; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0002360 (gene) of Snake gourd v1 genome

Gene IDTan0002360
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionCalcium-binding EF-hand family protein
Genome locationLG01:17380344..17381093
RNA-Seq ExpressionTan0002360
SyntenyTan0002360
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site
IPR044205 - Calcium-binding protein KIC/PBP1/KRP1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004152909.1 calcium-binding protein KRP1 [Cucumis sativus]6.5e-5285.83Show/hide
Query:  MAAKNQRPQSESRFEDWLPVMACNLGGEGLIGELCNGFNLLMDRETGVINFESLKRNAAVLGLGDLTDDDLRGMLREGDYDGDGALNQMEFCVLMFRLSP
        M  KNQ PQSES F+DWLPVMA NLGGEGLIGELCNGFNLLMDRE GVINFESLKRNAA LGLGDL+DD+LRGMLREGD+DGDGALNQMEFCVLMFRLSP
Subjt:  MAAKNQRPQSESRFEDWLPVMACNLGGEGLIGELCNGFNLLMDRETGVINFESLKRNAAVLGLGDLTDDDLRGMLREGDYDGDGALNQMEFCVLMFRLSP

Query:  DLMDASRYWFQESLRQGFRD
        +LM+ASRY F ESLR+ FRD
Subjt:  DLMDASRYWFQESLRQGFRD

XP_022144078.1 calcium-binding protein PBP1-like [Momordica charantia]4.9e-5286.44Show/hide
Query:  MAAKNQRPQSESRFEDWLPVMACNLGGEGLIGELCNGFNLLMDRETGVINFESLKRNAAVLGLGDLTDDDLRGMLREGDYDGDGALNQMEFCVLMFRLSP
        MAAKNQ PQS+S FEDWLP MA  LGGEGLIGELCNGFNLLMDRE GVINFESLKRNAA LGLGDL+D++LRGML EGD+DGDGALNQMEFCVLMFRLSP
Subjt:  MAAKNQRPQSESRFEDWLPVMACNLGGEGLIGELCNGFNLLMDRETGVINFESLKRNAAVLGLGDLTDDDLRGMLREGDYDGDGALNQMEFCVLMFRLSP

Query:  DLMDASRYWFQESLRQGF
        DLMDASRYW QESLR+ F
Subjt:  DLMDASRYWFQESLRQGF

XP_022932158.1 calcium-binding protein PBP1-like [Cucurbita moschata]1.3e-4981.15Show/hide
Query:  MAAKNQRPQSESRFEDWLPVMACNLGGEGLIGELCNGFNLLMDRETGVINFESLKRNAAVLGLGDLTDDDLRGMLREGDYDGDGALNQMEFCVLMFRLSP
        MA  NQ PQSES FEDWLP MAC LGGEGLIGELCNGFNLLMD E GVIN ESLKRNAA LGLGD +D++LRGMLREGD+DGDGALNQMEFCVLMFRLSP
Subjt:  MAAKNQRPQSESRFEDWLPVMACNLGGEGLIGELCNGFNLLMDRETGVINFESLKRNAAVLGLGDLTDDDLRGMLREGDYDGDGALNQMEFCVLMFRLSP

Query:  DLMDASRYWFQESLRQGFRDFS
        +LMDASRY FQ+SLR  F +F+
Subjt:  DLMDASRYWFQESLRQGFRDFS

XP_022985284.1 calcium-binding protein PBP1-like [Cucurbita maxima]6.0e-5081.97Show/hide
Query:  MAAKNQRPQSESRFEDWLPVMACNLGGEGLIGELCNGFNLLMDRETGVINFESLKRNAAVLGLGDLTDDDLRGMLREGDYDGDGALNQMEFCVLMFRLSP
        MA  NQ PQSES FEDWLP MAC LGGEGLIGELCNGFNLLMD E GVIN ESLKRNAA LGLGD +D++LRGMLREGD+DGDGALNQMEFCVLMFRLSP
Subjt:  MAAKNQRPQSESRFEDWLPVMACNLGGEGLIGELCNGFNLLMDRETGVINFESLKRNAAVLGLGDLTDDDLRGMLREGDYDGDGALNQMEFCVLMFRLSP

Query:  DLMDASRYWFQESLRQGFRDFS
        +LMDASRY FQ+SLR+ F +FS
Subjt:  DLMDASRYWFQESLRQGFRDFS

XP_038905287.1 calcium-binding protein KRP1-like [Benincasa hispida]9.0e-5486.89Show/hide
Query:  MAAKNQRPQSESRFEDWLPVMACNLGGEGLIGELCNGFNLLMDRETGVINFESLKRNAAVLGLGDLTDDDLRGMLREGDYDGDGALNQMEFCVLMFRLSP
        MA+KNQ PQSESRFEDWLP MA NLGGEGLIGELCNGFNLLMDRE GVINFESLKRNAAVLGLGDLTD++LRGMLREGD+DGDGALN+MEFCVLMFRLSP
Subjt:  MAAKNQRPQSESRFEDWLPVMACNLGGEGLIGELCNGFNLLMDRETGVINFESLKRNAAVLGLGDLTDDDLRGMLREGDYDGDGALNQMEFCVLMFRLSP

Query:  DLMDASRYWFQESLRQGFRDFS
         LM+ASRY F E LR+ FRDFS
Subjt:  DLMDASRYWFQESLRQGFRDFS

TrEMBL top hitse value%identityAlignment
A0A0A0L2H0 EF-hand domain-containing protein3.1e-5285.83Show/hide
Query:  MAAKNQRPQSESRFEDWLPVMACNLGGEGLIGELCNGFNLLMDRETGVINFESLKRNAAVLGLGDLTDDDLRGMLREGDYDGDGALNQMEFCVLMFRLSP
        M  KNQ PQSES F+DWLPVMA NLGGEGLIGELCNGFNLLMDRE GVINFESLKRNAA LGLGDL+DD+LRGMLREGD+DGDGALNQMEFCVLMFRLSP
Subjt:  MAAKNQRPQSESRFEDWLPVMACNLGGEGLIGELCNGFNLLMDRETGVINFESLKRNAAVLGLGDLTDDDLRGMLREGDYDGDGALNQMEFCVLMFRLSP

Query:  DLMDASRYWFQESLRQGFRD
        +LM+ASRY F ESLR+ FRD
Subjt:  DLMDASRYWFQESLRQGFRD

A0A5A7SII1 Calcium-binding protein PBP1-like1.5e-4982.5Show/hide
Query:  MAAKNQRPQSESRFEDWLPVMACNLGGEGLIGELCNGFNLLMDRETGVINFESLKRNAAVLGLGDLTDDDLRGMLREGDYDGDGALNQMEFCVLMFRLSP
        M + N  PQSES F+DWLPVMA  LGGEGLIGELCNGFNLLMDRE GVINFESLKRNAA LGLGDL+DD+LRGMLREGD +GDGALNQMEFCVLMFRLSP
Subjt:  MAAKNQRPQSESRFEDWLPVMACNLGGEGLIGELCNGFNLLMDRETGVINFESLKRNAAVLGLGDLTDDDLRGMLREGDYDGDGALNQMEFCVLMFRLSP

Query:  DLMDASRYWFQESLRQGFRD
        +LM+ASRY F ESLR+ FRD
Subjt:  DLMDASRYWFQESLRQGFRD

A0A6J1CSD5 calcium-binding protein PBP1-like2.4e-5286.44Show/hide
Query:  MAAKNQRPQSESRFEDWLPVMACNLGGEGLIGELCNGFNLLMDRETGVINFESLKRNAAVLGLGDLTDDDLRGMLREGDYDGDGALNQMEFCVLMFRLSP
        MAAKNQ PQS+S FEDWLP MA  LGGEGLIGELCNGFNLLMDRE GVINFESLKRNAA LGLGDL+D++LRGML EGD+DGDGALNQMEFCVLMFRLSP
Subjt:  MAAKNQRPQSESRFEDWLPVMACNLGGEGLIGELCNGFNLLMDRETGVINFESLKRNAAVLGLGDLTDDDLRGMLREGDYDGDGALNQMEFCVLMFRLSP

Query:  DLMDASRYWFQESLRQGF
        DLMDASRYW QESLR+ F
Subjt:  DLMDASRYWFQESLRQGF

A0A6J1F0V4 calcium-binding protein PBP1-like6.5e-5081.15Show/hide
Query:  MAAKNQRPQSESRFEDWLPVMACNLGGEGLIGELCNGFNLLMDRETGVINFESLKRNAAVLGLGDLTDDDLRGMLREGDYDGDGALNQMEFCVLMFRLSP
        MA  NQ PQSES FEDWLP MAC LGGEGLIGELCNGFNLLMD E GVIN ESLKRNAA LGLGD +D++LRGMLREGD+DGDGALNQMEFCVLMFRLSP
Subjt:  MAAKNQRPQSESRFEDWLPVMACNLGGEGLIGELCNGFNLLMDRETGVINFESLKRNAAVLGLGDLTDDDLRGMLREGDYDGDGALNQMEFCVLMFRLSP

Query:  DLMDASRYWFQESLRQGFRDFS
        +LMDASRY FQ+SLR  F +F+
Subjt:  DLMDASRYWFQESLRQGFRDFS

A0A6J1JCW0 calcium-binding protein PBP1-like2.9e-5081.97Show/hide
Query:  MAAKNQRPQSESRFEDWLPVMACNLGGEGLIGELCNGFNLLMDRETGVINFESLKRNAAVLGLGDLTDDDLRGMLREGDYDGDGALNQMEFCVLMFRLSP
        MA  NQ PQSES FEDWLP MAC LGGEGLIGELCNGFNLLMD E GVIN ESLKRNAA LGLGD +D++LRGMLREGD+DGDGALNQMEFCVLMFRLSP
Subjt:  MAAKNQRPQSESRFEDWLPVMACNLGGEGLIGELCNGFNLLMDRETGVINFESLKRNAAVLGLGDLTDDDLRGMLREGDYDGDGALNQMEFCVLMFRLSP

Query:  DLMDASRYWFQESLRQGFRDFS
        +LMDASRY FQ+SLR+ F +FS
Subjt:  DLMDASRYWFQESLRQGFRDFS

SwissProt top hitse value%identityAlignment
O81831 Calcium-binding protein KRP12.9e-3972.81Show/hide
Query:  QRPQSESRFEDWLPVMACNLGGEGLIGELCNGFNLLMDRETGVINFESLKRN-AAVLGLGDLTDDDLRGMLREGDYDGDGALNQMEFCVLMFRLSPDLMD
        Q PQ    F D+LP MA NLGGEGLIGELCNGF LLMDRE GVI FESL+RN AAVLGLGDLTD+D+R M++EGD+D DGALNQMEFCVLMFRLSPDLM+
Subjt:  QRPQSESRFEDWLPVMACNLGGEGLIGELCNGFNLLMDRETGVINFESLKRN-AAVLGLGDLTDDDLRGMLREGDYDGDGALNQMEFCVLMFRLSPDLMD

Query:  ASRYWFQESLRQGF
        ASR    E + + F
Subjt:  ASRYWFQESLRQGF

P43646 Caltractin (Fragment)6.4e-1040.7Show/hide
Query:  FEDWLPVMACNLGGEGLIGELCNGFNLLMDRETGVINFESLKRNAAVLGLGDLTDDDLRGMLREGDYDGDGALNQMEFCVLMFRLS
        FE++L +M   +G      E+   F L  D ETG I+F++LKR A  LG  ++TD++L+ M+ E D DGDG +N+ EF  +M + S
Subjt:  FEDWLPVMACNLGGEGLIGELCNGFNLLMDRETGVINFESLKRNAAVLGLGDLTDDDLRGMLREGDYDGDGALNQMEFCVLMFRLS

Q06827 Caltractin6.4e-1040.7Show/hide
Query:  FEDWLPVMACNLGGEGLIGELCNGFNLLMDRETGVINFESLKRNAAVLGLGDLTDDDLRGMLREGDYDGDGALNQMEFCVLMFRLS
        FE++L +M   +G      E+   F L  D ETG I+F++LKR A  LG  ++TD++L+ M+ E D DGDG +N+ EF  +M + S
Subjt:  FEDWLPVMACNLGGEGLIGELCNGFNLLMDRETGVINFESLKRNAAVLGLGDLTDDDLRGMLREGDYDGDGALNQMEFCVLMFRLS

