; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0002341 (gene) of Snake gourd v1 genome

Gene IDTan0002341
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionRibosomal protein L2
Genome locationContig00127:125509..127035
RNA-Seq ExpressionTan0002341
SyntenyTan0002341
Gene Ontology termsGO:0032543 - mitochondrial translation (biological process)
GO:0005762 - mitochondrial large ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR002171 - Ribosomal protein L2
IPR012340 - Nucleic acid-binding, OB-fold
IPR022666 - Ribosomal Proteins L2, RNA binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
OVA06704.1 Ribosomal protein L2 [Macleaya cordata]1.6e-16579.46Show/hide
Query:  MRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRRIDLKRSTSSMGIVERIEYDPNRSSRIAPVRWIEGV---RQRKCKTIEEFAPPRKIL
        MRQS +GRALRQFTLSTGKSA RNSSGRITVFHRGGGSKRLQRRIDLKRSTSSM IVERIEYDPN SSRIA VRWIEGV   RQRKC TIEEFAP  KIL
Subjt:  MRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRRIDLKRSTSSMGIVERIEYDPNRSSRIAPVRWIEGV---RQRKCKTIEEFAPPRKIL

Query:  EPTTTTIRGLFSFSSPPGKVDQRKVACFSPGLMAAYVVVGLPTRMPPWSKSPFTSTSKGAGSKKTCAKDVFFSAFSSQKTKGETASLSFGSSFGFPRIAV
        EPTT TIR LFSFSS PGKVDQRKVACFSPGLMAAYVVVGLPTRMPPWSKS        AGSKKTCAKDVFFSA SS K KGETASLSFGSSF FPRIAV
Subjt:  EPTTTTIRGLFSFSSPPGKVDQRKVACFSPGLMAAYVVVGLPTRMPPWSKSPFTSTSKGAGSKKTCAKDVFFSAFSSQKTKGETASLSFGSSFGFPRIAV

Query:  AGAKPAFFAPRMRDKLRGKNTFSLCEVRKWRTHSILWAHRIKRKAALSWRSFRRQETLGLVGGAEHNESKPETDQGSLPAKPIGEGPKDGACKVNRAPVL
        AGAKPAFFAPRMR+KLRGKNTFSLCEVRKWRTHSILWAHRIKRKAALSW+SFRRQETLGLVG AEHNESKP+TDQGSLPAKPIGEGPKDGACKV+RAPV+
Subjt:  AGAKPAFFAPRMRDKLRGKNTFSLCEVRKWRTHSILWAHRIKRKAALSWRSFRRQETLGLVGGAEHNESKPETDQGSLPAKPIGEGPKDGACKVNRAPVL

Query:  ------------------TSKHLIG------------ERGNAH----EAPAEREGLPGRMPMGAGFFEKARADSETWDLGLATNEGELFELSPPVAYVVV
                           S   +G             +G  H    ++PAEREGLPGRMPMGAGFFEKARADSETWDLGLATNEG+L ELSPP AYVVV
Subjt:  ------------------TSKHLIG------------ERGNAH----EAPAEREGLPGRMPMGAGFFEKARADSETWDLGLATNEGELFELSPPVAYVVV

Query:  GRQK
        G+ K
Subjt:  GRQK

XP_023521202.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111784913 [Cucurbita pepo subsp. pepo]5.2e-18587.09Show/hide
Query:  MITISTMRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRRIDLKRSTSSMGIVERIEYDPNRSSRIAPVRWIEGVRQRKCKTIEEFAPPR
        MI ISTMRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRRIDLKRSTSSMGIVERIEYDPNRSSRIAPVRWIEGVRQRKCKTIEEFAPPR
Subjt:  MITISTMRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRRIDLKRSTSSMGIVERIEYDPNRSSRIAPVRWIEGVRQRKCKTIEEFAPPR

Query:  KILEPTTTTIRGLFSFSSPPGKVDQRKVACFSPGLMAAYVVVGLPTRMPPWSKSPFTSTSKGAGSKKTCAKDVFFSAFSSQKTKGETASLSFGSSFGFPR
        KILEPTTTTI GLFSFSS PGKVDQRKVACFSPG +AAYVVVGLPTR+PP SKSPF  TSKGAGSKKTCAKDVFFSAFSSQKTKGETASLSFGS  GFPR
Subjt:  KILEPTTTTIRGLFSFSSPPGKVDQRKVACFSPGLMAAYVVVGLPTRMPPWSKSPFTSTSKGAGSKKTCAKDVFFSAFSSQKTKGETASLSFGSSFGFPR

Query:  IAVAGAKPAFFAPRMRDKLRGKNTFSLCEVRKWRTHSILWAHRIKRKAALSWRSFRRQETLGLVGGAEHNESKPETDQGSLPAKPIGEGPKDGACKVNRA
        I VAGA PAFFAPRMR+K+RG NTFSLCEV KWRTHSILWAHR+KRKAAL W+SFRRQET GLVGGAEHNESKPETD  SLPAKPIGEGPKDGACKVN  
Subjt:  IAVAGAKPAFFAPRMRDKLRGKNTFSLCEVRKWRTHSILWAHRIKRKAALSWRSFRRQETLGLVGGAEHNESKPETDQGSLPAKPIGEGPKDGACKVNRA

Query:  ------------PVLTSK--------HLIGERGNAHEAPAEREGLPGRMPMGAGFFEKARADSETWDLGLATNEGELFELSPPVAYVVVGRQKAR
                    P  +S+        +LIGERGNAHEAPAEREGLPGRMPMGAGFFEKARADSETWDLGLATNEGEL ELSPPVAYVVVGRQKAR
Subjt:  ------------PVLTSK--------HLIGERGNAHEAPAEREGLPGRMPMGAGFFEKARADSETWDLGLATNEGELFELSPPVAYVVVGRQKAR

XP_027185391.1 LOW QUALITY PROTEIN: uncharacterized protein LOC113783450 [Coffea eugenioides]5.6e-16383.7Show/hide
Query:  MRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRRIDLKRSTSSMGIVERIEYDPNRSSRIAPVRWIEGVRQRKCKTIEEFAPPRKILEPT
        MRQ +E   LRQFT STG+SAGRNSSGRITVFHRGGGSKRLQRRIDLKRSTSSMGIVERIEYDPNRSSRIA VRW EGVR+RKC TIEEFAPPRKI E T
Subjt:  MRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRRIDLKRSTSSMGIVERIEYDPNRSSRIAPVRWIEGVRQRKCKTIEEFAPPRKILEPT

Query:  TTTIRGLFSFSSPPGKVDQRKVACFSPGLMAAYVVVGLPTRMPPWSKSPFTSTSKGAGSKKTCAKDVFFSAFSSQKTKGETASLSFGSSFGFPRIAVAGA
        TT IRG FSFSS PGKVDQRKVACFSPGLMAAYVVVGLPTRMP WSKSPF  TSKGAGSKKTCAKD+FFSAFSS K KGETASLSFGSSF FPRIAVAGA
Subjt:  TTTIRGLFSFSSPPGKVDQRKVACFSPGLMAAYVVVGLPTRMPPWSKSPFTSTSKGAGSKKTCAKDVFFSAFSSQKTKGETASLSFGSSFGFPRIAVAGA

Query:  KPAFFAPRMRDKLRGKNTFSLCEVRKWRTHSILWAHRIKRKAALSWRSFRRQETLGLVGGAEHNESKPETDQGSLPAKPIGEGPKDGACKVNRA------
        KPAFFAPRM+ K+RGKNTFSLCE+RKWRTHSILWAHRIKRKAALSW+SFRRQETLGLVG +EHN+SKP+ DQGSLPAKPIGEG KDG CKV+        
Subjt:  KPAFFAPRMRDKLRGKNTFSLCEVRKWRTHSILWAHRIKRKAALSWRSFRRQETLGLVGGAEHNESKPETDQGSLPAKPIGEGPKDGACKVNRA------

Query:  ------PVLTSK-------HLIGERGNAHEAPAEREGLPGRMPMGAGFFEKARADSETWDLGLATNEG
              PV +S+       HLIGERGNAHEAPAEREGLPGRMPMGAGFFEKARADSETWDLGLATNEG
Subjt:  ------PVLTSK-------HLIGERGNAHEAPAEREGLPGRMPMGAGFFEKARADSETWDLGLATNEG

XP_042504770.1 LOW QUALITY PROTEIN: 60S ribosomal protein L2, mitochondrial [Macadamia integrifolia]5.2e-16984.35Show/hide
Query:  MITISTMRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRRIDLKRSTSSMGIVERIEYDPNRSSRIAPVRWIEGV---RQRKCKTIEEFA
        MIT  TMRQS +GRALRQFT  TGKSAGRNSSGRITVFHRGGGSKRLQRRIDLKRSTSSMGIVERIEYDPNRSSRIAPVRWIEGV   RQRKC TIEEFA
Subjt:  MITISTMRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRRIDLKRSTSSMGIVERIEYDPNRSSRIAPVRWIEGV---RQRKCKTIEEFA

Query:  PPRKILEPTTTTIRGLFSFSSPPGKVDQRKVACFSPGLMAAYVVVGLPTRMPPWSKSPFTSTSKGAGSKKTCAKDVFFSAFSSQKTKGETASLSFGSSFG
        PPRKILEPTTTTIRGLFSFSS PGKVDQRKVACFSPGLMAAYVVVGLPTRMPPWSKS        AG    CAKDVFFSA SS K KGETASLSFGSSFG
Subjt:  PPRKILEPTTTTIRGLFSFSSPPGKVDQRKVACFSPGLMAAYVVVGLPTRMPPWSKSPFTSTSKGAGSKKTCAKDVFFSAFSSQKTKGETASLSFGSSFG

Query:  FPRIAVAGAKPAFFAPRMRDKLRGKNTFSLCEVRKWRTHSILWAHRIKRKAALSWRSFRRQETLGLVGGAEHNESKPETDQGSLPAKPIGEGPKDGACKV
        FPRIAVAGAKPAFFAPRMR+K+RGKNTFSLCEVRKWRTHSILWAHRIKRKAALSW+SFRRQET GLVG AEHNESKP+TDQGSLPAKPIGEGPKDGACKV
Subjt:  FPRIAVAGAKPAFFAPRMRDKLRGKNTFSLCEVRKWRTHSILWAHRIKRKAALSWRSFRRQETLGLVGGAEHNESKPETDQGSLPAKPIGEGPKDGACKV

Query:  -------------------NRAPVLTSKHLIGERGNAHEAPAEREGLPGRMPMGAGFFEKARADSETWDLGLATNEG
                           +R+      HLIGERGNAHEAPAEREGLPGRMPMGAGFFEKARADSETWDLGLATNEG
Subjt:  -------------------NRAPVLTSKHLIGERGNAHEAPAEREGLPGRMPMGAGFFEKARADSETWDLGLATNEG

YP_009913619.1 ribosomal protein L2 [Luffa acutangula]1.8e-16198.65Show/hide
Query:  MRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRRIDLKRSTSSMGIVERIEYDPNRSSRIAPVRWIEGVRQRKCKTIEEFAPPRKILEPT
        MRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQR ID KRSTSSMGIVERIEYDPNRSSRIAPVRWIEGVRQRKCKTIEEFAPPRKILEPT
Subjt:  MRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRRIDLKRSTSSMGIVERIEYDPNRSSRIAPVRWIEGVRQRKCKTIEEFAPPRKILEPT

