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Tan0002427 (gene) of Snake gourd v1 genome

Gene IDTan0002427
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionChromosome transmission fidelity protein
Genome locationLG05:6072606..6072812
RNA-Seq ExpressionTan0002427
SyntenyTan0002427
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008448201.1 PREDICTED: uncharacterized protein LOC103490465 [Cucumis melo]7.1e-3294.12Show/hide
Query:  MVCFCFLVDQKRRIRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR
        MV FCF+VDQKR++RRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR
Subjt:  MVCFCFLVDQKRRIRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR

XP_022140680.1 uncharacterized protein LOC111011282 [Momordica charantia]1.4e-3294.12Show/hide
Query:  MVCFCFLVDQKRRIRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR
        MVCFCFLVD+KRR+RRSRPAPGICSRCGGGA VADMKTATRFCHVPFYWKSWRA+ICTFCGSVLRSYR
Subjt:  MVCFCFLVDQKRRIRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR

XP_022944461.1 uncharacterized protein LOC111448908 [Cucurbita moschata]7.5e-34100Show/hide
Query:  MVCFCFLVDQKRRIRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR
        MVCFCFLVDQKRRIRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR
Subjt:  MVCFCFLVDQKRRIRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR

XP_022986417.1 uncharacterized protein LOC111484159 [Cucurbita maxima]2.2e-3398.53Show/hide
Query:  MVCFCFLVDQKRRIRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR
        MVCFCFLVDQKRRI+RSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR
Subjt:  MVCFCFLVDQKRRIRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR

XP_038902212.1 uncharacterized protein LOC120088840 [Benincasa hispida]3.7e-3395.59Show/hide
Query:  MVCFCFLVDQKRRIRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR
        MVCFCF+VDQKR++RRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR
Subjt:  MVCFCFLVDQKRRIRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR

TrEMBL top hitse value%identityAlignment
A0A1S3BJR8 uncharacterized protein LOC1034904653.4e-3294.12Show/hide
Query:  MVCFCFLVDQKRRIRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR
        MV FCF+VDQKR++RRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR
Subjt:  MVCFCFLVDQKRRIRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR

A0A6J1CFS7 uncharacterized protein LOC1110112826.9e-3394.12Show/hide
Query:  MVCFCFLVDQKRRIRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR
        MVCFCFLVD+KRR+RRSRPAPGICSRCGGGA VADMKTATRFCHVPFYWKSWRA+ICTFCGSVLRSYR
Subjt:  MVCFCFLVDQKRRIRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR

A0A6J1FUH3 uncharacterized protein LOC1114489083.7e-34100Show/hide
Query:  MVCFCFLVDQKRRIRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR
        MVCFCFLVDQKRRIRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR
Subjt:  MVCFCFLVDQKRRIRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR

A0A6J1J7G8 uncharacterized protein LOC1114841591.1e-3398.53Show/hide
Query:  MVCFCFLVDQKRRIRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR
        MVCFCFLVDQKRRI+RSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR
Subjt:  MVCFCFLVDQKRRIRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR

A0A6P6S4N3 uncharacterized protein LOC1136877971.1e-3086.76Show/hide
Query:  MVCFCFLVDQKRRIRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR
        MVCFCFLVDQ R++RRS+PA GICSRCGGGASVADMKTATRFCHVPFYWK+WRA+ICTFCG++LRSYR
Subjt:  MVCFCFLVDQKRRIRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G52855.1 unknown protein1.3e-2872.06Show/hide
Query:  MVCFCFLVDQKRRIRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR
        MVCFCFLVDQ R+++RS+PA G CSRCG  AS+ADMKT+TRFC +P YW+SWRA++C+FCGSVL+SYR
Subjt:  MVCFCFLVDQKRRIRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR

AT2G20835.1 unknown protein3.4e-2464.18Show/hide
Query:  MVCFCFLVDQKRRIRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSY
        M  FCFLVDQ++++R  +PA G+CSRCGGGA VADM+T+TRFC VPFY K+W+A++C  CG+VL+SY
Subjt:  MVCFCFLVDQKRRIRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSY

AT3G15534.1 unknown protein1.9e-2772.06Show/hide
Query:  MVCFCFLVDQKRRIRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR
        MVCFCFLVDQKR+++ S+PA G CSRCG GA VADMKT+TRFC +P Y +SWRA++C+FCGSVL+SYR
Subjt:  MVCFCFLVDQKRRIRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR

AT4G29905.1 unknown protein3.0e-0436.54Show/hide
Query:  DQKRRIRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFC
        ++K  + R + APG+C  CGG  S  D++T   FC +P  +K  R   C+ C
Subjt:  DQKRRIRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTGCTTTTGCTTTCTGGTGGATCAGAAGCGGAGGATACGGCGGAGTAGACCGGCGCCAGGAATTTGCTCGAGGTGCGGCGGAGGAGCCAGTGTAGCCGATATGAA
AACCGCCACCAGATTCTGTCACGTTCCCTTTTACTGGAAATCTTGGAGAGCCCTTATCTGTACCTTTTGTGGATCTGTTCTTCGATCCTACCGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTTGCTTTTGCTTTCTGGTGGATCAGAAGCGGAGGATACGGCGGAGTAGACCGGCGCCAGGAATTTGCTCGAGGTGCGGCGGAGGAGCCAGTGTAGCCGATATGAA
AACCGCCACCAGATTCTGTCACGTTCCCTTTTACTGGAAATCTTGGAGAGCCCTTATCTGTACCTTTTGTGGATCTGTTCTTCGATCCTACCGCTAA
Protein sequenceShow/hide protein sequence
MVCFCFLVDQKRRIRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR