; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0002387 (gene) of Snake gourd v1 genome

Gene IDTan0002387
OrganismTrichosanthes anguina (Snake gourd v1)
Description60S ribosomal protein L34
Genome locationLG11:4417977..4419718
RNA-Seq ExpressionTan0002387
SyntenyTan0002387
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0042254 - ribosome biogenesis (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR008195 - Ribosomal protein L34Ae
IPR018065 - Ribosomal protein L34e, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583599.1 Crooked neck-like protein 1, partial [Cucurbita argyrosperma subsp. sororia]2.8e-5597.5Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQSTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKL+YQ+TKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQSTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLAAKS
        KIVKKVLKIQKAKEKLA+KS
Subjt:  KIVKKVLKIQKAKEKLAAKS

PIN24078.1 60s ribosomal protein L34 [Handroanthus impetiginosus]1.2e-5598.33Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQSTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKL+YQSTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRL+RNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQSTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLAAKS
        KIVKKVLKIQKAKEKLAAKS
Subjt:  KIVKKVLKIQKAKEKLAAKS

XP_004138175.3 60S ribosomal protein L34 [Cucumis sativus]2.8e-5597.5Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQSTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKL+YQ+TKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQSTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLAAKS
        KIVKKVLKIQKAKEKLA+KS
Subjt:  KIVKKVLKIQKAKEKLAAKS

XP_016578358.1 PREDICTED: 60S ribosomal protein L34 [Capsicum annuum]2.8e-5597.5Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQSTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQ+TKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRL+RNRRTVNRAYGGVLSGGAVRERI+RAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQSTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLAAKS
        KIVKKVLKIQKAKEKLAAKS
Subjt:  KIVKKVLKIQKAKEKLAAKS

XP_038893923.1 60S ribosomal protein L34-like [Benincasa hispida]1.2e-5598.33Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQSTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKL+YQ+TKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQSTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLAAKS
        KIVKKVLKIQKAKEKLAAKS
Subjt:  KIVKKVLKIQKAKEKLAAKS

TrEMBL top hitse value%identityAlignment
A0A2G2WM29 Uncharacterized protein1.3e-5597.5Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQSTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQ+TKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRL+RNRRTVNRAYGGVLSGGAVRERI+RAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQSTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLAAKS
        KIVKKVLKIQKAKEKLAAKS
Subjt:  KIVKKVLKIQKAKEKLAAKS

A0A2G9HI44 60s ribosomal protein L341.3e-5597.5Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQSTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKL+YQSTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRL+RNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQSTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLAAKS
        KIVKKVLKIQKAKEKLA+KS
Subjt:  KIVKKVLKIQKAKEKLAAKS

A0A2G9I2U4 60s ribosomal protein L346.0e-5698.33Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQSTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKL+YQSTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRL+RNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQSTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLAAKS
        KIVKKVLKIQKAKEKLAAKS
Subjt:  KIVKKVLKIQKAKEKLAAKS

A0A6J1HLN7 60S ribosomal protein L34-like1.3e-5597.5Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQSTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKL+YQ+TKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQSTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLAAKS
        KIVKKVLKIQKAKEKLA+KS
Subjt:  KIVKKVLKIQKAKEKLAAKS

A0A6J1I6I6 60S ribosomal protein L34-like1.3e-5597.5Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQSTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKL+YQ+TKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQSTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLAAKS
        KIVKKVLKIQKAKEKLA+KS
Subjt:  KIVKKVLKIQKAKEKLAAKS

SwissProt top hitse value%identityAlignment
P40590 60S ribosomal protein L347.5e-5693.33Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQSTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ
        MVQRLTYR+RHSYATKSNQHRVVKTPGGKL+YQ+TKKRASGPKCPVTGKRIQGIPHLRP EYKRSRL+RNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQSTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLAAKS
        KIVKKVLKIQK KEK AAK+
Subjt:  KIVKKVLKIQKAKEKLAAKS

P41098 60S ribosomal protein L341.8e-5797.5Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQSTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQSTKKRASGPKCPVTGKRIQGIPHLRP EYKRSRL+RNRRTVNRAYGGVLSG AVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQSTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLAAKS
        KIVKKVLKIQKAKEKLAAKS
Subjt:  KIVKKVLKIQKAKEKLAAKS

Q42351 60S ribosomal protein L34-12.4e-5490Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQSTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ
        MVQRL YR RHSYATKSNQHR+VKTPGGKL+YQ+TKKRASGPKCPVTGKRIQGIPHLRP+EYKRSRL+RNRRTVNRAYGGVLSG AVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQSTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLAAKS
        KIVKKVLK+QKAKEK+A K+
Subjt:  KIVKKVLKIQKAKEKLAAKS

Q9FE65 60S ribosomal protein L34-21.6e-5390.76Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQSTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ
        MVQRL YR RHSYATKSNQHR+VKTPGGKL YQ+TKKRASGPKCPVTGKRIQGIPHLRP EYKRSRL+RNRRTVNRAYGGVLSG AVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQSTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLAAK
        KIVKKVLK+QKAKEK+A K
Subjt:  KIVKKVLKIQKAKEKLAAK