Query:  TTTIRGLFSFSSPPGKVDQRKVACFSPGLMAAYVVVGLPTRMPPWSKSPFTSTSKGAGSKKTCAKDVFFSAFSSQKTKGETASLSFGSSFGFPRIAVAGA
        TTTIRGLFSFSSPPGKVDQRKVACFSPGLMAAYVVVGLPTRMPPWSKSPFTSTSKGAGSKKTCAKDVFFSAFSSQKTKGETASLSFGSSFGFPRIAVAGA
Subjt:  TTTIRGLFSFSSPPGKVDQRKVACFSPGLMAAYVVVGLPTRMPPWSKSPFTSTSKGAGSKKTCAKDVFFSAFSSQKTKGETASLSFGSSFGFPRIAVAGA

Query:  KPAFFAPRMRDKLRGKNTFSLCEVRKWRTHSILWAHRIKRKAALSWRSFRRQETLGLVGGAEHNESKPETDQGSLPAKPIGEGPKDGACKVNRAPV
        KPAFFAPRMR+KLRGKNTFSLCEVRKWRTHSILWAHR+KRKAALSWRSFRRQETLGLVGGAEHNESKPETDQGSLPAKPIGEGPKDGACKVNRAPV
Subjt:  KPAFFAPRMRDKLRGKNTFSLCEVRKWRTHSILWAHRIKRKAALSWRSFRRQETLGLVGGAEHNESKPETDQGSLPAKPIGEGPKDGACKVNRAPV

TrEMBL top hitse value%identityAlignment
A0A200Q8E8 Ribosomal protein L27.6e-16679.46Show/hide
Query:  MRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRRIDLKRSTSSMGIVERIEYDPNRSSRIAPVRWIEGV---RQRKCKTIEEFAPPRKIL
        MRQS +GRALRQFTLSTGKSA RNSSGRITVFHRGGGSKRLQRRIDLKRSTSSM IVERIEYDPN SSRIA VRWIEGV   RQRKC TIEEFAP  KIL
Subjt:  MRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRRIDLKRSTSSMGIVERIEYDPNRSSRIAPVRWIEGV---RQRKCKTIEEFAPPRKIL

Query:  EPTTTTIRGLFSFSSPPGKVDQRKVACFSPGLMAAYVVVGLPTRMPPWSKSPFTSTSKGAGSKKTCAKDVFFSAFSSQKTKGETASLSFGSSFGFPRIAV
        EPTT TIR LFSFSS PGKVDQRKVACFSPGLMAAYVVVGLPTRMPPWSKS        AGSKKTCAKDVFFSA SS K KGETASLSFGSSF FPRIAV
Subjt:  EPTTTTIRGLFSFSSPPGKVDQRKVACFSPGLMAAYVVVGLPTRMPPWSKSPFTSTSKGAGSKKTCAKDVFFSAFSSQKTKGETASLSFGSSFGFPRIAV

Query:  AGAKPAFFAPRMRDKLRGKNTFSLCEVRKWRTHSILWAHRIKRKAALSWRSFRRQETLGLVGGAEHNESKPETDQGSLPAKPIGEGPKDGACKVNRAPVL
        AGAKPAFFAPRMR+KLRGKNTFSLCEVRKWRTHSILWAHRIKRKAALSW+SFRRQETLGLVG AEHNESKP+TDQGSLPAKPIGEGPKDGACKV+RAPV+
Subjt:  AGAKPAFFAPRMRDKLRGKNTFSLCEVRKWRTHSILWAHRIKRKAALSWRSFRRQETLGLVGGAEHNESKPETDQGSLPAKPIGEGPKDGACKVNRAPVL

Query:  ------------------TSKHLIG------------ERGNAH----EAPAEREGLPGRMPMGAGFFEKARADSETWDLGLATNEGELFELSPPVAYVVV
                           S   +G             +G  H    ++PAEREGLPGRMPMGAGFFEKARADSETWDLGLATNEG+L ELSPP AYVVV
Subjt:  ------------------TSKHLIG------------ERGNAH----EAPAEREGLPGRMPMGAGFFEKARADSETWDLGLATNEGELFELSPPVAYVVV

Query:  GRQK
        G+ K
Subjt:  GRQK

A0A5C2I4L3 Ribosomal protein L22.6e-15092.33Show/hide
Query:  MRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRRIDLKRSTSSMGIVERIEYDPNRSSRIAPVRWIEGV---RQRKCKTIEEFAPPRKIL
        MRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRRIDLKRSTSSMGIVERIEYDPNRSSRIAPVRWIEGV   RQRKC TIEEFAPPRKIL
Subjt:  MRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRRIDLKRSTSSMGIVERIEYDPNRSSRIAPVRWIEGV---RQRKCKTIEEFAPPRKIL

Query:  EPTTTTIRGLFSFSSPPGKVDQRKVACFSPGLMAAYVVVGLPTRMPPWSKSPFTSTSKGAGSKKTCAKDVFFSAFSSQKTKGETASLSFGSSFGFPRIAV
        EPTTTTIRG FSFSS PGKVDQRKVACFSPGLMAAYVVVGLPTRMPPWSKSP   TSKGAGS+KTCAKDVFFSA SS K KGETASLSFGSSF FPRIAV
Subjt:  EPTTTTIRGLFSFSSPPGKVDQRKVACFSPGLMAAYVVVGLPTRMPPWSKSPFTSTSKGAGSKKTCAKDVFFSAFSSQKTKGETASLSFGSSFGFPRIAV

Query:  AGAKPAFFAPRMRDKLRGKNTFSLCEVRKWRTHSILWAHRIKRKAALSWRSFRRQETLGLVGGAEHNESKPETDQGSLPAKPIGEGPKDGACKVNRAPVL
        AGAKPAFFAPRMR+K+RGKNTFSLCE+RKWRTHSILWAHRIKRKAALSW+SFRRQETLGLVG AEHNESKP+TDQGSLPAKPIGEGPKDG CKV+RAPV+
Subjt:  AGAKPAFFAPRMRDKLRGKNTFSLCEVRKWRTHSILWAHRIKRKAALSWRSFRRQETLGLVGGAEHNESKPETDQGSLPAKPIGEGPKDGACKVNRAPVL

A0A7D5XZ32 Ribosomal protein L28.7e-16298.65Show/hide
Query:  MRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRRIDLKRSTSSMGIVERIEYDPNRSSRIAPVRWIEGVRQRKCKTIEEFAPPRKILEPT
        MRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQR ID KRSTSSMGIVERIEYDPNRSSRIAPVRWIEGVRQRKCKTIEEFAPPRKILEPT
Subjt:  MRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRRIDLKRSTSSMGIVERIEYDPNRSSRIAPVRWIEGVRQRKCKTIEEFAPPRKILEPT

Query:  TTTIRGLFSFSSPPGKVDQRKVACFSPGLMAAYVVVGLPTRMPPWSKSPFTSTSKGAGSKKTCAKDVFFSAFSSQKTKGETASLSFGSSFGFPRIAVAGA
        TTTIRGLFSFSSPPGKVDQRKVACFSPGLMAAYVVVGLPTRMPPWSKSPFTSTSKGAGSKKTCAKDVFFSAFSSQKTKGETASLSFGSSFGFPRIAVAGA
Subjt:  TTTIRGLFSFSSPPGKVDQRKVACFSPGLMAAYVVVGLPTRMPPWSKSPFTSTSKGAGSKKTCAKDVFFSAFSSQKTKGETASLSFGSSFGFPRIAVAGA

Query:  KPAFFAPRMRDKLRGKNTFSLCEVRKWRTHSILWAHRIKRKAALSWRSFRRQETLGLVGGAEHNESKPETDQGSLPAKPIGEGPKDGACKVNRAPV
        KPAFFAPRMR+KLRGKNTFSLCEVRKWRTHSILWAHR+KRKAALSWRSFRRQETLGLVGGAEHNESKPETDQGSLPAKPIGEGPKDGACKVNRAPV
Subjt:  KPAFFAPRMRDKLRGKNTFSLCEVRKWRTHSILWAHRIKRKAALSWRSFRRQETLGLVGGAEHNESKPETDQGSLPAKPIGEGPKDGACKVNRAPV

D5I399 Ribosomal protein L21.1e-15998.31Show/hide
Query:  MRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRRIDLKRSTSSMGIVERIEYDPNRSSRIAPVRWIEGVRQRKCKTIEEFAPPRKILEPT
        MRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRRIDLKRSTSSMGIVERIEYDPNRSSRIA VRWIEGVRQRKCKTIEEFAPPRKILEPT
Subjt:  MRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRRIDLKRSTSSMGIVERIEYDPNRSSRIAPVRWIEGVRQRKCKTIEEFAPPRKILEPT

Query:  TTTIRGLFSFSSPPGKVDQRKVACFSPGLMAAYVVVGLPTRMPPWSKSPFTSTSKGAGSKKTCAKDVFFSAFSSQKTKGETASLSFGSSFGFPRIAVAGA
        TTTIRGLFSFSSPPGKVDQRKVACFSPG MAAYVVVGLPTRMPPWSKSPF  TSKGAGSKKTCAKDVFFSAFSSQKTKGETASLSFGSSFGFPR+AVAGA
Subjt:  TTTIRGLFSFSSPPGKVDQRKVACFSPGLMAAYVVVGLPTRMPPWSKSPFTSTSKGAGSKKTCAKDVFFSAFSSQKTKGETASLSFGSSFGFPRIAVAGA

Query:  KPAFFAPRMRDKLRGKNTFSLCEVRKWRTHSILWAHRIKRKAALSWRSFRRQETLGLVGGAEHNESKPETDQGSLPAKPIGEGPKDGACKVNRAPV
        KPAFFAPRMRDKLRGKNTFSLCEVRKWRTHSILWAHRIKRKAALSWRSFRRQETLGLVGGAEHNESKPETDQGSLPAKPIGEGPKDGACKVNRAPV
Subjt:  KPAFFAPRMRDKLRGKNTFSLCEVRKWRTHSILWAHRIKRKAALSWRSFRRQETLGLVGGAEHNESKPETDQGSLPAKPIGEGPKDGACKVNRAPV

D5I3E9 Ribosomal protein L28.2e-15294.59Show/hide
Query:  MRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRRIDLKRSTSSMGIVERIEYDPNRSSRIAPVRWIEGVRQRKCKTIEEFAPPRKILEPT
        MRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRRIDLKRSTSSMGIVERIEYDPNRSSRIA VRWIEGVRQRKCKTIEEFAPPRKILEPT
Subjt:  MRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRRIDLKRSTSSMGIVERIEYDPNRSSRIAPVRWIEGVRQRKCKTIEEFAPPRKILEPT

Query:  TTTIRGLFSFSSPPGKVDQRKVACFSPGLMAAYVVVGLPTRMPPWSKSPFTSTSKGAGSKKTCAKDVFFSAFSSQKTKGETASLSFGSSFGFPRIAVAGA
        TTTIRGLFSFSS PGKVDQRKVACFSPG MAAYVVVGLPTR+PP SKSPF  TSKGAGSKKTCAKDVFFSAFSSQKTKGETASLSFGSS GFPRIAVAGA
Subjt:  TTTIRGLFSFSSPPGKVDQRKVACFSPGLMAAYVVVGLPTRMPPWSKSPFTSTSKGAGSKKTCAKDVFFSAFSSQKTKGETASLSFGSSFGFPRIAVAGA

Query:  KPAFFAPRMRDKLRGKNTFSLCEVRKWRTHSILWAHRIKRKAALSWRSFRRQETLGLVGGAEHNESKPETDQGSLPAKPIGEGPKDGACKVNRAPV
        KPAFFAPRMR+K+RGKNTFSLCEVRKWRTHSILWAHR+KRKAAL W+SFRRQET GLVGGAEHNESKPETD  SLPAKPIGEGPKDGACKVNRAPV
Subjt:  KPAFFAPRMRDKLRGKNTFSLCEVRKWRTHSILWAHRIKRKAALSWRSFRRQETLGLVGGAEHNESKPETDQGSLPAKPIGEGPKDGACKVNRAPV

SwissProt top hitse value%identityAlignment
P0C8K6 60S ribosomal protein L2, mitochondrial3.6e-8857.79Show/hide
Query:  MRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRRIDLKRSTSSMGIVERIEYDPNRSSRIAPVRWIEGV---RQRKCKTIEEFAPPRKIL
        MRQS +GRALR FTLSTGKSAGRNSSGRITVFHRGGGSKRLQR+IDLKRSTSS+GIVERIEYDPNRSSRIA VRWIEGV   RQRK KTIEEFA PRKIL
Subjt:  MRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRRIDLKRSTSSMGIVERIEYDPNRSSRIAPVRWIEGV---RQRKCKTIEEFAPPRKIL

Query:  EPTTTTIRGLFSFSSPPGKVDQRKVACFSPGLMAAYVVVGLPTRMPPWSKSPFTSTSKGAGSKKTCAKDVFFSAFSSQKTKGETASLSFGSSFGFPRIAV
        E TT TI  LFSFSS                                                            SS   +GETASLSFGSS GFPRIAV
Subjt:  EPTTTTIRGLFSFSSPPGKVDQRKVACFSPGLMAAYVVVGLPTRMPPWSKSPFTSTSKGAGSKKTCAKDVFFSAFSSQKTKGETASLSFGSSFGFPRIAV

Query:  AGAKPAFFAPRMRDKLRGKNTFSLCEVRKWRTHSILWAHRIKRKAALSWRSFRRQETLGLVGGAEHNESKPETDQ-------------------------
        AGAKPAFFA RMR+K  GK TFSLCE+RKWRTH +LWAHRIKRKAALSW+S R+Q+TL LVG AEHNESK + DQ                         
Subjt:  AGAKPAFFAPRMRDKLRGKNTFSLCEVRKWRTHSILWAHRIKRKAALSWRSFRRQETLGLVGGAEHNESKPETDQ-------------------------

Query:  --------------GSLPAK-PIGEGPKDGACKVNRAPV--LTSKHLIGERGN
                      GSLPAK PIGEGPKDGA KV+RAPV  + + H + E GN
Subjt:  --------------GSLPAK-PIGEGPKDGACKVNRAPV--LTSKHLIGERGN

P26859 60S ribosomal protein L2, mitochondrial1.3e-3244.88Show/hide
Query:  EGRALRQFTLSTGK-SAGRNSSGRITVFHRGGGSKRLQRRIDLKRSTSSMGIVERIEYDPNRSSRIAPVRWIEGVRQRKCKTIEEFAPPRKILEPTTTTI
        +G+AL+Q T    + SAGRNSSGRITVFHRGGGSKRLQR+ID KRSTSSMGIVERIEYDPNRSS IA VRWIEGV +   +     A  R+  E      
Subjt:  EGRALRQFTLSTGK-SAGRNSSGRITVFHRGGGSKRLQRRIDLKRSTSSMGIVERIEYDPNRSSRIAPVRWIEGVRQRKCKTIEEFAPPRKILEPTTTTI

Query:  RGLFSFSSPPGKVDQRKVACFSPGLMAAYVVVGLPTR-MPPWSKSPFTSTSKGAGSKKTCAKDVFFSAFSSQKTKGETASLSFGSSFGFPRIAVAGAKPA
          LFSFSS P +  + K                  TR + P  +     +S   G++   AK+V                   GS  G P IAVAGAKPA
Subjt:  RGLFSFSSPPGKVDQRKVACFSPGLMAAYVVVGLPTR-MPPWSKSPFTSTSKGAGSKKTCAKDVFFSAFSSQKTKGETASLSFGSSFGFPRIAVAGAKPA

Query:  FFAPRMR-----------DKLRGKNTFSLCEVRKWRTHSILWAHRIKRKAALSW
        FFA RM+             LRG+NTFS  E ++W+T S   A R ++   LSW
Subjt:  FFAPRMR-----------DKLRGKNTFSLCEVRKWRTHSILWAHRIKRKAALSW

P92812 60S ribosomal protein L2, mitochondrial3.6e-8857.79Show/hide
Query:  MRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRRIDLKRSTSSMGIVERIEYDPNRSSRIAPVRWIEGV---RQRKCKTIEEFAPPRKIL
        MRQS +GRALR FTLSTGKSAGRNSSGRITVFHRGGGSKRLQR+IDLKRSTSS+GIVERIEYDPNRSSRIA VRWIEGV   RQRK KTIEEFA PRKIL
Subjt:  MRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRRIDLKRSTSSMGIVERIEYDPNRSSRIAPVRWIEGV---RQRKCKTIEEFAPPRKIL

Query:  EPTTTTIRGLFSFSSPPGKVDQRKVACFSPGLMAAYVVVGLPTRMPPWSKSPFTSTSKGAGSKKTCAKDVFFSAFSSQKTKGETASLSFGSSFGFPRIAV
        E TT TI  LFSFSS                                                            SS   +GETASLSFGSS GFPRIAV
Subjt:  EPTTTTIRGLFSFSSPPGKVDQRKVACFSPGLMAAYVVVGLPTRMPPWSKSPFTSTSKGAGSKKTCAKDVFFSAFSSQKTKGETASLSFGSSFGFPRIAV

Query:  AGAKPAFFAPRMRDKLRGKNTFSLCEVRKWRTHSILWAHRIKRKAALSWRSFRRQETLGLVGGAEHNESKPETDQ-------------------------
        AGAKPAFFA RMR+K  GK TFSLCE+RKWRTH +LWAHRIKRKAALSW+S R+Q+TL LVG AEHNESK + DQ                         
Subjt:  AGAKPAFFAPRMRDKLRGKNTFSLCEVRKWRTHSILWAHRIKRKAALSWRSFRRQETLGLVGGAEHNESKPETDQ-------------------------

Query:  --------------GSLPAK-PIGEGPKDGACKVNRAPV--LTSKHLIGERGN
                      GSLPAK PIGEGPKDGA KV+RAPV  + + H + E GN
Subjt:  --------------GSLPAK-PIGEGPKDGACKVNRAPV--LTSKHLIGERGN

P93311 60S ribosomal protein L2, mitochondrial2.6e-12680Show/hide
Query:  RALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRRIDLKRSTSSMGIVERIEYDPNRSSRIAPVRWIEGVRQRKCKTIEEFAPPRKILEPTTTTIRGL
        RALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRL RRIDLKRSTSSMGIVE IEYDPNRSS+IAPVRWI+G  Q+K  TIE+FAPPRKILEPTT TI GL
Subjt:  RALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRRIDLKRSTSSMGIVERIEYDPNRSSRIAPVRWIEGVRQRKCKTIEEFAPPRKILEPTTTTIRGL

Query:  FSFSSPPGKVDQRKVACFSPGLMAAYVVVGLPTRMPPWSKSPFTSTSKGAGSKKTCAKDVFFSAFSSQKTKGETASLSFGSSFGFPRIAVAGAKPAFFAP
        FSFS  PGKVD+RKVACFSPGLMAAYVVVGLPT MPP S S     SKGAGS KT  KDVFFSAFSS K K ETASL+F SSFGFPRIAVAGAKPAFFAP
Subjt:  FSFSSPPGKVDQRKVACFSPGLMAAYVVVGLPTRMPPWSKSPFTSTSKGAGSKKTCAKDVFFSAFSSQKTKGETASLSFGSSFGFPRIAVAGAKPAFFAP

Query:  RMRDKLRGKNTFSLCEVRKWRTHSILWAHRIKRKAALSWRSFRRQETLGLVGGAEHNESKPETDQGSLPAKPIGE-----------GPKDGACKVNRAPV
        RMR K+RGK+TFSLCEV+K RTHSILWAHRIK KA LSW+SFRRQ+TLGLVG A H +SKP+TDQG+LPAKPIGE             KDGACKV+RAPV
Subjt:  RMRDKLRGKNTFSLCEVRKWRTHSILWAHRIKRKAALSWRSFRRQETLGLVGGAEHNESKPETDQGSLPAKPIGE-----------GPKDGACKVNRAPV

Q2F969 60S ribosomal protein L2, mitochondrial3.6e-8857.79Show/hide
Query:  MRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRRIDLKRSTSSMGIVERIEYDPNRSSRIAPVRWIEGV---RQRKCKTIEEFAPPRKIL
        MRQS +GRALR FTLSTGKSAGRNSSGRITVFHRGGGSKRLQR+IDLKRSTSS+GIVERIEYDPNRSSRIA VRWIEGV   RQRK KTIEEFA PRKIL
Subjt:  MRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRRIDLKRSTSSMGIVERIEYDPNRSSRIAPVRWIEGV---RQRKCKTIEEFAPPRKIL

Query:  EPTTTTIRGLFSFSSPPGKVDQRKVACFSPGLMAAYVVVGLPTRMPPWSKSPFTSTSKGAGSKKTCAKDVFFSAFSSQKTKGETASLSFGSSFGFPRIAV
        E TT TI  LFSFSS                                                            SS   +GETASLSFGSS GFPRIAV
Subjt:  EPTTTTIRGLFSFSSPPGKVDQRKVACFSPGLMAAYVVVGLPTRMPPWSKSPFTSTSKGAGSKKTCAKDVFFSAFSSQKTKGETASLSFGSSFGFPRIAV

Query:  AGAKPAFFAPRMRDKLRGKNTFSLCEVRKWRTHSILWAHRIKRKAALSWRSFRRQETLGLVGGAEHNESKPETDQ-------------------------
        AGAKPAFFA RMR+K  GK TFSLCE+RKWRTH +LWAHRIKRKAALSW+S R+Q+TL LVG AEHNESK + DQ                         
Subjt:  AGAKPAFFAPRMRDKLRGKNTFSLCEVRKWRTHSILWAHRIKRKAALSWRSFRRQETLGLVGGAEHNESKPETDQ-------------------------

Query:  --------------GSLPAK-PIGEGPKDGACKVNRAPV--LTSKHLIGERGN
                      GSLPAK PIGEGPKDGA KV+RAPV  + + H + E GN
Subjt:  --------------GSLPAK-PIGEGPKDGACKVNRAPV--LTSKHLIGERGN

