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Tan0002430 (gene) of Snake gourd v1 genome

Gene IDTan0002430
OrganismTrichosanthes anguina (Snake gourd v1)
Description60S acidic ribosomal protein P1-like
Genome locationLG10:593846..595215
RNA-Seq ExpressionTan0002430
SyntenyTan0002430
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0006414 - translational elongation (biological process)
GO:0032147 - activation of protein kinase activity (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0030295 - protein kinase activator activity (molecular function)
GO:0043021 - ribonucleoprotein complex binding (molecular function)
InterPro domainsIPR027534 - Ribosomal protein L12/P1/P2 family
IPR038716 - Ribosomal protein P1/P2, N-terminal domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597015.1 60S acidic ribosomal protein P1-2, partial [Cucurbita argyrosperma subsp. sororia]4.6e-4491.07Show/hide
Query:  MSTGEIACSYAAMILYDDNIPITPEKLATLVKAAKVNVESYWFSLFAKLAEKRNIGDLILNVGAGGGAPVAAAVPAGGAAGGAAAAAAPPPEEKKEEPKE
        MS GEIACSYAA+ILYDDNIP+T EKLATLVKAA V  ESYWFSLFAKLAEKRNIGDLI+NVGAGGGA VAAAVPAGG AGGAAAAAAPPPEEKKEEPKE
Subjt:  MSTGEIACSYAAMILYDDNIPITPEKLATLVKAAKVNVESYWFSLFAKLAEKRNIGDLILNVGAGGGAPVAAAVPAGGAAGGAAAAAAPPPEEKKEEPKE

Query:  ESDDDMGFSLFD
        ESDDDMGFSLFD
Subjt:  ESDDDMGFSLFD

XP_004133766.1 60S acidic ribosomal protein P1 [Cucumis sativus]3.5e-4490.27Show/hide
Query:  MSTGEIACSYAAMILYDDNIPITPEKLATLVKAAKV-NVESYWFSLFAKLAEKRNIGDLILNVGAGGGAPVAAAVPAGGAAGGAAAAAAPPPEEKKEEPK
        MSTGEIACSYAA+ILYDDNIPIT EK+ATLVKAAKV +VESYW+ LFAKLAEKR+IGDLILNVGAGGGA VAAA PAGGAAGG AAAAAPPPEEKKEEPK
Subjt:  MSTGEIACSYAAMILYDDNIPITPEKLATLVKAAKV-NVESYWFSLFAKLAEKRNIGDLILNVGAGGGAPVAAAVPAGGAAGGAAAAAAPPPEEKKEEPK

Query:  EESDDDMGFSLFD
        EESDDDMGFSLFD
Subjt:  EESDDDMGFSLFD

XP_008437779.1 PREDICTED: 60S acidic ribosomal protein P1-like [Cucumis melo]2.0e-4491.15Show/hide
Query:  MSTGEIACSYAAMILYDDNIPITPEKLATLVKAAKV-NVESYWFSLFAKLAEKRNIGDLILNVGAGGGAPVAAAVPAGGAAGGAAAAAAPPPEEKKEEPK
        MSTGEIACSYAA+ILYDDNIPIT EK+ATLVKAA V +VESYW+SLFAKLAEKRNIGDLILNVGAGGGA VAAAVPAGGAA G AAAAAPPPEEKKEEPK
Subjt:  MSTGEIACSYAAMILYDDNIPITPEKLATLVKAAKV-NVESYWFSLFAKLAEKRNIGDLILNVGAGGGAPVAAAVPAGGAAGGAAAAAAPPPEEKKEEPK

Query:  EESDDDMGFSLFD
        EESDDDMGFSLFD
Subjt:  EESDDDMGFSLFD

XP_022974253.1 60S acidic ribosomal protein P1-like [Cucurbita maxima]3.5e-4491.07Show/hide
Query:  MSTGEIACSYAAMILYDDNIPITPEKLATLVKAAKVNVESYWFSLFAKLAEKRNIGDLILNVGAGGGAPVAAAVPAGGAAGGAAAAAAPPPEEKKEEPKE
        MS GEIACSYAA+ILYDDNIP+T EKLATLVKAA V+ ESYWFSLFAKLAEKRNIGDLI+NVGAGGGA VAAAVPAGG AGGAAAAAAPPPEEKKEEPKE
Subjt:  MSTGEIACSYAAMILYDDNIPITPEKLATLVKAAKVNVESYWFSLFAKLAEKRNIGDLILNVGAGGGAPVAAAVPAGGAAGGAAAAAAPPPEEKKEEPKE

