; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0002323 (gene) of Snake gourd v1 genome

Gene IDTan0002323
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionNuclear transcription factor Y subunit
Genome locationLG09:59520094..59525038
RNA-Seq ExpressionTan0002323
SyntenyTan0002323
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0016602 - CCAAT-binding factor complex (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
InterPro domainsIPR001289 - Nuclear transcription factor Y subunit A
IPR018362 - CCAAT-binding factor, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139033.1 nuclear transcription factor Y subunit A-1 [Cucumis sativus]1.3e-13291.51Show/hide
Query:  MQSKSETNNQLESDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEIQATGSPPSAGSYRQDAQ
        MQSKSETNNQL+S  NGAPSTSIYYEPWWRG+GYN  PLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKE+QATGSP SAGSYRQD Q
Subjt:  MQSKSETNNQLESDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEIQATGSPPSAGSYRQDAQ

Query:  KMLHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
        KM HVSSTLPAMHGECL QSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVG PHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
Subjt:  KMLHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE

Query:  KKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDKVNESGYRLNNGSEQHNGSFLTTKASE
        KK IKARKPYLHESRHQHAIRR+R SGGRFAKK+EA+GKE HSDKVNES YRLN+GSEQ NGS LT KASE
Subjt:  KKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDKVNESGYRLNNGSEQHNGSFLTTKASE

XP_008450422.1 PREDICTED: nuclear transcription factor Y subunit A-1-like isoform X1 [Cucumis melo]5.7e-13391.51Show/hide
Query:  MQSKSETNNQLESDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEIQATGSPPSAGSYRQDAQ
        MQSKSETNNQL  DPNGAPSTSIYYEPWWRG+GYN  PLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKE+QATGSP SAGSYRQD +
Subjt:  MQSKSETNNQLESDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEIQATGSPPSAGSYRQDAQ

Query:  KMLHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
        KM HVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVG PHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
Subjt:  KMLHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE

Query:  KKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDKVNESGYRLNNGSEQHNGSFLTTKASE
        KK IKARKPYLHESRHQHAIRR+R SGGRFAKK+EADGKE HSDKV+ESGYRLN+GSEQ  GS L  KASE
Subjt:  KKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDKVNESGYRLNNGSEQHNGSFLTTKASE

XP_008450423.1 PREDICTED: nuclear transcription factor Y subunit A-1-like isoform X2 [Cucumis melo]5.7e-13391.51Show/hide
Query:  MQSKSETNNQLESDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEIQATGSPPSAGSYRQDAQ
        MQSKSETNNQL  DPNGAPSTSIYYEPWWRG+GYN  PLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKE+QATGSP SAGSYRQD +
Subjt:  MQSKSETNNQLESDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEIQATGSPPSAGSYRQDAQ

Query:  KMLHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
        KM HVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVG PHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
Subjt:  KMLHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE

Query:  KKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDKVNESGYRLNNGSEQHNGSFLTTKASE
        KK IKARKPYLHESRHQHAIRR+R SGGRFAKK+EADGKE HSDKV+ESGYRLN+GSEQ  GS L  KASE
Subjt:  KKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDKVNESGYRLNNGSEQHNGSFLTTKASE

XP_022154358.1 nuclear transcription factor Y subunit A-1-like [Momordica charantia]6.1e-13591.88Show/hide
Query:  MQSKSETNNQLESDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEIQATGSPPSAGSYRQDAQ
        MQSKSETNNQLESDPNGAPSTS+YYEPWWRGIGYNPIPLPVVGGN SSSTSLEFPNGGSESNDGQSVSNND+NDEEDDV+KE+QATGSP SAGSYR DAQ
Subjt:  MQSKSETNNQLESDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEIQATGSPPSAGSYRQDAQ

Query:  KMLHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
        KM HVSSTLPAMHGEC TQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
Subjt:  KMLHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE

Query:  KKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDKVNESGYRLNNGSEQHNGSFLTTKASE
        KKLIKARKPYLHESRHQHAIRRTRGSGGRFAKK+EA+  EMHSDK NESGY LN+GSEQ NGS    KAS+
Subjt:  KKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDKVNESGYRLNNGSEQHNGSFLTTKASE