Arabidopsis top hitse value%identityAlignment
AT2G07715.1 Nucleic acid-binding, OB-fold-like protein1.3e-14976.28Show/hide
Query:  RALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRRIDLKRSTSSMGIVERIEYDPNRSSRIAPVRWIEGVRQRKCKTIEEFAPPRKILEPTTTTIRGL
        RALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRL RRIDLKRSTSSMGIVE IEYDPNRSS+IAPVRWI+G  Q+K  TIE+FAPPRKILEPTT TI GL
Subjt:  RALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRRIDLKRSTSSMGIVERIEYDPNRSSRIAPVRWIEGVRQRKCKTIEEFAPPRKILEPTTTTIRGL

Query:  FSFSSPPGKVDQRKVACFSPGLMAAYVVVGLPTRMPPWSKSPFTSTSKGAGSKKTCAKDVFFSAFSSQKTKGETASLSFGSSFGFPRIAVAGAKPAFFAP
        FSFS  PGKVD+RKVACFSPGLMAAYVVVGLPT MPP S S     SKGAGS KT  KDVFFSAFSS K K ETASL+F SSFGFPRIAVAGAKPAFFAP
Subjt:  FSFSSPPGKVDQRKVACFSPGLMAAYVVVGLPTRMPPWSKSPFTSTSKGAGSKKTCAKDVFFSAFSSQKTKGETASLSFGSSFGFPRIAVAGAKPAFFAP

Query:  RMRDKLRGKNTFSLCEVRKWRTHSILWAHRIKRKAALSWRSFRRQETLGLVGGAEHNESKPETDQGSLPAKPIGE-----------GPKDGACKVNRA--
        RMR K+RGK+TFSLCEV+K RTHSILWAHRIK KA LSW+SFRRQ+TLGLVG A H +SKP+TDQG+LPAKPIGE             KDGACKV+    
Subjt:  RMRDKLRGKNTFSLCEVRKWRTHSILWAHRIKRKAALSWRSFRRQETLGLVGGAEHNESKPETDQGSLPAKPIGE-----------GPKDGACKVNRA--

Query:  ---------PVLTSK--------HLIGERGNAHEAPAEREGLPGRMPMGAGFFEKARADSETWDLGLATNE
                 P  +S+        +LIGERGN HEAP EREGLPGRMPMGAGFFEKARADSETWDLGLATNE
Subjt:  ---------PVLTSK--------HLIGERGNAHEAPAEREGLPGRMPMGAGFFEKARADSETWDLGLATNE

ATCG00830.1 ribosomal protein L21.4e-0745.9Show/hide
Query:  GRNSSGRITVFHRGGGSKRLQRRIDLKRSTSSM-GIVERIEYDPNRSSRIAPVRWIEGVRQ
        GRN+ G IT  HRGGG KRL R+ID +R+   + G +  IEYDPNR++ I  + + +G ++
Subjt:  GRNSSGRITVFHRGGGSKRLQRRIDLKRSTSSM-GIVERIEYDPNRSSRIAPVRWIEGVRQ

ATCG01310.1 ribosomal protein L21.4e-0745.9Show/hide
Query:  GRNSSGRITVFHRGGGSKRLQRRIDLKRSTSSM-GIVERIEYDPNRSSRIAPVRWIEGVRQ
        GRN+ G IT  HRGGG KRL R+ID +R+   + G +  IEYDPNR++ I  + + +G ++
Subjt:  GRNSSGRITVFHRGGGSKRLQRRIDLKRSTSSM-GIVERIEYDPNRSSRIAPVRWIEGVRQ

ATMG00560.1 Nucleic acid-binding, OB-fold-like protein1.8e-12780Show/hide
Query:  RALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRRIDLKRSTSSMGIVERIEYDPNRSSRIAPVRWIEGVRQRKCKTIEEFAPPRKILEPTTTTIRGL
        RALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRL RRIDLKRSTSSMGIVE IEYDPNRSS+IAPVRWI+G  Q+K  TIE+FAPPRKILEPTT TI GL
Subjt:  RALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRRIDLKRSTSSMGIVERIEYDPNRSSRIAPVRWIEGVRQRKCKTIEEFAPPRKILEPTTTTIRGL

Query:  FSFSSPPGKVDQRKVACFSPGLMAAYVVVGLPTRMPPWSKSPFTSTSKGAGSKKTCAKDVFFSAFSSQKTKGETASLSFGSSFGFPRIAVAGAKPAFFAP
        FSFS  PGKVD+RKVACFSPGLMAAYVVVGLPT MPP S S     SKGAGS KT  KDVFFSAFSS K K ETASL+F SSFGFPRIAVAGAKPAFFAP
Subjt:  FSFSSPPGKVDQRKVACFSPGLMAAYVVVGLPTRMPPWSKSPFTSTSKGAGSKKTCAKDVFFSAFSSQKTKGETASLSFGSSFGFPRIAVAGAKPAFFAP