Query:  ESDDDMGFSLFD
        ESDDDMGFSLFD
Subjt:  ESDDDMGFSLFD

XP_038883955.1 60S acidic ribosomal protein P1-like [Benincasa hispida]4.6e-4490.27Show/hide
Query:  MSTGEIACSYAAMILYDDNIPITPEKLATLVKAAKV-NVESYWFSLFAKLAEKRNIGDLILNVGAGGGAPVAAAVPAGGAAGGAAAAAAPPPEEKKEEPK
        MSTGEIACSYAA+ILYDDNIPIT EK+AT+VKAA V +VESYWF LFAKLAEKRNIGDLILNVGAGGGA VAAAVPA G AGGAAAAAAPPPEEKKEEPK
Subjt:  MSTGEIACSYAAMILYDDNIPITPEKLATLVKAAKV-NVESYWFSLFAKLAEKRNIGDLILNVGAGGGAPVAAAVPAGGAAGGAAAAAAPPPEEKKEEPK

Query:  EESDDDMGFSLFD
        EESDDDMGFSLFD
Subjt:  EESDDDMGFSLFD

TrEMBL top hitse value%identityAlignment
A0A0A0L5M7 Uncharacterized protein1.7e-4490.27Show/hide
Query:  MSTGEIACSYAAMILYDDNIPITPEKLATLVKAAKV-NVESYWFSLFAKLAEKRNIGDLILNVGAGGGAPVAAAVPAGGAAGGAAAAAAPPPEEKKEEPK
        MSTGEIACSYAA+ILYDDNIPIT EK+ATLVKAAKV +VESYW+ LFAKLAEKR+IGDLILNVGAGGGA VAAA PAGGAAGG AAAAAPPPEEKKEEPK
Subjt:  MSTGEIACSYAAMILYDDNIPITPEKLATLVKAAKV-NVESYWFSLFAKLAEKRNIGDLILNVGAGGGAPVAAAVPAGGAAGGAAAAAAPPPEEKKEEPK

Query:  EESDDDMGFSLFD
        EESDDDMGFSLFD
Subjt:  EESDDDMGFSLFD

A0A1S3AUG9 60S acidic ribosomal protein P1-like9.9e-4591.15Show/hide
Query:  MSTGEIACSYAAMILYDDNIPITPEKLATLVKAAKV-NVESYWFSLFAKLAEKRNIGDLILNVGAGGGAPVAAAVPAGGAAGGAAAAAAPPPEEKKEEPK
        MSTGEIACSYAA+ILYDDNIPIT EK+ATLVKAA V +VESYW+SLFAKLAEKRNIGDLILNVGAGGGA VAAAVPAGGAA G AAAAAPPPEEKKEEPK
Subjt:  MSTGEIACSYAAMILYDDNIPITPEKLATLVKAAKV-NVESYWFSLFAKLAEKRNIGDLILNVGAGGGAPVAAAVPAGGAAGGAAAAAAPPPEEKKEEPK

Query:  EESDDDMGFSLFD
        EESDDDMGFSLFD
Subjt:  EESDDDMGFSLFD

A0A5D3DB57 60S acidic ribosomal protein P1-like9.9e-4591.15Show/hide
Query:  MSTGEIACSYAAMILYDDNIPITPEKLATLVKAAKV-NVESYWFSLFAKLAEKRNIGDLILNVGAGGGAPVAAAVPAGGAAGGAAAAAAPPPEEKKEEPK
        MSTGEIACSYAA+ILYDDNIPIT EK+ATLVKAA V +VESYW+SLFAKLAEKRNIGDLILNVGAGGGA VAAAVPAGGAA G AAAAAPPPEEKKEEPK
Subjt:  MSTGEIACSYAAMILYDDNIPITPEKLATLVKAAKV-NVESYWFSLFAKLAEKRNIGDLILNVGAGGGAPVAAAVPAGGAAGGAAAAAAPPPEEKKEEPK

Query:  EESDDDMGFSLFD
        EESDDDMGFSLFD
Subjt:  EESDDDMGFSLFD

A0A6J1GHG1 60S acidic ribosomal protein P1-like2.2e-4491.07Show/hide
Query:  MSTGEIACSYAAMILYDDNIPITPEKLATLVKAAKVNVESYWFSLFAKLAEKRNIGDLILNVGAGGGAPVAAAVPAGGAAGGAAAAAAPPPEEKKEEPKE
        MS GEIACSYAA+ILYDDNIP+T EKLATLVKAA V  ESYWFSLFAKLAEKRNIGDLI+NVGAGGGA VAAAVPAGG AGGAAAAAAPPPEEKKEEPKE
Subjt:  MSTGEIACSYAAMILYDDNIPITPEKLATLVKAAKVNVESYWFSLFAKLAEKRNIGDLILNVGAGGGAPVAAAVPAGGAAGGAAAAAAPPPEEKKEEPKE