XP_038879324.1 nuclear transcription factor Y subunit A-1-like [Benincasa hispida]4.8e-13291.88Show/hide
Query:  MQSKSETNNQLESDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEIQATGSPPSAGSYRQDAQ
        MQSKSETNNQL  DPNGAPSTSIYYEPWWRG+GYN  PLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKE+QATGSP SAGSYRQDAQ
Subjt:  MQSKSETNNQLESDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEIQATGSPPSAGSYRQDAQ

Query:  KMLHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
        KM HVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVG PHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
Subjt:  KMLHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE

Query:  KKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDKVNESGYRLNNGSEQHNGSFLTTKASE
        KK IKARKPYLHESRHQHAIRR+R SGGRFAKKNE DGK    DKVNESGYRLN GSEQ NGS LT +ASE
Subjt:  KKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDKVNESGYRLNNGSEQHNGSFLTTKASE

TrEMBL top hitse value%identityAlignment
A0A0A0M2S3 Nuclear transcription factor Y subunit6.1e-13391.51Show/hide
Query:  MQSKSETNNQLESDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEIQATGSPPSAGSYRQDAQ
        MQSKSETNNQL+S  NGAPSTSIYYEPWWRG+GYN  PLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKE+QATGSP SAGSYRQD Q
Subjt:  MQSKSETNNQLESDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEIQATGSPPSAGSYRQDAQ

Query:  KMLHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
        KM HVSSTLPAMHGECL QSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVG PHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
Subjt:  KMLHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE

Query:  KKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDKVNESGYRLNNGSEQHNGSFLTTKASE
        KK IKARKPYLHESRHQHAIRR+R SGGRFAKK+EA+GKE HSDKVNES YRLN+GSEQ NGS LT KASE
Subjt:  KKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDKVNESGYRLNNGSEQHNGSFLTTKASE

A0A1S3BP85 Nuclear transcription factor Y subunit2.8e-13391.51Show/hide
Query:  MQSKSETNNQLESDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEIQATGSPPSAGSYRQDAQ
        MQSKSETNNQL  DPNGAPSTSIYYEPWWRG+GYN  PLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKE+QATGSP SAGSYRQD +
Subjt:  MQSKSETNNQLESDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEIQATGSPPSAGSYRQDAQ

Query:  KMLHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
        KM HVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVG PHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
Subjt:  KMLHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE

Query:  KKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDKVNESGYRLNNGSEQHNGSFLTTKASE
        KK IKARKPYLHESRHQHAIRR+R SGGRFAKK+EADGKE HSDKV+ESGYRLN+GSEQ  GS L  KASE
Subjt:  KKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDKVNESGYRLNNGSEQHNGSFLTTKASE

A0A1S3BPV3 Nuclear transcription factor Y subunit2.8e-13391.51Show/hide
Query:  MQSKSETNNQLESDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEIQATGSPPSAGSYRQDAQ
        MQSKSETNNQL  DPNGAPSTSIYYEPWWRG+GYN  PLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKE+QATGSP SAGSYRQD +
Subjt:  MQSKSETNNQLESDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEIQATGSPPSAGSYRQDAQ

Query:  KMLHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
        KM HVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVG PHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
Subjt:  KMLHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE

Query:  KKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDKVNESGYRLNNGSEQHNGSFLTTKASE
        KK IKARKPYLHESRHQHAIRR+R SGGRFAKK+EADGKE HSDKV+ESGYRLN+GSEQ  GS L  KASE
Subjt:  KKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDKVNESGYRLNNGSEQHNGSFLTTKASE

A0A5D3D5Q2 Nuclear transcription factor Y subunit2.8e-13391.51Show/hide
Query:  MQSKSETNNQLESDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEIQATGSPPSAGSYRQDAQ
        MQSKSETNNQL  DPNGAPSTSIYYEPWWRG+GYN  PLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKE+QATGSP SAGSYRQD +
Subjt:  MQSKSETNNQLESDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEIQATGSPPSAGSYRQDAQ

Query:  KMLHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
        KM HVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVG PHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
Subjt:  KMLHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE

Query:  KKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDKVNESGYRLNNGSEQHNGSFLTTKASE
        KK IKARKPYLHESRHQHAIRR+R SGGRFAKK+EADGKE HSDKV+ESGYRLN+GSEQ  GS L  KASE
Subjt:  KKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDKVNESGYRLNNGSEQHNGSFLTTKASE