Q9LSQ6 Calcium-binding protein PBP18.8e-3665.52Show/hide
Query:  KNQRPQSESRFEDWLPVMACNLGGEGLIGELCNGFNLLMDRETGVINFESLKRNAA-VLGLGDLTDDDLRGMLREGDYDGDGALNQMEFCVLMFRLSPDL
        +NQ PQ    F+D+ P MA  LGGEGLI E+C GF LLMD++ GVI FESL+RNA+ VLGLGDLTDDD+R M+ EGD+D DGALNQMEFCVLMFRLSP+L
Subjt:  KNQRPQSESRFEDWLPVMACNLGGEGLIGELCNGFNLLMDRETGVINFESLKRNAA-VLGLGDLTDDDLRGMLREGDYDGDGALNQMEFCVLMFRLSPDL

Query:  MDASRYWFQESLRQGF
        M+ASR    E + + F
Subjt:  MDASRYWFQESLRQGF

Q9ZPX9 Calcium-binding protein KIC4.4e-2751.89Show/hide
Query:  ESRFEDWLPVMACNLGGEGLIGELCNGFNLLMDRETGVINFESLKRNAAVLGLGDLTDDDLRGMLREGDYDGDGALNQMEFCVLMFRLSPDLMDASRYWF
        E+++ED LPVMA  +  E  + ELC GF+LL D E  +I  ESL+RN+ +LG+  ++ +D +GM+REGD DGDGALNQ EFCVLM RLSP++M+ +  W 
Subjt:  ESRFEDWLPVMACNLGGEGLIGELCNGFNLLMDRETGVINFESLKRNAAVLGLGDLTDDDLRGMLREGDYDGDGALNQMEFCVLMFRLSPDLMDASRYWF

Query:  QESLRQ
        +++L Q
Subjt:  QESLRQ

Arabidopsis top hitse value%identityAlignment
AT2G46600.1 Calcium-binding EF-hand family protein3.1e-2851.89Show/hide
Query:  ESRFEDWLPVMACNLGGEGLIGELCNGFNLLMDRETGVINFESLKRNAAVLGLGDLTDDDLRGMLREGDYDGDGALNQMEFCVLMFRLSPDLMDASRYWF
        E+++ED LPVMA  +  E  + ELC GF+LL D E  +I  ESL+RN+ +LG+  ++ +D +GM+REGD DGDGALNQ EFCVLM RLSP++M+ +  W 
Subjt:  ESRFEDWLPVMACNLGGEGLIGELCNGFNLLMDRETGVINFESLKRNAAVLGLGDLTDDDLRGMLREGDYDGDGALNQMEFCVLMFRLSPDLMDASRYWF

Query:  QESLRQ
        +++L Q
Subjt:  QESLRQ

AT4G27280.1 Calcium-binding EF-hand family protein2.1e-4072.81Show/hide
Query:  QRPQSESRFEDWLPVMACNLGGEGLIGELCNGFNLLMDRETGVINFESLKRN-AAVLGLGDLTDDDLRGMLREGDYDGDGALNQMEFCVLMFRLSPDLMD
        Q PQ    F D+LP MA NLGGEGLIGELCNGF LLMDRE GVI FESL+RN AAVLGLGDLTD+D+R M++EGD+D DGALNQMEFCVLMFRLSPDLM+
Subjt:  QRPQSESRFEDWLPVMACNLGGEGLIGELCNGFNLLMDRETGVINFESLKRN-AAVLGLGDLTDDDLRGMLREGDYDGDGALNQMEFCVLMFRLSPDLMD

Query:  ASRYWFQESLRQGF
        ASR    E + + F
Subjt:  ASRYWFQESLRQGF

AT4G37010.1 centrin 22.6e-0630.3Show/hide
Query:  MAAKNQRPQSESRFEDWLPVMACNLGGEGLIGELCNGFNLLMDRETGVINFESLKRNAAVLGLGDLTDDDLRGMLREGDYDGDGALNQMEFCVLMFRLS
        MA  ++       F++++ +M    G    I EL   F ++     G I+   +K  A  LG  + TD+D+  M+ E D D DG +N  EF  +M R S
Subjt:  MAAKNQRPQSESRFEDWLPVMACNLGGEGLIGELCNGFNLLMDRETGVINFESLKRNAAVLGLGDLTDDDLRGMLREGDYDGDGALNQMEFCVLMFRLS

