RRS  RSRS
Subjt:  CDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFGRYRGYRRSRSRSRS

Query:  LSPRNR-----KDYDRRERD--------------------YRDRD-HRGNG-----RSKERYDRYDRDGGRRRHGS-PRRSRSPVREGSEERRARIEQWN
         SPR+R     +D  RRERD                    YR  D +RG G         RYDRYD DGGRRRHGS PRR+RSPVRE SEERRA+IEQWN
Subjt:  LSPRNR-----KDYDRRERD--------------------YRDRD-HRGNG-----RSKERYDRYDRDGGRRRHGS-PRRSRSPVREGSEERRARIEQWN

Query:  REREEK
        REREEK
Subjt:  REREEK

Q9FMY5 Splicing factor U2af small subunit B5.8e-12885.41Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNV
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVD QGQP+DP KIQ+HFEDFYEDI+EEL KFGE+ESLNV
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNV

Query:  CDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFGRY-RGYRR-SRSRS
        CDNLADHMIGNVYV F+EED AAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEEN+CNRGGYCNFMHVK I ++LRRKLFGRY R YRR SRSRS
Subjt:  CDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFGRY-RGYRR-SRSRS

Query:  RSLSPRNRKDYDR-RER-DYRDRDHRGNG-RSKERYDRYDRD-GGRRRHGSPRRSRSP--VREGSEERRARIEQWNREREE
        RS+SPR ++++ R RER D RDRD  GNG RS +R +R+DRD GGRRRHGSP+RSRSP  VREGSEERRARIEQWNRER+E
Subjt:  RSLSPRNRKDYDR-RER-DYRDRDHRGNG-RSKERYDRYDRD-GGRRRHGSPRRSRSP--VREGSEERRARIEQWNREREE

Q9S709 Splicing factor U2af small subunit A1.4e-12681.51Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNV
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQP+DPRKIQEHFEDF+ED++EELGKFGEIESLN+
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNV

Query:  CDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFGRY-RGYR---RSRS
        CDNLADHMIGNVYVQF+EEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVK++ ++LRRKLFGRY R YR   RSRS
Subjt:  CDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFGRY-RGYR---RSRS

Query:  RSRSLSPRNRKDYDRRERDYRDRDHR---------GNG-RSKERYDRYDRDGGR-RRHGSPRRSRSP--VREGSEERRARIEQWNREREEKQ
        RSRS+SPRN++D DRR+  +R+  HR         G+G RS ER +R +RDG R RR  SP+R  SP   REGSEERRARIEQWNREREEK+
Subjt:  RSRSLSPRNRKDYDRRERDYRDRDHR---------GNG-RSKERYDRYDRDGGR-RRHGSPRRSRSP--VREGSEERRARIEQWNREREEKQ

Q9ZQW8 Splicing factor U2af small subunit A2.6e-11273.97Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNV
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHN+P++SPTLLLSNMY RPDMITPG+DAQG PIDP KIQ  FEDFYEDI+EEL K+GEIESL+V
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNV

Query:  CDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFGRYRGYRRSRSRSRS
        CDN ADHMIGNVYVQFREEDQAA ALQAL GR+YSGRPII +FSPV+DFREATCRQYEEN+CNRGGYCNFMHVK IG+DLR++LFG     RRS S  RS
Subjt:  CDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFGRYRGYRRSRSRSRS

Query:  LSP---RNRKDYDRRERDYRDRDH-------------RGNGRSKERY-DRYDRDGGRRRHGSPRRSRSPVREGSEERRARIEQWNREREEKQ
         SP     R+DYDRR    R RDH              G+ RS ER+   YD DG RRRH S  R+RSPVR+GSEERRA+IEQWNRERE  Q
Subjt:  LSP---RNRKDYDRRERDYRDRDH-------------RGNGRSKERY-DRYDRDGGRRRHGSPRRSRSPVREGSEERRARIEQWNREREEKQ

Arabidopsis top hitse value%identityAlignment
AT1G10320.1 Zinc finger C-x8-C-x5-C-x3-H type family protein1.6e-2732.57Show/hide
Query:  FGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNVCDNLADHM
        FGTE+D+ +CPF+ K GACR G RCSR+H  P  S TLL+ NMY  P  IT   D +G      + +  +E+FYED++ E  K+GE+ +  VC N + H+
Subjt:  FGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNVCDNLADHM

Query:  IGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEEN---NCNRGGYCNFMH-VKMIGKDLR----------------RKLFG--
         GNVYV +R  + A  A Q++ GR+++G+ +  +F  ++ ++ A C +Y ++    C+RG  CNF+H  +  G D                    LFG  
Subjt:  IGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEEN---NCNRGGYCNFMH-VKMIGKDLR----------------RKLFG--

Query:  --RYRGYRRSRSRSRS---LSPRNRKDYDRRER-------------DYRDRDHRGNGRSKERYDRYDRDGGRRRHG--SPRRSRSPVREGSEERRARIEQ
          ++  +  S S + S   LS  + +   RR R              YR R + G+ +   R D+  R       G  SP R  S  RE  +ERR   + 
Subjt:  --RYRGYRRSRSRSRS---LSPRNRKDYDRRER-------------DYRDRDHRGNGRSKERYDRYDRDGGRRRHG--SPRRSRSPVREGSEERRARIEQ

Query:  WNRE
         +R+
Subjt:  WNRE

AT1G27650.1 U2 snRNP auxiliary factor small subunit, putative1.0e-12781.51Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNV
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQP+DPRKIQEHFEDF+ED++EELGKFGEIESLN+
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNV

Query:  CDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFGRY-RGYR---RSRS
        CDNLADHMIGNVYVQF+EEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVK++ ++LRRKLFGRY R YR   RSRS
Subjt:  CDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFGRY-RGYR---RSRS

Query:  RSRSLSPRNRKDYDRRERDYRDRDHR---------GNG-RSKERYDRYDRDGGR-RRHGSPRRSRSP--VREGSEERRARIEQWNREREEKQ
        RSRS+SPRN++D DRR+  +R+  HR         G+G RS ER +R +RDG R RR  SP+R  SP   REGSEERRARIEQWNREREEK+
Subjt:  RSRSLSPRNRKDYDRRERDYRDRDHR---------GNG-RSKERYDRYDRDGGR-RRHGSPRRSRSP--VREGSEERRARIEQWNREREEKQ

AT1G27650.2 U2 snRNP auxiliary factor small subunit, putative5.1e-9577.69Show/hide
Query:  MYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNVCDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFR
        MYQRPDMITPGVDAQGQP+DPRKIQEHFEDF+ED++EELGKFGEIESLN+CDNLADHMIGNVYVQF+EEDQAAAALQALQGRFYSGRPIIADFSPVTDFR
Subjt:  MYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNVCDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFR

Query:  EATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFGRY-RGYR---RSRSRSRSLSPRNRKDYDRRERDYRDRDHR---------GNG-RSKERYDRYDR
        EATCRQYEENNCNRGGYCNFMHVK++ ++LRRKLFGRY R YR   RSRSRSRS+SPRN++D DRR+  +R+  HR         G+G RS ER +R +R
Subjt:  EATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFGRY-RGYR---RSRSRSRSLSPRNRKDYDRRERDYRDRDHR---------GNG-RSKERYDRYDR

Query:  DGGR-RRHGSPRRSRSP--VREGSEERRARIEQWNREREEKQ
        DG R RR  SP+R  SP   REGSEERRARIEQWNREREEK+
Subjt:  DGGR-RRHGSPRRSRSP--VREGSEERRARIEQWNREREEKQ

AT5G42820.1 Zinc finger C-x8-C-x5-C-x3-H type family protein4.1e-12985.41Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNV
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVD QGQP+DP KIQ+HFEDFYEDI+EEL KFGE+ESLNV
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNV

Query:  CDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFGRY-RGYRR-SRSRS
        CDNLADHMIGNVYV F+EED AAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEEN+CNRGGYCNFMHVK I ++LRRKLFGRY R YRR SRSRS
Subjt:  CDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFGRY-RGYRR-SRSRS