Query:  RMRDKLRGKNTFSLCEVRKWRTHSILWAHRIKRKAALSWRSFRRQETLGLVGGAEHNESKPETDQGSLPAKPIGE-----------GPKDGACKVNRAPV
        RMR K+RGK+TFSLCEV+K RTHSILWAHRIK KA LSW+SFRRQ+TLGLVG A H +SKP+TDQG+LPAKPIGE             KDGACKV+RAPV
Subjt:  RMRDKLRGKNTFSLCEVRKWRTHSILWAHRIKRKAALSWRSFRRQETLGLVGGAEHNESKPETDQGSLPAKPIGE-----------GPKDGACKVNRAPV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTACGATCTCGACAATGAGACAAAGCCAAGAGGGGAGAGCACTTAGACAATTCACTTTGAGTACAGGGAAGTCCGCTGGTAGGAATTCCTCAGGGCGTATTACGGT
TTTTCACCGAGGGGGTGGATCGAAGCGATTGCAGCGAAGAATTGATCTGAAACGAAGCACTTCGTCTATGGGCATTGTAGAAAGAATAGAATATGACCCTAATCGTTCTT
CTCGGATCGCTCCAGTACGATGGATCGAGGGGGTCCGCCAGAGGAAATGCAAGACGATAGAGGAGTTCGCTCCGCCGCGTAAGATCCTCGAACCTACCACGACCACCATC
CGCGGCCTATTTTCGTTCTCTTCCCCGCCCGGGAAGGTGGATCAAAGAAAGGTAGCTTGCTTCTCTCCTGGACTGATGGCGGCTTATGTAGTGGTCGGCCTTCCTACCAG
GATGCCTCCTTGGTCGAAGAGCCCCTTTACTAGTACTAGTAAGGGCGCAGGAAGCAAAAAAACTTGCGCGAAGGACGTTTTCTTCTCTGCCTTCTCCTCTCAAAAGACCA
AGGGAGAGACTGCATCCCTTTCCTTCGGTAGCTCTTTTGGTTTCCCAAGGATAGCGGTAGCTGGGGCAAAGCCCGCTTTCTTCGCTCCGCGAATGAGAGATAAACTCAGA
GGAAAAAACACGTTCTCTCTTTGCGAGGTCCGAAAGTGGAGAACGCATAGCATTCTCTGGGCACATAGGATTAAACGTAAAGCAGCGCTTTCTTGGCGGAGTTTTAGGCG
GCAAGAGACTTTAGGGCTTGTTGGAGGTGCGGAGCATAACGAATCGAAACCAGAGACGGATCAAGGTAGCTTGCCTGCCAAGCCGATAGGCGAAGGGCCGAAGGATGGAG
CGTGCAAAGTCAATCGTGCACCTGTCCTCACATCCAAACATCTGATTGGGGAACGGGGCAACGCCCATGAAGCTCCGGCGGAAAGGGAAGGCCTGCCAGGCCGTATGCCC
ATGGGTGCAGGATTCTTCGAAAAAGCGCGGGCTGACTCGGAGACCTGGGACCTTGGCTTAGCAACGAATGAAGGGGAGCTCTTCGAGCTTTCTCCGCCAGTGGCTTATGT
AGTGGTCGGCCGGCAGAAAGCTCGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGATTACGATCTCGACAATGAGACAAAGCCAAGAGGGGAGAGCACTTAGACAATTCACTTTGAGTACAGGGAAGTCCGCTGGTAGGAATTCCTCAGGGCGTATTACGGT
TTTTCACCGAGGGGGTGGATCGAAGCGATTGCAGCGAAGAATTGATCTGAAACGAAGCACTTCGTCTATGGGCATTGTAGAAAGAATAGAATATGACCCTAATCGTTCTT
CTCGGATCGCTCCAGTACGATGGATCGAGGGGGTCCGCCAGAGGAAATGCAAGACGATAGAGGAGTTCGCTCCGCCGCGTAAGATCCTCGAACCTACCACGACCACCATC
CGCGGCCTATTTTCGTTCTCTTCCCCGCCCGGGAAGGTGGATCAAAGAAAGGTAGCTTGCTTCTCTCCTGGACTGATGGCGGCTTATGTAGTGGTCGGCCTTCCTACCAG
GATGCCTCCTTGGTCGAAGAGCCCCTTTACTAGTACTAGTAAGGGCGCAGGAAGCAAAAAAACTTGCGCGAAGGACGTTTTCTTCTCTGCCTTCTCCTCTCAAAAGACCA
AGGGAGAGACTGCATCCCTTTCCTTCGGTAGCTCTTTTGGTTTCCCAAGGATAGCGGTAGCTGGGGCAAAGCCCGCTTTCTTCGCTCCGCGAATGAGAGATAAACTCAGA
GGAAAAAACACGTTCTCTCTTTGCGAGGTCCGAAAGTGGAGAACGCATAGCATTCTCTGGGCACATAGGATTAAACGTAAAGCAGCGCTTTCTTGGCGGAGTTTTAGGCG
GCAAGAGACTTTAGGGCTTGTTGGAGGTGCGGAGCATAACGAATCGAAACCAGAGACGGATCAAGGTAGCTTGCCTGCCAAGCCGATAGGCGAAGGGCCGAAGGATGGAG
CGTGCAAAGTCAATCGTGCACCTGTCCTCACATCCAAACATCTGATTGGGGAACGGGGCAACGCCCATGAAGCTCCGGCGGAAAGGGAAGGCCTGCCAGGCCGTATGCCC
ATGGGTGCAGGATTCTTCGAAAAAGCGCGGGCTGACTCGGAGACCTGGGACCTTGGCTTAGCAACGAATGAAGGGGAGCTCTTCGAGCTTTCTCCGCCAGTGGCTTATGT
AGTGGTCGGCCGGCAGAAAGCTCGCTAA
Protein sequenceShow/hide protein sequence
MITISTMRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRRIDLKRSTSSMGIVERIEYDPNRSSRIAPVRWIEGVRQRKCKTIEEFAPPRKILEPTTTTI
RGLFSFSSPPGKVDQRKVACFSPGLMAAYVVVGLPTRMPPWSKSPFTSTSKGAGSKKTCAKDVFFSAFSSQKTKGETASLSFGSSFGFPRIAVAGAKPAFFAPRMRDKLR
GKNTFSLCEVRKWRTHSILWAHRIKRKAALSWRSFRRQETLGLVGGAEHNESKPETDQGSLPAKPIGEGPKDGACKVNRAPVLTSKHLIGERGNAHEAPAEREGLPGRMP
MGAGFFEKARADSETWDLGLATNEGELFELSPPVAYVVVGRQKAR