A0A6J1DK42 Nuclear transcription factor Y subunit2.9e-13591.88Show/hide
Query:  MQSKSETNNQLESDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEIQATGSPPSAGSYRQDAQ
        MQSKSETNNQLESDPNGAPSTS+YYEPWWRGIGYNPIPLPVVGGN SSSTSLEFPNGGSESNDGQSVSNND+NDEEDDV+KE+QATGSP SAGSYR DAQ
Subjt:  MQSKSETNNQLESDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEIQATGSPPSAGSYRQDAQ

Query:  KMLHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
        KM HVSSTLPAMHGEC TQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
Subjt:  KMLHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE

Query:  KKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDKVNESGYRLNNGSEQHNGSFLTTKASE
        KKLIKARKPYLHESRHQHAIRRTRGSGGRFAKK+EA+  EMHSDK NESGY LN+GSEQ NGS    KAS+
Subjt:  KKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDKVNESGYRLNNGSEQHNGSFLTTKASE

SwissProt top hitse value%identityAlignment
Q84JP1 Nuclear transcription factor Y subunit A-73.5e-2443.2Show/hide
Query:  GSYRQDAQKMLHVSSTLP-AMHGECLTQSTQLELVG--HSIACASNPYQDPYYGGMMAFYGHQPLG--YPMVGAPHARMPLPIEIAQDPVFVNAKQYQGI
        GS+ +  Q+  H    +P A + E +  S      G  +S+A    PY DPYY  + A       G    ++G     +PLP +  ++PVFVNAKQY GI
Subjt:  GSYRQDAQKMLHVSSTLP-AMHGECLTQSTQLELVG--HSIACASNPYQDPYYGGMMAFYGHQPLG--YPMVGAPHARMPLPIEIAQDPVFVNAKQYQGI

Query:  LRRRQARAKAEAEKKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDKVNESGYRLNNG
        LRRRQ+RA+ E++ K+IK+RKPYLHESRH HAIRR RG GGRF    + D  E H D  +E    L+ G
Subjt:  LRRRQARAKAEAEKKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDKVNESGYRLNNG

Q8VY64 Nuclear transcription factor Y subunit A-45.9e-2450.77Show/hide
Query:  TQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYP-----MVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKKLIKARKPYLH
        T S   E + H +     PY DPYY  + A   + P  YP     ++G     +PL  +  ++PVFVNAKQY GILRRRQ+RAK EA  + IKA+KPY+H
Subjt:  TQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYP-----MVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKKLIKARKPYLH

Query:  ESRHQHAIRRTRGSGGRF--AKKNEADGKE
        ESRH HAIRR RG GGRF  AKK   D KE
Subjt:  ESRHQHAIRRTRGSGGRF--AKKNEADGKE

Q93ZH2 Nuclear transcription factor Y subunit A-31.0e-2035.86Show/hide
Query:  IGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEIQATGSPPSAGSYRQDAQKMLHVSSTLPAMHGECLTQ-------STQLE
        I +  +P   V     S+ SL       +S  G   +   ++ ++ D S   Q+TG   +  +   D      +S    A  G  +TQ         Q  
Subjt:  IGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEIQATGSPPSAGSYRQDAQKMLHVSSTLPAMHGECLTQ-------STQLE

Query:  LVG----HSIACASN---PYQDPYYGGMMA--FYGHQPLGYP-MVGAPHARMPLPIEIAQ-DPVFVNAKQYQGILRRRQARAKAEAEKKLIKARKPYLHE
        + G    H     +N    Y DP+YGG++A  +    P   P MV     R+PLP E+ + DPVFVNAKQY  I+RRRQ RAK EA+ KLI+ARKPYLHE
Subjt:  LVG----HSIACASN---PYQDPYYGGMMA--FYGHQPLGYP-MVGAPHARMPLPIEIAQ-DPVFVNAKQYQGILRRRQARAKAEAEKKLIKARKPYLHE

Query:  SRHQHAIRRTRGSGGRF-------AKKNEADGKEMHSDKVNESGYRLNNGS
        SRH HA++R RGSGGRF        +  +A  +E   DK+ +   R  N S
Subjt:  SRHQHAIRRTRGSGGRF-------AKKNEADGKEMHSDKVNESGYRLNNGS

Q945M9 Nuclear transcription factor Y subunit A-92.8e-5048.58Show/hide
Query:  MQSKSET-NNQLESDPNGAPSTSI-YYEPWWR-GIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEIQATGSPPSAGSYRQ
        M SKS++  N+++S+ +G  S+SI    PW R     N       G  +S S +L       ESN  +S SN D     + V+KE Q T SP SAG Y  
Subjt:  MQSKSET-NNQLESDPNGAPSTSI-YYEPWWR-GIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEIQATGSPPSAGSYRQ

Query:  DAQKMLHVSSTLPAMHGECLTQSTQLELVGHSIACA-SNPYQDPYYGGMMAFYGHQPLGY-PMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARA
          Q+ LH   T P  H          +LVGH++  A SNPYQDPYY G+M  YGH PLG+ P  G PH+RMPLP E+AQ+PVFVNAKQYQ ILRRRQARA
Subjt:  DAQKMLHVSSTLPAMHGECLTQSTQLELVGHSIACA-SNPYQDPYYGGMMAFYGHQPLGY-PMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARA

Query:  KAEAEKKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEAD-----GKEMHSDKVNESGYRLNNG-SEQHNGSFLTTKASE
        KAE EKKLIK+RKPYLHESRHQHA+RR RG+GGRFAKK   +      +E  +  V +S    N+   E  NG + T +  E
Subjt:  KAEAEKKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEAD-----GKEMHSDKVNESGYRLNNG-SEQHNGSFLTTKASE

Q9LXV5 Nuclear transcription factor Y subunit A-11.9e-5148.29Show/hide
Query:  MQSKSETNNQLE-SDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDDVSKEIQATGSPPSAGSYRQD
        MQSK    N+ E ++ +      +Y EPWW+   +  +P     G  S+S+SL+ PN GSESND  S S +  +N E D   K+ QA  S  S  ++  +
Subjt:  MQSKSETNNQLE-SDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDDVSKEIQATGSPPSAGSYRQD

Query:  AQKMLHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKA
               + ++  MH + L Q    ELVGH IAC  NPYQDPYYGG+M  YGHQ LG+ P +G P  R  LP+++AQ+PV+VNAKQY+GILRRR+ARAKA
Subjt:  AQKMLHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKA

Query:  EAEKKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDKVNESGYRLN-NGSEQ
        E E+K+I+ RKPYLHESRH+HA+RR R SGGRFAKK+E +  E    +  E G   N +GSEQ
Subjt:  EAEKKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDKVNESGYRLN-NGSEQ

Arabidopsis top hitse value%identityAlignment
AT3G20910.1 nuclear factor Y, subunit A92.0e-5148.58Show/hide
Query:  MQSKSET-NNQLESDPNGAPSTSI-YYEPWWR-GIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEIQATGSPPSAGSYRQ
        M SKS++  N+++S+ +G  S+SI    PW R     N       G  +S S +L       ESN  +S SN D     + V+KE Q T SP SAG Y  
Subjt:  MQSKSET-NNQLESDPNGAPSTSI-YYEPWWR-GIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEIQATGSPPSAGSYRQ

Query:  DAQKMLHVSSTLPAMHGECLTQSTQLELVGHSIACA-SNPYQDPYYGGMMAFYGHQPLGY-PMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARA
          Q+ LH   T P  H          +LVGH++  A SNPYQDPYY G+M  YGH PLG+ P  G PH+RMPLP E+AQ+PVFVNAKQYQ ILRRRQARA
Subjt:  DAQKMLHVSSTLPAMHGECLTQSTQLELVGHSIACA-SNPYQDPYYGGMMAFYGHQPLGY-PMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARA

Query:  KAEAEKKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEAD-----GKEMHSDKVNESGYRLNNG-SEQHNGSFLTTKASE
        KAE EKKLIK+RKPYLHESRHQHA+RR RG+GGRFAKK   +      +E  +  V +S    N+   E  NG + T +  E
Subjt:  KAEAEKKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEAD-----GKEMHSDKVNESGYRLNNG-SEQHNGSFLTTKASE

AT5G12840.1 nuclear factor Y, subunit A11.4e-5248.29Show/hide
Query:  MQSKSETNNQLE-SDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDDVSKEIQATGSPPSAGSYRQD
        MQSK    N+ E ++ +      +Y EPWW+   +  +P     G  S+S+SL+ PN GSESND  S S +  +N E D   K+ QA  S  S  ++  +
Subjt:  MQSKSETNNQLE-SDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDDVSKEIQATGSPPSAGSYRQD

