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Tan0002417 (gene) of Snake gourd v1 genome

Gene IDTan0002417
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG03:19152557..19157832
RNA-Seq ExpressionTan0002417
SyntenyTan0002417
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
A0A0A0KPT1 Uncharacterized protein2.5e-0423.74Show/hide
Query:  DQIARRLFLSVAKIKVKANDTGFISAFIDIPEDLVGGRISIQIRGLTIGISVDDSINWKAPIRGDSLSKKGELKEINDSIKWKGKSPIIEESYIIAVSPT
        +Q  R L    A++K++    G I A + +P +L G +I+++IR    G++V  + N  A    D+                     ++ ES +    P 
Subjt:  DQIARRLFLSVAKIKVKANDTGFISAFIDIPEDLVGGRISIQIRGLTIGISVDDSINWKAPIRGDSLSKKGELKEINDSIKWKGKSPIIEESYIIAVSPT

Query:  LNSRKISTFPIIGESHLNSEDNILLDSGANLKD-------LENIPLN---------LVGPSTSLSPTLSQPTLNAASFEEGPGSLQLESMNFTTVKEPII
          S  I +      +H  S D+   +  AN  +        E IP +         LVGP+ S SP+ +QP+L   +F+    +L+  + +  T +  + 
Subjt:  LNSRKISTFPIIGESHLNSEDNILLDSGANLKD-------LENIPLN---------LVGPSTSLSPTLSQPTLNAASFEEGPGSLQLESMNFTTVKEPII

Query:  PFTGSDTEAYLSNPISLKSAKTSEFHREPFDLEIFGNEPTIDSQLPVEIQPPLPIDL
         F+ S+ +    +P         +F    ++  +FG  PT +S L + I PP+P DL
Subjt:  PFTGSDTEAYLSNPISLKSAKTSEFHREPFDLEIFGNEPTIDSQLPVEIQPPLPIDL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGAAGTTTCCTTCAATCTTCGACCAAATAGCAAGGAGGTTGTTTTTGTCGGTTGCAAAAATTAAAGTGAAGGCAAATGATACGGGTTTCATCTCGGCATTCATTGA
TATTCCAGAGGACTTGGTCGGCGGTCGAATTTCTATCCAAATTCGAGGTCTCACTATCGGAATTTCTGTGGACGATAGCATTAATTGGAAAGCGCCGATTAGGGGAGATT
CCTTATCGAAAAAAGGGGAATTGAAGGAAATTAATGACTCAATTAAATGGAAAGGAAAATCACCGATTATTGAGGAATCATATATTATTGCGGTTTCACCCACGTTGAAT
TCGAGGAAGATCTCGACTTTTCCAATTATAGGGGAATCACATTTAAATTCGGAAGATAATATTCTCCTTGATTCTGGTGCAAATTTAAAGGATTTGGAAAATATCCCTCT
TAATTTGGTTGGGCCGTCAACATCTCTCTCACCCACCCTCTCTCAACCCACTTTAAATGCGGCTTCTTTTGAGGAAGGACCCGGTTCTCTCCAACTCGAATCCATGAATT
TTACAACAGTAAAAGAACCAATTATTCCCTTTACTGGCTCTGACACCGAGGCTTATCTTTCCAACCCAATTTCATTAAAATCCGCCAAGACCTCCGAATTTCATCGAGAA
CCTTTCGATTTGGAAATTTTTGGCAATGAACCTACCATTGACTCACAATTACCCGTCGAAATCCAACCACCCCTTCCGATTGACCTTTCTCCCTTACCTACAGTTACCCT
TCTCGAATCCGTACCTACTGTTCCCAGTGTTTTAAAAAGCCCTCTGGGGCGCGCGCCTCACCTCGAAGAGGCGAGGCGCATCTAA
mRNA sequenceShow/hide mRNA sequence
ATGTGGAAGTTTCCTTCAATCTTCGACCAAATAGCAAGGAGGTTGTTTTTGTCGGTTGCAAAAATTAAAGTGAAGGCAAATGATACGGGTTTCATCTCGGCATTCATTGA
TATTCCAGAGGACTTGGTCGGCGGTCGAATTTCTATCCAAATTCGAGGTCTCACTATCGGAATTTCTGTGGACGATAGCATTAATTGGAAAGCGCCGATTAGGGGAGATT
CCTTATCGAAAAAAGGGGAATTGAAGGAAATTAATGACTCAATTAAATGGAAAGGAAAATCACCGATTATTGAGGAATCATATATTATTGCGGTTTCACCCACGTTGAAT
TCGAGGAAGATCTCGACTTTTCCAATTATAGGGGAATCACATTTAAATTCGGAAGATAATATTCTCCTTGATTCTGGTGCAAATTTAAAGGATTTGGAAAATATCCCTCT
TAATTTGGTTGGGCCGTCAACATCTCTCTCACCCACCCTCTCTCAACCCACTTTAAATGCGGCTTCTTTTGAGGAAGGACCCGGTTCTCTCCAACTCGAATCCATGAATT
TTACAACAGTAAAAGAACCAATTATTCCCTTTACTGGCTCTGACACCGAGGCTTATCTTTCCAACCCAATTTCATTAAAATCCGCCAAGACCTCCGAATTTCATCGAGAA
CCTTTCGATTTGGAAATTTTTGGCAATGAACCTACCATTGACTCACAATTACCCGTCGAAATCCAACCACCCCTTCCGATTGACCTTTCTCCCTTACCTACAGTTACCCT
TCTCGAATCCGTACCTACTGTTCCCAGTGTTTTAAAAAGCCCTCTGGGGCGCGCGCCTCACCTCGAAGAGGCGAGGCGCATCTAA
Protein sequenceShow/hide protein sequence
MWKFPSIFDQIARRLFLSVAKIKVKANDTGFISAFIDIPEDLVGGRISIQIRGLTIGISVDDSINWKAPIRGDSLSKKGELKEINDSIKWKGKSPIIEESYIIAVSPTLN
SRKISTFPIIGESHLNSEDNILLDSGANLKDLENIPLNLVGPSTSLSPTLSQPTLNAASFEEGPGSLQLESMNFTTVKEPIIPFTGSDTEAYLSNPISLKSAKTSEFHRE
PFDLEIFGNEPTIDSQLPVEIQPPLPIDLSPLPTVTLLESVPTVPSVLKSPLGRAPHLEEARRI