Query:  RSLSPRNRKDYDR-RER-DYRDRDHRGNG-RSKERYDRYDRD-GGRRRHGSPRRSRSP--VREGSEERRARIEQWNREREE
        RS+SPR ++++ R RER D RDRD  GNG RS +R +R+DRD GGRRRHGSP+RSRSP  VREGSEERRARIEQWNRER+E
Subjt:  RSLSPRNRKDYDR-RER-DYRDRDHRGNG-RSKERYDRYDRD-GGRRRHGSPRRSRSP--VREGSEERRARIEQWNREREE

AT5G42820.2 Zinc finger C-x8-C-x5-C-x3-H type family protein4.1e-12985.41Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNV
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVD QGQP+DP KIQ+HFEDFYEDI+EEL KFGE+ESLNV
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNV

Query:  CDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFGRY-RGYRR-SRSRS
        CDNLADHMIGNVYV F+EED AAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEEN+CNRGGYCNFMHVK I ++LRRKLFGRY R YRR SRSRS
Subjt:  CDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFGRY-RGYRR-SRSRS

Query:  RSLSPRNRKDYDR-RER-DYRDRDHRGNG-RSKERYDRYDRD-GGRRRHGSPRRSRSP--VREGSEERRARIEQWNREREE
        RS+SPR ++++ R RER D RDRD  GNG RS +R +R+DRD GGRRRHGSP+RSRSP  VREGSEERRARIEQWNRER+E
Subjt:  RSLSPRNRKDYDR-RER-DYRDRDHRGNG-RSKERYDRYDRD-GGRRRHGSPRRSRSP--VREGSEERRARIEQWNREREE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGAACACTTGGCCTCAATATTTGGCACCGAGAAGGACCGTGTCAACTGCCCTTTCTATTTCAAGATCGGCGCCTGCCGTCATGGAGATCGCTGCTCTCGCCTCCA
CAACCGCCCTACTATTTCCCCGACTCTTCTCTTATCGAACATGTACCAGCGCCCCGACATGATCACCCCTGGCGTCGATGCCCAGGGCCAACCCATAGATCCCCGCAAGA
TTCAGGAACACTTTGAGGATTTCTACGAAGACATTTACGAGGAACTCGGAAAGTTCGGTGAGATCGAGAGCCTCAACGTCTGTGATAATCTCGCCGACCACATGATTGGC
AATGTGTACGTTCAGTTCAGGGAGGAGGACCAGGCTGCTGCCGCACTCCAAGCGTTGCAGGGGAGGTTCTACTCTGGTCGACCCATTATCGCAGATTTTTCTCCGGTGAC
TGATTTCCGCGAGGCCACCTGCCGCCAGTACGAGGAGAATAATTGTAATCGAGGTGGATATTGCAATTTTATGCATGTTAAGATGATTGGTAAGGATTTGAGGAGGAAGC
TGTTCGGTAGGTACCGGGGATATAGGCGGAGCCGGAGCAGGAGTAGAAGTTTGAGTCCGCGGAATCGGAAGGACTACGATAGGCGTGAGAGGGATTACAGAGATCGTGAC
CATCGCGGAAACGGGCGGAGCAAGGAGCGTTACGATAGGTATGATAGGGATGGGGGAAGGAGAAGGCATGGTAGCCCCAGACGAAGCAGAAGCCCTGTCAGAGAAGGTAG
CGAAGAACGCCGAGCCCGTATTGAACAGTGGAACAGAGAAAGGGAGGAGAAGCAGTGA
mRNA sequenceShow/hide mRNA sequence
CTCCATTTTAATTTTAAAATATGTATTTTTATGTTATTTAACTATTTTTTTGGGGAAAAAAAAAACAACATGGAAACTTTTAAAACTAGTGACTGATATACGAATTTAAA
CTTTTAAAATCTAATATTTTTGTATGTGTTAAAAAAACTTTTTGTTTGAAGACATTAGCAATTAAGCCATGTCTTCCCTTTGAAAAAATAAAAAATAAAAATAAAAATAG