Query:  AQKMLHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKA
               + ++  MH + L Q    ELVGH IAC  NPYQDPYYGG+M  YGHQ LG+ P +G P  R  LP+++AQ+PV+VNAKQY+GILRRR+ARAKA
Subjt:  AQKMLHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKA

Query:  EAEKKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDKVNESGYRLN-NGSEQ
        E E+K+I+ RKPYLHESRH+HA+RR R SGGRFAKK+E +  E    +  E G   N +GSEQ
Subjt:  EAEKKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDKVNESGYRLN-NGSEQ

AT5G12840.2 nuclear factor Y, subunit A12.4e-5248.67Show/hide
Query:  MQSKSETNNQLE-SDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDDVSKEIQATGSPPSAGSYRQD
        MQSK    N+ E ++ +      +Y EPWW+   +  +P     G  S+S+SL+ PN GSESND  S S +  +N E D   K+ QA  S  S     + 
Subjt:  MQSKSETNNQLE-SDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDDVSKEIQATGSPPSAGSYRQD

Query:  AQKMLHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKA
            L + +    MH + L Q    ELVGH IAC  NPYQDPYYGG+M  YGHQ LG+ P +G P  R  LP+++AQ+PV+VNAKQY+GILRRR+ARAKA
Subjt:  AQKMLHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKA

Query:  EAEKKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDKVNESGYRLN-NGSEQ
        E E+K+I+ RKPYLHESRH+HA+RR R SGGRFAKK+E +  E    +  E G   N +GSEQ
Subjt:  EAEKKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDKVNESGYRLN-NGSEQ

AT5G12840.3 nuclear factor Y, subunit A11.4e-5248.29Show/hide
Query:  MQSKSETNNQLE-SDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDDVSKEIQATGSPPSAGSYRQD
        MQSK    N+ E ++ +      +Y EPWW+   +  +P     G  S+S+SL+ PN GSESND  S S +  +N E D   K+ QA  S  S  ++  +
Subjt:  MQSKSETNNQLE-SDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDDVSKEIQATGSPPSAGSYRQD

Query:  AQKMLHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKA
               + ++  MH + L Q    ELVGH IAC  NPYQDPYYGG+M  YGHQ LG+ P +G P  R  LP+++AQ+PV+VNAKQY+GILRRR+ARAKA
Subjt:  AQKMLHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKA

Query:  EAEKKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDKVNESGYRLN-NGSEQ
        E E+K+I+ RKPYLHESRH+HA+RR R SGGRFAKK+E +  E    +  E G   N +GSEQ
Subjt:  EAEKKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDKVNESGYRLN-NGSEQ

AT5G12840.4 nuclear factor Y, subunit A12.4e-5248.67Show/hide
Query:  MQSKSETNNQLE-SDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDDVSKEIQATGSPPSAGSYRQD
        MQSK    N+ E ++ +      +Y EPWW+   +  +P     G  S+S+SL+ PN GSESND  S S +  +N E D   K+ QA  S  S     + 
Subjt:  MQSKSETNNQLE-SDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDDVSKEIQATGSPPSAGSYRQD

Query:  AQKMLHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKA
            L + +    MH + L Q    ELVGH IAC  NPYQDPYYGG+M  YGHQ LG+ P +G P  R  LP+++AQ+PV+VNAKQY+GILRRR+ARAKA
Subjt:  AQKMLHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKA

Query:  EAEKKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDKVNESGYRLN-NGSEQ
        E E+K+I+ RKPYLHESRH+HA+RR R SGGRFAKK+E +  E    +  E G   N +GSEQ
Subjt:  EAEKKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDKVNESGYRLN-NGSEQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGTCAAAGTCTGAAACCAATAATCAGCTCGAATCTGATCCAAATGGTGCTCCATCCACAAGTATCTATTATGAACCCTGGTGGCGTGGTATTGGTTACAATCCTAT
TCCGTTACCTGTAGTAGGGGGAAATGCATCCAGTTCAACTTCTCTTGAATTCCCTAATGGTGGTTCAGAGTCGAATGATGGCCAGTCTGTGTCTAATAATGACGTAAATG
ATGAAGAAGATGATGTTTCCAAAGAAATACAAGCTACTGGATCTCCACCTTCTGCTGGAAGTTACAGACAGGATGCTCAGAAGATGCTGCATGTTTCATCTACATTGCCA
GCTATGCACGGTGAATGTCTGACACAGTCTACACAACTTGAACTTGTTGGCCACTCTATTGCATGTGCGTCAAATCCGTATCAGGATCCATATTATGGAGGAATGATGGC
TTTCTATGGCCATCAGCCCTTGGGCTATCCTATGGTTGGAGCACCACATGCTAGAATGCCATTGCCCATTGAGATAGCACAAGACCCCGTTTTCGTGAATGCGAAGCAGT
ACCAAGGAATTTTGAGGCGAAGGCAAGCACGTGCAAAAGCTGAGGCTGAGAAGAAGTTGATAAAAGCCAGAAAGCCATACCTTCATGAGTCTAGACACCAGCATGCCATA
AGAAGGACGAGGGGTAGTGGAGGGCGTTTCGCCAAGAAAAATGAAGCTGATGGAAAGGAGATGCATTCCGATAAAGTAAACGAGAGTGGTTACCGCCTAAACAACGGTTC
TGAACAGCATAACGGAAGCTTCTTGACGACCAAGGCCTCTGAGTAG
mRNA sequenceShow/hide mRNA sequence
AATTCTCTCCAATTTCTCTTCAACTCCATCAGATTTTCCCCTTTTTCCCCTTTCGGACGTTGCTCGAAATTTCTTTCGGGTTTGAAGGTATGCAGTCAAAGTCTGAAACC
AATAATCAGCTCGAATCTGATCCAAATGGTGCTCCATCCACAAGTATCTATTATGAACCCTGGTGGCGTGGTATTGGTTACAATCCTATTCCGTTACCTGTAGTAGGGGG
AAATGCATCCAGTTCAACTTCTCTTGAATTCCCTAATGGTGGTTCAGAGTCGAATGATGGCCAGTCTGTGTCTAATAATGACGTAAATGATGAAGAAGATGATGTTTCCA
AAGAAATACAAGCTACTGGATCTCCACCTTCTGCTGGAAGTTACAGACAGGATGCTCAGAAGATGCTGCATGTTTCATCTACATTGCCAGCTATGCACGGTGAATGTCTG
ACACAGTCTACACAACTTGAACTTGTTGGCCACTCTATTGCATGTGCGTCAAATCCGTATCAGGATCCATATTATGGAGGAATGATGGCTTTCTATGGCCATCAGCCCTT
GGGCTATCCTATGGTTGGAGCACCACATGCTAGAATGCCATTGCCCATTGAGATAGCACAAGACCCCGTTTTCGTGAATGCGAAGCAGTACCAAGGAATTTTGAGGCGAA
GGCAAGCACGTGCAAAAGCTGAGGCTGAGAAGAAGTTGATAAAAGCCAGAAAGCCATACCTTCATGAGTCTAGACACCAGCATGCCATAAGAAGGACGAGGGGTAGTGGA
GGGCGTTTCGCCAAGAAAAATGAAGCTGATGGAAAGGAGATGCATTCCGATAAAGTAAACGAGAGTGGTTACCGCCTAAACAACGGTTCTGAACAGCATAACGGAAGCTT
CTTGACGACCAAGGCCTCTGAGTAGCACCCTGCCAGCTACTGGAGGTGAATACCAAGACGACAATCAAAACTCGTTCGGGGGATCAATCGCTTGGTTGTAGAAGTAAGTA
CTGCATTCCTGGCAAGTGTGCTAGGCGGCAAATCATTCTTGGCTTTGTTCTGTTCTGATAGTATGTGGAATGATATGTGACTTGCAGGATCTCATGGCTTCAAAGGATTC
TTTAAAGTCTAGGATTTCTTCCTTCCATTCTCTCTCTCTTTTTTTTTTGGCCTTTTTGTACAGAGTTTATGATGACTTAAGGGAGTGGAATGTTTGACCTTTTGTATTAT
ATAGCAGAGTGAAACTAAATGAATCATAAGGCTTAGGATGGATATAGATTGTGATTCACAAAGCTTACTCTTGAAAGATTTTAGATATTTATATCTAAGGTGGACAGATT
ATTGGTGCAAATTATAATTTTCAGGTGAAAAAATGGGTGGAGTTTAAAAGCC
Protein sequenceShow/hide protein sequence
MQSKSETNNQLESDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEIQATGSPPSAGSYRQDAQKMLHVSSTLP
AMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKKLIKARKPYLHESRHQHAI
RRTRGSGGRFAKKNEADGKEMHSDKVNESGYRLNNGSEQHNGSFLTTKASE