CuGenDBv2

Gene ID	Tan0002425
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Antigenic heat-stable 120 kDa protein
Genome location	LG08:6541315..6545176
RNA-Seq Expression	Tan0002425
Synteny	Tan0002425
Gene Ontology terms	GO:0006415 - translational termination (biological process) GO:0005737 - cytoplasm (cellular component) GO:0016149 - translation release factor activity, codon specific (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_008453632.1 PREDICTED: uncharacterized protein LOC103494285 [Cucumis melo]

2.1e-89

95.21

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Query:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNNGLGKEI
        MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNNGLGKEI
Subjt:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNNGLGKEI

Query:  NDTVEKVFCRLSGKEPPLFPPQNGDMPSVKETENDKGKGKEPEDDYHKEKSHSVRKRSFNDMNGKEENNVADGAGENLAVPEEHSRSP
        NDTVEKVFCRLSGKEPPLF PQNGDMP VKETE +KGKGKEPED+YHKEKS  VRKRSFNDMNGKEEN VADGAGE+LAVPEEHSRSP
Subjt:  NDTVEKVFCRLSGKEPPLFPPQNGDMPSVKETENDKGKGKEPEDDYHKEKSHSVRKRSFNDMNGKEENNVADGAGENLAVPEEHSRSP

XP_022156356.1 uncharacterized protein LOC111023270 [Momordica charantia]

3.5e-89

93.62

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Query:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNNGLGKEI
        MSSSS+ITPEDVL+SLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFD+LRQELEAPVLEKASKSVWELILDNNGLGKEI
Subjt:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNNGLGKEI

Query:  NDTVEKVFCRLSGKEPPLFPPQNGDMPSVKETENDKGKGKEPEDDYHKEKSHSVRKRSFNDMNGKEENNVADGAGENLAVPEEHSRSP
        NDTVEKVFCRLSG+EPPLFPPQNGDM SVKE EN+KGKGKEPEDDY KEKSHSVRKRSFNDMNG+EENNVA+GAGENLA+PEE SRSP
Subjt:  NDTVEKVFCRLSGKEPPLFPPQNGDMPSVKETENDKGKGKEPEDDYHKEKSHSVRKRSFNDMNGKEENNVADGAGENLAVPEEHSRSP

XP_022938214.1 uncharacterized protein LOC111444361 [Cucurbita moschata]

5.4e-90

94.68

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Query:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNNGLGKEI
        MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDN GLGKEI
Subjt:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNNGLGKEI

Query:  NDTVEKVFCRLSGKEPPLFPPQNGDMPSVKETENDKGKGKEPEDDYHKEKSHSVRKRSFNDMNGKEENNVADGAGENLAVPEEHSRSP
        NDTVEKVFCRLSGKEPPLFPP+NGD+PSVKETENDKGKGKEPEDDYHKEKS  VRKRSF DMNGK+ENNV DGAGENLA  EEHSRSP
Subjt:  NDTVEKVFCRLSGKEPPLFPPQNGDMPSVKETENDKGKGKEPEDDYHKEKSHSVRKRSFNDMNGKEENNVADGAGENLAVPEEHSRSP

XP_023536782.1 uncharacterized protein LOC111798060 [Cucurbita pepo subsp. pepo]

1.2e-89

94.15

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Query:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNNGLGKEI
        MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDN GLGKEI
Subjt:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNNGLGKEI

Query:  NDTVEKVFCRLSGKEPPLFPPQNGDMPSVKETENDKGKGKEPEDDYHKEKSHSVRKRSFNDMNGKEENNVADGAGENLAVPEEHSRSP
        NDTVEKVFCRLSGKEPPLFPP+NGD+PSVKETENDKGKGKEPEDDYHKEKS  +RKRSF DMNGK+ENNV DGAGENLA  EEHSRSP
Subjt:  NDTVEKVFCRLSGKEPPLFPPQNGDMPSVKETENDKGKGKEPEDDYHKEKSHSVRKRSFNDMNGKEENNVADGAGENLAVPEEHSRSP

XP_038890481.1 uncharacterized protein LOC120080024 isoform X1 [Benincasa hispida]

2.0e-92

96.28

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Query:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNNGLGKEI
        M SSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNNGLGKEI
Subjt:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNNGLGKEI

Query:  NDTVEKVFCRLSGKEPPLFPPQNGDMPSVKETENDKGKGKEPEDDYHKEKSHSVRKRSFNDMNGKEENNVADGAGENLAVPEEHSRSP
        NDTVEKVFCRLSGKEPPLFPPQNGDMPSVKETEN+KGKGKEPED+YHKEKSH +RKRSFNDMNGKEEN VADGAGE+LAVPEEHSRSP
Subjt:  NDTVEKVFCRLSGKEPPLFPPQNGDMPSVKETENDKGKGKEPEDDYHKEKSHSVRKRSFNDMNGKEENNVADGAGENLAVPEEHSRSP

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LGM0 Uncharacterized protein

2.2e-89

93.62

Show/hide

Query:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNNGLGKEI
        MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNNGLGKEI
Subjt:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNNGLGKEI

Query:  NDTVEKVFCRLSGKEPPLFPPQNGDMPSVKETENDKGKGKEPEDDYHKEKSHSVRKRSFNDMNGKEENNVADGAGENLAVPEEHSRSP
        NDTVEKVFCRLSGKEPPLF PQNGDMP VKETE++KGKGKEPED+YHKEKS  +RKRSFNDMNGKEE+ +ADGAGE+LAVPEEHSRSP
Subjt:  NDTVEKVFCRLSGKEPPLFPPQNGDMPSVKETENDKGKGKEPEDDYHKEKSHSVRKRSFNDMNGKEENNVADGAGENLAVPEEHSRSP

A0A1S3BWQ6 uncharacterized protein LOC103494285

9.9e-90

95.21

Show/hide

Query:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNNGLGKEI
        MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNNGLGKEI
Subjt:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNNGLGKEI

Query:  NDTVEKVFCRLSGKEPPLFPPQNGDMPSVKETENDKGKGKEPEDDYHKEKSHSVRKRSFNDMNGKEENNVADGAGENLAVPEEHSRSP
        NDTVEKVFCRLSGKEPPLF PQNGDMP VKETE +KGKGKEPED+YHKEKS  VRKRSFNDMNGKEEN VADGAGE+LAVPEEHSRSP
Subjt:  NDTVEKVFCRLSGKEPPLFPPQNGDMPSVKETENDKGKGKEPEDDYHKEKSHSVRKRSFNDMNGKEENNVADGAGENLAVPEEHSRSP

A0A5D3BAZ9 Uncharacterized protein

9.9e-90

95.21

Show/hide

Query:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNNGLGKEI
        MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNNGLGKEI
Subjt:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNNGLGKEI

Query:  NDTVEKVFCRLSGKEPPLFPPQNGDMPSVKETENDKGKGKEPEDDYHKEKSHSVRKRSFNDMNGKEENNVADGAGENLAVPEEHSRSP
        NDTVEKVFCRLSGKEPPLF PQNGDMP VKETE +KGKGKEPED+YHKEKS  VRKRSFNDMNGKEEN VADGAGE+LAVPEEHSRSP
Subjt:  NDTVEKVFCRLSGKEPPLFPPQNGDMPSVKETENDKGKGKEPEDDYHKEKSHSVRKRSFNDMNGKEENNVADGAGENLAVPEEHSRSP

A0A6J1DQE8 uncharacterized protein LOC111023270

1.7e-89

93.62

Show/hide

Query:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNNGLGKEI
        MSSSS+ITPEDVL+SLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFD+LRQELEAPVLEKASKSVWELILDNNGLGKEI
Subjt:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNNGLGKEI

Query:  NDTVEKVFCRLSGKEPPLFPPQNGDMPSVKETENDKGKGKEPEDDYHKEKSHSVRKRSFNDMNGKEENNVADGAGENLAVPEEHSRSP
        NDTVEKVFCRLSG+EPPLFPPQNGDM SVKE EN+KGKGKEPEDDY KEKSHSVRKRSFNDMNG+EENNVA+GAGENLA+PEE SRSP
Subjt:  NDTVEKVFCRLSGKEPPLFPPQNGDMPSVKETENDKGKGKEPEDDYHKEKSHSVRKRSFNDMNGKEENNVADGAGENLAVPEEHSRSP

A0A6J1FDE9 uncharacterized protein LOC111444361

2.6e-90

94.68

Show/hide

Query:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNNGLGKEI
        MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDN GLGKEI
Subjt:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNNGLGKEI

Query:  NDTVEKVFCRLSGKEPPLFPPQNGDMPSVKETENDKGKGKEPEDDYHKEKSHSVRKRSFNDMNGKEENNVADGAGENLAVPEEHSRSP
        NDTVEKVFCRLSGKEPPLFPP+NGD+PSVKETENDKGKGKEPEDDYHKEKS  VRKRSF DMNGK+ENNV DGAGENLA  EEHSRSP
Subjt:  NDTVEKVFCRLSGKEPPLFPPQNGDMPSVKETENDKGKGKEPEDDYHKEKSHSVRKRSFNDMNGKEENNVADGAGENLAVPEEHSRSP

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G12530.1 unknown protein

6.7e-14

31.44

Show/hide

Query:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNNGLGKEI
        M  +  I+ E+V+E L +DG  D LRLKII +LK NE+L+N  I +V++S  L   GA+    R+L DA+ +E+ + +L + S  +W +I   +G+  EI
Subjt:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNNGLGKEI

Query:  NDTVEKVFCRLSGKEPPLFPPQNGDMPSVKETEND-KGKGKEPEDDYH----KEKSHSVRKRSFNDMNGKE-ENNVADGAGENLAVPEEHSRSP
         +TV+ V+  LS       P       S +E E+      KE   D++     ++   + K +  D  G+   ++V D  GE     EE    P
Subjt:  NDTVEKVFCRLSGKEPPLFPPQNGDMPSVKETEND-KGKGKEPEDDYH----KEKSHSVRKRSFNDMNGKE-ENNVADGAGENLAVPEEHSRSP

AT1G56420.1 unknown protein

3.1e-51

66.87

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Query:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNNGLGKEI
        MSSSSVI PEDVLE LMNDGTID+LRL+IINQLKANEELK+TTIKM E+SKVLNTPGAEKQTKRELFDALRQELE PVLEKASKSVW+LI++ +GLGKEI
Subjt:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNNGLGKEI

Query:  NDTVEKVFCRLSGKEPPLFPPQNGDMPSVKETENDKGKGKEPEDDYHKEKSHSVRKRSFNDMNGKE
        N+TVE+VFC LSG+EPP +   N     V++T  +  K  E +D          +KRS +++N  E
Subjt:  NDTVEKVFCRLSGKEPPLFPPQNGDMPSVKETENDKGKGKEPEDDYHKEKSHSVRKRSFNDMNGKE

Sequences

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CDS sequence

Show/hide CDS sequence

ATGAGTTCGTCTTCAGTAATAACTCCAGAAGATGTGTTGGAGTCGCTGATGAATGATGGTACTATCGATTCTCTCAGGTTGAAGATCATCAACCAGCTCAAAGCCAATGA
GGAGCTTAAGAATACCACCATTAAAATGGTAGAACAGAGCAAAGTCCTCAATACCCCTGGGGCAGAGAAACAGACCAAAAGAGAGTTATTTGATGCTCTTCGACAGGAAC
TTGAGGCACCAGTGCTTGAGAAAGCTTCTAAATCTGTTTGGGAATTGATTTTAGACAACAATGGATTGGGCAAAGAAATAAACGACACAGTCGAAAAAGTATTTTGTCGA
TTGAGTGGCAAGGAACCTCCATTGTTTCCTCCTCAAAATGGGGATATGCCATCAGTCAAAGAAACCGAAAACGATAAAGGGAAGGGAAAAGAACCTGAAGATGACTATCA
CAAGGAGAAATCACACTCTGTTAGGAAAAGGAGTTTCAATGACATGAATGGAAAAGAGGAAAACAATGTTGCAGATGGAGCTGGAGAAAATCTAGCTGTACCTGAAGAAC
ATAGTAGGTCACCTTAA