CATGCCTGCTATGGTTACACGAAAATCTAACGAAGCCCTTCTCTGAAGATCCTCATTTACGTATCTGGGACTGGGATCCATTTCTCCAATTTAGGGTTTTTGCCTCCCTT
GTACTTTTCTCCCGCAAGTTGTAATAGCACTATCGGCTCTGGTTCTCTTTTGATTTTGATTTCAATTTCAGCTTCTTTTCCGTCGCAACCCTTTCATTCAGGTCGAGAAG
TGTTGCTGAAAACTTTGTCTTCTGATCTACAATGGCTGAACACTTGGCCTCAATATTTGGCACCGAGAAGGACCGTGTCAACTGCCCTTTCTATTTCAAGATCGGCGCCT
GCCGTCATGGAGATCGCTGCTCTCGCCTCCACAACCGCCCTACTATTTCCCCGACTCTTCTCTTATCGAACATGTACCAGCGCCCCGACATGATCACCCCTGGCGTCGAT
GCCCAGGGCCAACCCATAGATCCCCGCAAGATTCAGGAACACTTTGAGGATTTCTACGAAGACATTTACGAGGAACTCGGAAAGTTCGGTGAGATCGAGAGCCTCAACGT
CTGTGATAATCTCGCCGACCACATGATTGGCAATGTGTACGTTCAGTTCAGGGAGGAGGACCAGGCTGCTGCCGCACTCCAAGCGTTGCAGGGGAGGTTCTACTCTGGTC
GACCCATTATCGCAGATTTTTCTCCGGTGACTGATTTCCGCGAGGCCACCTGCCGCCAGTACGAGGAGAATAATTGTAATCGAGGTGGATATTGCAATTTTATGCATGTT
AAGATGATTGGTAAGGATTTGAGGAGGAAGCTGTTCGGTAGGTACCGGGGATATAGGCGGAGCCGGAGCAGGAGTAGAAGTTTGAGTCCGCGGAATCGGAAGGACTACGA
TAGGCGTGAGAGGGATTACAGAGATCGTGACCATCGCGGAAACGGGCGGAGCAAGGAGCGTTACGATAGGTATGATAGGGATGGGGGAAGGAGAAGGCATGGTAGCCCCA
GACGAAGCAGAAGCCCTGTCAGAGAAGGTAGCGAAGAACGCCGAGCCCGTATTGAACAGTGGAACAGAGAAAGGGAGGAGAAGCAGTGACGTCTACTGTGTGCGTGTTCG
TGTTGTTTGGCAGGAACAAGATAGGAAATACGCTTGCTACCAATTCAAATTCTGATTATACTATATCACTATCGATGATGTCCAACTTGTGGGAAGGAGTTACATATGAG
TACGCGTGGGAAGAACTAAGAAGTGAGATTATTGTGCTTTTAGATCGTTGACTGTGAGACAAATAAGGTTTTACTGTGTGCTAGTCAAATTGAATTGATGATTGTTGAAT
ATGTTAAACTGTGTATGGCCTTGTCACTCACATAGCTAGTTTTGAGAGAGAATAATCTTCCAGGGTACCCACTCTTTAGATGTTTGTTTCTAAACTATCAGGAAACTAAG
AGGGGGTTGGTTGTATTTGGAATCTAGTGAAGTTGAACAATTAAGGGCTTAAGTTTTGAAAGTACGTAAGTAAGAAATGGAGGAAGTAGAGCCACGGTACCTTTATGAGA
GAGGGAGAGGGAGAGGTAGATGAGGAAGATAAGATTAACATGAAGCCGCCTTTTGAGTTTTGAGTTCCCTTGCAGTGGCGTGGCTTATCCAGGATTTTGAATTGGTGTGT
GCGAGAGTGAGTGAGTGAGTGGGACTTTAGGGGACGACGTGGGATATAGTTCACTATCTTACCACGTTTGGTTGTTGTCCTTTATATTGTTTCAAACAGTCATTTGTAAC
TAAATTCTGCACCAAGTTTTCTGGGATGAAACTTATAATAAAACTCTAAGATTCACTGGAAGGTGGATGAATGTTGATTTGTCTTTAGTGCACATGTGAGAATACATACT
G
Protein sequenceShow/hide protein sequence
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNVCDNLADHMIG
NVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFGRYRGYRRSRSRSRSLSPRNRKDYDRRERDYRDRD
HRGNGRSKERYDRYDRDGGRRRHGSPRRSRSPVREGSEERRARIEQWNREREEKQ