Q9LJW6 60S ribosomal protein L34-34.6e-5390Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQSTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ
        MVQRL YR RHSYATKSNQHR+VKTPGGKL YQ+T KRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARN RTVNRAYGGVLSG AVRERI+RAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQSTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLAAKS
        KIVKKVLK+QKAKEK A KS
Subjt:  KIVKKVLKIQKAKEKLAAKS

Arabidopsis top hitse value%identityAlignment
AT1G26880.1 Ribosomal protein L34e superfamily protein1.7e-5590Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQSTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ
        MVQRL YR RHSYATKSNQHR+VKTPGGKL+YQ+TKKRASGPKCPVTGKRIQGIPHLRP+EYKRSRL+RNRRTVNRAYGGVLSG AVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQSTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLAAKS
        KIVKKVLK+QKAKEK+A K+
Subjt:  KIVKKVLKIQKAKEKLAAKS

AT1G26880.2 Ribosomal protein L34e superfamily protein5.7e-4389.13Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQSTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERII
        MVQRL YR RHSYATKSNQHR+VKTPGGKL+YQ+TKKRASGPKCPVTGKRIQGIPHLRP+EYKRSRL+RNRRTVNRAYGGVLSG AVRER +
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQSTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERII

AT1G69620.1 ribosomal protein L341.1e-5490.76Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQSTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ
        MVQRL YR RHSYATKSNQHR+VKTPGGKL YQ+TKKRASGPKCPVTGKRIQGIPHLRP EYKRSRL+RNRRTVNRAYGGVLSG AVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQSTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLAAK
        KIVKKVLK+QKAKEK+A K
Subjt:  KIVKKVLKIQKAKEKLAAK

AT3G28900.1 Ribosomal protein L34e superfamily protein3.2e-5490Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQSTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ
        MVQRL YR RHSYATKSNQHR+VKTPGGKL YQ+T KRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARN RTVNRAYGGVLSG AVRERI+RAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQSTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLAAKS
        KIVKKVLK+QKAKEK A KS
Subjt:  KIVKKVLKIQKAKEKLAAKS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGCAGCGACTTACTTACCGTAAGCGCCACAGCTACGCCACCAAATCCAATCAGCACCGTGTCGTCAAGACCCCTGGTGGAAAGTTGATCTACCAAAGCACTAAGAA
GAGGGCCAGCGGTCCCAAATGTCCTGTTACCGGGAAGAGAATCCAAGGGATTCCGCACTTGAGGCCTGCTGAATACAAGAGGTCTAGACTGGCTAGGAACCGTAGAACTG
TAAATCGGGCATATGGTGGTGTACTGTCAGGCGGTGCTGTCAGGGAGAGGATTATTCGAGCTTTTCTGGTAGAAGAGCAGAAGATTGTGAAAAAGGTATTGAAAATTCAA
AAAGCAAAGGAAAAGTTAGCCGCTAAGAGTTAA
mRNA sequenceShow/hide mRNA sequence
TATTTATCCAACTCCCTCCGCCAATCTGCAGCCCCCCTTGCCGCGATTTCTCTCAGAGACGCATCGAACTTAAGGTTAATCGAAGATGGTGCAGCGACTTACTTACCGTA
AGCGCCACAGCTACGCCACCAAATCCAATCAGCACCGTGTCGTCAAGACCCCTGGTGGAAAGTTGATCTACCAAAGCACTAAGAAGAGGGCCAGCGGTCCCAAATGTCCT
GTTACCGGGAAGAGAATCCAAGGGATTCCGCACTTGAGGCCTGCTGAATACAAGAGGTCTAGACTGGCTAGGAACCGTAGAACTGTAAATCGGGCATATGGTGGTGTACT
GTCAGGCGGTGCTGTCAGGGAGAGGATTATTCGAGCTTTTCTGGTAGAAGAGCAGAAGATTGTGAAAAAGGTATTGAAAATTCAAAAAGCAAAGGAAAAGTTAGCCGCTA
AGAGTTAAATGAGTAGGTGAAAAGGATGAGAAATGCATGGAAACTTTTCTGTGGTCTAAGGAGTATTTTGCCTTGAATTTTCGAAATTTTAGTGTTGATAGTGACTAGGT
GTTTCTGCTTTTGCTGAATTGGATCGCCACATTTTGATTCTTCATTTTGTTGACAAATCAATCCGTCAGGTCTTGTTTGGCTATATTATGTATCTACTATGAGAATTGGG
ATGTTATTTTTTAACTCCCTTCTAAAGATTTTTGTAGTATGTTGCTGAATCTTATACGAACTTTCTTCTTGATTTGGCATCAGAATGGAATTTCTCCGATTAGATTGAGT
TTAATTTTATTGTTCGATGTGGTTCACCCTATGGATTATGTTGTGCCCATGTTCATTATGTTGAATTTTTTGGAGATTTTGAAAATGTATTTTAACTAGATTTTTTCCCC
TG
Protein sequenceShow/hide protein sequence
MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQSTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQ
KAKEKLAAKS