AT4G37010.2 centrin 22.6e-0630.3Show/hide
Query:  MAAKNQRPQSESRFEDWLPVMACNLGGEGLIGELCNGFNLLMDRETGVINFESLKRNAAVLGLGDLTDDDLRGMLREGDYDGDGALNQMEFCVLMFRLS
        MA  ++       F++++ +M    G    I EL   F ++     G I+   +K  A  LG  + TD+D+  M+ E D D DG +N  EF  +M R S
Subjt:  MAAKNQRPQSESRFEDWLPVMACNLGGEGLIGELCNGFNLLMDRETGVINFESLKRNAAVLGLGDLTDDDLRGMLREGDYDGDGALNQMEFCVLMFRLS

AT5G54490.1 pinoid-binding protein 16.3e-3765.52Show/hide
Query:  KNQRPQSESRFEDWLPVMACNLGGEGLIGELCNGFNLLMDRETGVINFESLKRNAA-VLGLGDLTDDDLRGMLREGDYDGDGALNQMEFCVLMFRLSPDL
        +NQ PQ    F+D+ P MA  LGGEGLI E+C GF LLMD++ GVI FESL+RNA+ VLGLGDLTDDD+R M+ EGD+D DGALNQMEFCVLMFRLSP+L
Subjt:  KNQRPQSESRFEDWLPVMACNLGGEGLIGELCNGFNLLMDRETGVINFESLKRNAA-VLGLGDLTDDDLRGMLREGDYDGDGALNQMEFCVLMFRLSPDL

Query:  MDASRYWFQESLRQGF
        M+ASR    E + + F
Subjt:  MDASRYWFQESLRQGF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGCGAAGAATCAGAGGCCCCAATCGGAATCCAGATTCGAAGATTGGCTGCCGGTGATGGCCTGCAACCTTGGCGGGGAGGGGCTGATCGGAGAACTCTGCAACGG
ATTCAATCTGCTGATGGACAGAGAGACGGGGGTTATCAATTTCGAGAGCTTGAAGAGGAATGCGGCGGTGCTAGGGCTGGGGGATCTCACCGACGACGACCTCAGAGGGA
TGTTGAGGGAAGGGGATTACGACGGCGACGGCGCTCTCAATCAGATGGAGTTTTGTGTTCTTATGTTCAGATTAAGCCCCGATTTGATGGACGCCTCTCGTTACTGGTTC
CAAGAAAGTCTCCGCCAAGGCTTTAGGGATTTTTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATCCGAAACAAGAAGCCATCATTTACCCAAAATGACGAATTTACCCTCAGGACCTTCTGAGAAAATGCCCTCCCCCCGCCTGCAGAGCTTCATTATCTGTATCTTAGTTG
TCTTGTATGCCCTCTCCTTCTCGGAAAACCCCAGCGACCTTCTTCCACCTTCCCCCTCTCTCTCTATTTATTCCTCTTCAGAATCATAATCGAAATCAACCCAATCCAAA
TCCACTTCTATCTCTCTCTCTATAATTTCTAATCTAAATCGATCCCAATGGCCGCGAAGAATCAGAGGCCCCAATCGGAATCCAGATTCGAAGATTGGCTGCCGGTGATG
GCCTGCAACCTTGGCGGGGAGGGGCTGATCGGAGAACTCTGCAACGGATTCAATCTGCTGATGGACAGAGAGACGGGGGTTATCAATTTCGAGAGCTTGAAGAGGAATGC
GGCGGTGCTAGGGCTGGGGGATCTCACCGACGACGACCTCAGAGGGATGTTGAGGGAAGGGGATTACGACGGCGACGGCGCTCTCAATCAGATGGAGTTTTGTGTTCTTA
TGTTCAGATTAAGCCCCGATTTGATGGACGCCTCTCGTTACTGGTTCCAAGAAAGTCTCCGCCAAGGCTTTAGGGATTTTTCTTGATTGTTTTTATAAATTCTTTTCGGG
GCTGAGATTACTGATTGCTTAGGTTATGGATGTTGTTCTTGTTCTCTACTTTTTTTTTTTTACTGGAAAATACAAAAACAAATTGGACTC
Protein sequenceShow/hide protein sequence
MAAKNQRPQSESRFEDWLPVMACNLGGEGLIGELCNGFNLLMDRETGVINFESLKRNAAVLGLGDLTDDDLRGMLREGDYDGDGALNQMEFCVLMFRLSPDLMDASRYWF
QESLRQGFRDFS