mRNA sequence

Show/hide mRNA sequence

GCGCGGAGCATATATGTACATAGCCGATATCTTTGAGGACCTGAGTTAGAAGAAAGAAGCTCTCATCGAAATTACTTTGGCGGTAGCCCTTAGATTAAACCAACGAGCAG
GTGCGAAAGATTTGTTTGATTTCTGAAATCACATTGAAATAACCCATCTACTTCAATCATTTATAATGTTTCTGTTTCAGATTGAAAACATCTCTGTTGCGATTTTGAAG
TGAGGAGGAAAAAAAAATTAAGAGAAAAGGGGGCAGCGGAATCGAGAAGGAGATTCATGAGTTCGTCTTCAGTAATAACTCCAGAAGATGTGTTGGAGTCGCTGATGAAT
GATGGTACTATCGATTCTCTCAGGTTGAAGATCATCAACCAGCTCAAAGCCAATGAGGAGCTTAAGAATACCACCATTAAAATGGTAGAACAGAGCAAAGTCCTCAATAC
CCCTGGGGCAGAGAAACAGACCAAAAGAGAGTTATTTGATGCTCTTCGACAGGAACTTGAGGCACCAGTGCTTGAGAAAGCTTCTAAATCTGTTTGGGAATTGATTTTAG
ACAACAATGGATTGGGCAAAGAAATAAACGACACAGTCGAAAAAGTATTTTGTCGATTGAGTGGCAAGGAACCTCCATTGTTTCCTCCTCAAAATGGGGATATGCCATCA
GTCAAAGAAACCGAAAACGATAAAGGGAAGGGAAAAGAACCTGAAGATGACTATCACAAGGAGAAATCACACTCTGTTAGGAAAAGGAGTTTCAATGACATGAATGGAAA
AGAGGAAAACAATGTTGCAGATGGAGCTGGAGAAAATCTAGCTGTACCTGAAGAACATAGTAGGTCACCTTAATTGAGTTTGCAGACAGGAATCACATCACGAACCATGC
TATGACAACGGGTCTCGCATCTGTAGTCTGCGATCATTGGTTCGAGTTTGTCCAACATAATCTAATGAGCATGGCGTGTCTCAAACACGAATGAAATCTGACACTGCACG
CCACACACGCAATTGATGGGAGGCCAAAATTTTGTTTGTGTGGATGTATATGAACACTTCCATGATCTTTAAGCTTATGGTTAGGAAATAGGATGGTTAGTCGTAAAAAA
CTAGCTTTTATAATCTAATCTATGCATGTCAATGCTGTGAAGAACAATATAAATATTGATTGGCGTCGTTGTGCAGTACTTAGTAAATTTTATCACTGATTTCAGTTTTC
AAGATTCTTAATTTTTTTCTTCTTTCCTTCTGGGAGTGTTGTGTACTGCTGGGAATTATGTTGAATTAGATTTGAATTCTAACTTCAGTTTAAATTAGATTTGACTGGTG
GTCCAAAGGCAG

Protein sequence

Show/hide protein sequence

MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNNGLGKEINDTVEKVFCR
LSGKEPPLFPPQNGDMPSVKETENDKGKGKEPEDDYHKEKSHSVRKRSFNDMNGKEENNVADGAGENLAVPEEHSRSP

Tan0002425 (gene) of Snake gourd v1 genome