; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0002411 (gene) of Snake gourd v1 genome

Gene IDTan0002411
OrganismTrichosanthes anguina (Snake gourd v1)
Description(thale cress) hypothetical protein
Genome locationLG06:3937475..3938083
RNA-Seq ExpressionTan0002411
SyntenyTan0002411
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575656.1 hypothetical protein SDJN03_26295, partial [Cucurbita argyrosperma subsp. sororia]2.0e-2171.28Show/hide
Query:  MEIGHFEGMLATAAVFVLVQILVYLILSKSSDVFSKNAKRSLSFRQVRSLSIRRILAALSDFPSGGELSPSPSENRSPFLIRGECAMVSDEGSS
        MEI H EGM  TAAVF+LVQILVYLILSKSS VFSKN KRSLSFRQVRSL+IRRI+AALSDFPSG      P E+      RGEC  + DEGSS
Subjt:  MEIGHFEGMLATAAVFVLVQILVYLILSKSSDVFSKNAKRSLSFRQVRSLSIRRILAALSDFPSGGELSPSPSENRSPFLIRGECAMVSDEGSS

XP_022147203.1 uncharacterized protein LOC111016209 [Momordica charantia]1.4e-2577.66Show/hide
Query:  MEIGHFEGMLATAAVFVLVQILVYLILSKSSDVFSKNAKRSLSFRQVRSLSIRRILAALSDFPSGGELSPSPSENRSPFLIRGECAMVSDEGSS
        MEI   EG++ATAAVF LVQILVYLILSKSSDVFSKN KRSLSFR VRSLSIRRILAALSD PSGGE SP P+E+ SPF I GECA +  +GSS
Subjt:  MEIGHFEGMLATAAVFVLVQILVYLILSKSSDVFSKNAKRSLSFRQVRSLSIRRILAALSDFPSGGELSPSPSENRSPFLIRGECAMVSDEGSS

XP_022954080.1 uncharacterized protein LOC111456452 [Cucurbita moschata]7.0e-2272.34Show/hide
Query:  MEIGHFEGMLATAAVFVLVQILVYLILSKSSDVFSKNAKRSLSFRQVRSLSIRRILAALSDFPSGGELSPSPSENRSPFLIRGECAMVSDEGSS
        MEI H EGM  TAAVF+LVQILVYLILSKSS VFSKN KRSLSFRQVRSLSIRRI+AALSDFPSG   +  P E+      RGEC  + DEGSS
Subjt:  MEIGHFEGMLATAAVFVLVQILVYLILSKSSDVFSKNAKRSLSFRQVRSLSIRRILAALSDFPSGGELSPSPSENRSPFLIRGECAMVSDEGSS

XP_022991948.1 uncharacterized protein LOC111488440 [Cucurbita maxima]4.3e-1978.95Show/hide
Query:  MEIGHFEGMLATAAVFVLVQILVYLILSKSSDVFSKNAKRSLSFRQVRSLSIRRILAALSDFPSGGELSPSPSENR
        MEI H EGM  TAAVF+LVQILVYLILSKSS VFSKN KRSLSFRQVRSLSIRRI+AALSDFPSG   +  P E+R
Subjt:  MEIGHFEGMLATAAVFVLVQILVYLILSKSSDVFSKNAKRSLSFRQVRSLSIRRILAALSDFPSGGELSPSPSENR

XP_023548863.1 uncharacterized protein LOC111807384 [Cucurbita pepo subsp. pepo]1.6e-2171.28Show/hide
Query:  MEIGHFEGMLATAAVFVLVQILVYLILSKSSDVFSKNAKRSLSFRQVRSLSIRRILAALSDFPSGGELSPSPSENRSPFLIRGECAMVSDEGSS
        MEI H EGM  TAAVF+LVQILVYLILSKSS VFSKN KRSLSFRQVRSL+IRRI+AALSDFPSG   +  P E+      RGEC  + DEGSS
Subjt:  MEIGHFEGMLATAAVFVLVQILVYLILSKSSDVFSKNAKRSLSFRQVRSLSIRRILAALSDFPSGGELSPSPSENRSPFLIRGECAMVSDEGSS

TrEMBL top hitse value%identityAlignment
A0A6J1D0M4 uncharacterized protein LOC1110162096.6e-2677.66Show/hide
Query:  MEIGHFEGMLATAAVFVLVQILVYLILSKSSDVFSKNAKRSLSFRQVRSLSIRRILAALSDFPSGGELSPSPSENRSPFLIRGECAMVSDEGSS
        MEI   EG++ATAAVF LVQILVYLILSKSSDVFSKN KRSLSFR VRSLSIRRILAALSD PSGGE SP P+E+ SPF I GECA +  +GSS
Subjt:  MEIGHFEGMLATAAVFVLVQILVYLILSKSSDVFSKNAKRSLSFRQVRSLSIRRILAALSDFPSGGELSPSPSENRSPFLIRGECAMVSDEGSS

A0A6J1GRF7 uncharacterized protein LOC1114564523.4e-2272.34Show/hide
Query:  MEIGHFEGMLATAAVFVLVQILVYLILSKSSDVFSKNAKRSLSFRQVRSLSIRRILAALSDFPSGGELSPSPSENRSPFLIRGECAMVSDEGSS
        MEI H EGM  TAAVF+LVQILVYLILSKSS VFSKN KRSLSFRQVRSLSIRRI+AALSDFPSG   +  P E+      RGEC  + DEGSS
Subjt:  MEIGHFEGMLATAAVFVLVQILVYLILSKSSDVFSKNAKRSLSFRQVRSLSIRRILAALSDFPSGGELSPSPSENRSPFLIRGECAMVSDEGSS

A0A6J1JXQ0 uncharacterized protein LOC1114884402.1e-1978.95Show/hide
Query:  MEIGHFEGMLATAAVFVLVQILVYLILSKSSDVFSKNAKRSLSFRQVRSLSIRRILAALSDFPSGGELSPSPSENR
        MEI H EGM  TAAVF+LVQILVYLILSKSS VFSKN KRSLSFRQVRSLSIRRI+AALSDFPSG   +  P E+R
Subjt:  MEIGHFEGMLATAAVFVLVQILVYLILSKSSDVFSKNAKRSLSFRQVRSLSIRRILAALSDFPSGGELSPSPSENR

A0A6P4BPM5 uncharacterized protein LOC1074341564.4e-1465.71Show/hide
Query:  FEGMLATAAVFVLVQILVYLILSKSSDVFSKNAKRSLSFRQVRSLSIRRILAALSDFPSGGELSPSPSEN
        F  ML    +F LVQ LVYLILSKSS +FSK+ KRS SF+  RS+S+RR LAALSD P+GGELSPSP E+
Subjt:  FEGMLATAAVFVLVQILVYLILSKSSDVFSKNAKRSLSFRQVRSLSIRRILAALSDFPSGGELSPSPSEN

V7BSW8 Uncharacterized protein3.4e-1468.06Show/hide
Query:  MLATAAVFVLVQILVYLILSKSSDVFSKNAKRSLSFRQVRSLSIRRILAALSDFPSGGELSPSPSENRSPFL
        ML    VFVLVQ LVYLILS SS++FSKN KRS SFR  RS+SIRR+LA +SDFPS GE SPSP   +SP L
Subjt:  MLATAAVFVLVQILVYLILSKSSDVFSKNAKRSLSFRQVRSLSIRRILAALSDFPSGGELSPSPSENRSPFL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G05575.1 unknown protein9.5e-1765.71Show/hide
Query:  GHFEGMLATAAVFVLVQILVYLILSKSSDVF--SKNAKRSLSFRQVRSLSIRRILAALSDFPSGGELSPS
        G FEGML   ++F L+Q LVYLILSKSS VF  SK  KR+ SFR  RS+SIRRILA L D P+GGE+SPS
Subjt:  GHFEGMLATAAVFVLVQILVYLILSKSSDVF--SKNAKRSLSFRQVRSLSIRRILAALSDFPSGGELSPS

AT1G55207.1 unknown protein4.1e-0444.83Show/hide
Query:  MLATAAVFVLVQILVYLILSKSSDVFS-----KNAKRSLSFRQVRSLSIRRILAALSD
        +L  AA+FV++Q L +LI+S SSD+FS     K  KRS  F+  RS+S   + A +SD
Subjt:  MLATAAVFVLVQILVYLILSKSSDVFS-----KNAKRSLSFRQVRSLSIRRILAALSD

AT2G31945.1 unknown protein2.4e-1253.41Show/hide
Query:  MLATAAVFVLVQILVYLILSKSSDVF--SKNAKRSLSFRQVRSLSIRRILAALSDFPSGGELSPSPSENRSPFLIRGECAMVSDEGSS
        ML   A+F LVQ LVYLIL KSS VF  S + KR+ SFR +RS+SIRRILAAL D P+G ++  SPS N S    + E A  +   SS
Subjt:  MLATAAVFVLVQILVYLILSKSSDVF--SKNAKRSLSFRQVRSLSIRRILAALSDFPSGGELSPSPSENRSPFLIRGECAMVSDEGSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATTGGCCATTTCGAAGGAATGCTAGCGACTGCGGCCGTGTTCGTTCTTGTGCAGATTCTGGTTTATTTAATTCTCTCTAAATCTTCCGACGTCTTCTCGAAGAA
CGCGAAGAGGTCTCTCAGTTTCAGACAGGTTCGATCTCTGAGTATTCGTCGGATTCTGGCTGCTCTCTCCGATTTTCCCTCCGGCGGCGAGTTGTCTCCTTCTCCAAGTG
AAAATCGGTCGCCGTTTCTGATCCGCGGAGAATGTGCAATGGTGTCCGATGAAGGCAGTTCTTAA
mRNA sequenceShow/hide mRNA sequence
TAAAGCCTCAATTTCTTAAATAAAAAAAACTTCCACGTTTCTCCAATTCCTTTTTCCCCAATTATATATAAAAACCCTTCTTCGATTCTACTTCCACTTCATTCCATTTG
CTTCAATTTCTCCACGATGGAGATTGGCCATTTCGAAGGAATGCTAGCGACTGCGGCCGTGTTCGTTCTTGTGCAGATTCTGGTTTATTTAATTCTCTCTAAATCTTCCG
ACGTCTTCTCGAAGAACGCGAAGAGGTCTCTCAGTTTCAGACAGGTTCGATCTCTGAGTATTCGTCGGATTCTGGCTGCTCTCTCCGATTTTCCCTCCGGCGGCGAGTTG
TCTCCTTCTCCAAGTGAAAATCGGTCGCCGTTTCTGATCCGCGGAGAATGTGCAATGGTGTCCGATGAAGGCAGTTCTTAAATGAAGCTGCTGCTGGAATTCTTTTGTTC
CGTCATTTGTGTTTCATTTTTTCTATTTTGTGAATAATTATGCATATTTGTTAAATTATTAAATTATGTTAAATATTTGAAGTTACAGACTTACATGCTAATATTTGAAG
CTACGGACTTACATGCATGTTTGATAATTACGAATTTACGAGTCGACAATCCATTAGCT
Protein sequenceShow/hide protein sequence
MEIGHFEGMLATAAVFVLVQILVYLILSKSSDVFSKNAKRSLSFRQVRSLSIRRILAALSDFPSGGELSPSPSENRSPFLIRGECAMVSDEGSS