Query:  ESDDDMGFSLFD
        ESDDDMGFSLFD
Subjt:  ESDDDMGFSLFD

A0A6J1ICK4 60S acidic ribosomal protein P1-like1.7e-4491.07Show/hide
Query:  MSTGEIACSYAAMILYDDNIPITPEKLATLVKAAKVNVESYWFSLFAKLAEKRNIGDLILNVGAGGGAPVAAAVPAGGAAGGAAAAAAPPPEEKKEEPKE
        MS GEIACSYAA+ILYDDNIP+T EKLATLVKAA V+ ESYWFSLFAKLAEKRNIGDLI+NVGAGGGA VAAAVPAGG AGGAAAAAAPPPEEKKEEPKE
Subjt:  MSTGEIACSYAAMILYDDNIPITPEKLATLVKAAKVNVESYWFSLFAKLAEKRNIGDLILNVGAGGGAPVAAAVPAGGAAGGAAAAAAPPPEEKKEEPKE

Query:  ESDDDMGFSLFD
        ESDDDMGFSLFD
Subjt:  ESDDDMGFSLFD

SwissProt top hitse value%identityAlignment
O23095 60S acidic ribosomal protein P1-24.6e-3168.97Show/hide
Query:  MST-GEIACSYAAMILYDDNIPITPEKLATLVKAAKVNVESYWFSLFAKLAEKRNIGDLILNVGA---GGGAPVAAAVPAGGAAGGAAAAAAPPPEEKKE
        MST GE+ACSYA MIL D+ I IT +K+ATLVKAA V +ESYW  LFAK+AEKRN+ DLI+NVGA   GGGAPV+AA P   AA G AAAAAP  EEKK+
Subjt:  MST-GEIACSYAAMILYDDNIPITPEKLATLVKAAKVNVESYWFSLFAKLAEKRNIGDLILNVGA---GGGAPVAAAVPAGGAAGGAAAAAAPPPEEKKE

Query:  EPKEESDDDMGFSLFD
        EP EESD D+GF LFD
Subjt:  EPKEESDDDMGFSLFD

P29763 60S acidic ribosomal protein P11.3e-2560.71Show/hide
Query:  MSTGEIACSYAAMILYDDNIPITPEKLATLVKAAKVNVESYWFSLFAKLAEKRNIGDLILNVGAGGGAPVAAAVPAGGAAGGAAAAAAPPPEEKKEEPKE
        MST E+AC+YAA+IL+DD + IT + + T+ KAA V VE YW +LFAKL  K+++ DLI NVGAGGGA  AAA P   AAGGA AA A P +E+K+EP E
Subjt:  MSTGEIACSYAAMILYDDNIPITPEKLATLVKAAKVNVESYWFSLFAKLAEKRNIGDLILNVGAGGGAPVAAAVPAGGAAGGAAAAAAPPPEEKKEEPKE

Query:  ESDDDMGFSLFD
        E  +DMGFSLFD
Subjt:  ESDDDMGFSLFD

P52855 60S acidic ribosomal protein P14.4e-3473.45Show/hide
Query:  MSTGEIACSYAAMILYDDNIPITPEKLATLVKAAKVNVESYWFSLFAKLAEKRNIGDLILNVGAGGG-APVAAAVPAGGAAGGAAAAAAPPPEEKKEEPK
        M++GE+AC YAA+IL DD I IT EK+AT+VKAA + VESYW +LFAKL EKRN+ DLIL+VG+GGG APVAAA P    AGGAAAAAAP  EEKKEE K
Subjt:  MSTGEIACSYAAMILYDDNIPITPEKLATLVKAAKVNVESYWFSLFAKLAEKRNIGDLILNVGAGGG-APVAAAVPAGGAAGGAAAAAAPPPEEKKEEPK

Query:  EESDDDMGFSLFD
        EESDDDMGFSLFD
Subjt:  EESDDDMGFSLFD

Q8LCW9 60S acidic ribosomal protein P1-12.3e-3068.7Show/hide
Query:  MST-GEIACSYAAMILYDDNIPITPEKLATLVKAAKVNVESYWFSLFAKLAEKRNIGDLILNVGA--GGGAPVAAAVPAGGAAGGAAAAAAPPPEEKKEE
        MST GE+ACSYA MIL D+ I IT +K+ATLVKAA V++ESYW  LFAK+AEKRN+ DLI+NVGA  GGGAPVAAA P   AAGG AAAA    E+KK+E
Subjt:  MST-GEIACSYAAMILYDDNIPITPEKLATLVKAAKVNVESYWFSLFAKLAEKRNIGDLILNVGA--GGGAPVAAAVPAGGAAGGAAAAAAPPPEEKKEE

Query:  PKEESDDDMGFSLFD
        P EESD D+GF LFD
Subjt:  PKEESDDDMGFSLFD

Q8LEQ0 60S acidic ribosomal protein P1-36.0e-3169.57Show/hide
Query:  MST-GEIACSYAAMILYDDNIPITPEKLATLVKAAKVNVESYWFSLFAKLAEKRNIGDLILNVGA--GGGAPVAAAVPAGGAAGGAAAAAAPPPEEKKEE
        MST GE+ACSYA MIL D+ I IT +K+ATLVKAA V +ESYW  LFAK+AEKRN+ DLI+NVGA  GGGAPVAAA PA G  GGAAAAA    E+KK+E
Subjt:  MST-GEIACSYAAMILYDDNIPITPEKLATLVKAAKVNVESYWFSLFAKLAEKRNIGDLILNVGA--GGGAPVAAAVPAGGAAGGAAAAAAPPPEEKKEE

Query:  PKEESDDDMGFSLFD
        P EESD D+GF LFD
Subjt:  PKEESDDDMGFSLFD

Arabidopsis top hitse value%identityAlignment
AT1G01100.1 60S acidic ribosomal protein family1.6e-3168.7Show/hide
Query:  MST-GEIACSYAAMILYDDNIPITPEKLATLVKAAKVNVESYWFSLFAKLAEKRNIGDLILNVGA--GGGAPVAAAVPAGGAAGGAAAAAAPPPEEKKEE
        MST GE+ACSYA MIL D+ I IT +K+ATLVKAA V++ESYW  LFAK+AEKRN+ DLI+NVGA  GGGAPVAAA P   AAGG AAAA    E+KK+E
Subjt:  MST-GEIACSYAAMILYDDNIPITPEKLATLVKAAKVNVESYWFSLFAKLAEKRNIGDLILNVGA--GGGAPVAAAVPAGGAAGGAAAAAAPPPEEKKEE

Query:  PKEESDDDMGFSLFD
        P EESD D+GF LFD
Subjt:  PKEESDDDMGFSLFD

AT4G00810.1 60S acidic ribosomal protein family3.3e-3268.97Show/hide
Query:  MST-GEIACSYAAMILYDDNIPITPEKLATLVKAAKVNVESYWFSLFAKLAEKRNIGDLILNVGA---GGGAPVAAAVPAGGAAGGAAAAAAPPPEEKKE
        MST GE+ACSYA MIL D+ I IT +K+ATLVKAA V +ESYW  LFAK+AEKRN+ DLI+NVGA   GGGAPV+AA P   AA G AAAAAP  EEKK+
Subjt:  MST-GEIACSYAAMILYDDNIPITPEKLATLVKAAKVNVESYWFSLFAKLAEKRNIGDLILNVGA---GGGAPVAAAVPAGGAAGGAAAAAAPPPEEKKE

Query:  EPKEESDDDMGFSLFD
        EP EESD D+GF LFD
Subjt:  EPKEESDDDMGFSLFD

AT4G00810.2 60S acidic ribosomal protein family3.3e-3268.97Show/hide
Query:  MST-GEIACSYAAMILYDDNIPITPEKLATLVKAAKVNVESYWFSLFAKLAEKRNIGDLILNVGA---GGGAPVAAAVPAGGAAGGAAAAAAPPPEEKKE
        MST GE+ACSYA MIL D+ I IT +K+ATLVKAA V +ESYW  LFAK+AEKRN+ DLI+NVGA   GGGAPV+AA P   AA G AAAAAP  EEKK+
Subjt:  MST-GEIACSYAAMILYDDNIPITPEKLATLVKAAKVNVESYWFSLFAKLAEKRNIGDLILNVGA---GGGAPVAAAVPAGGAAGGAAAAAAPPPEEKKE

Query:  EPKEESDDDMGFSLFD
        EP EESD D+GF LFD
Subjt:  EPKEESDDDMGFSLFD

AT5G47700.1 60S acidic ribosomal protein family4.3e-3269.57Show/hide
Query:  MST-GEIACSYAAMILYDDNIPITPEKLATLVKAAKVNVESYWFSLFAKLAEKRNIGDLILNVGA--GGGAPVAAAVPAGGAAGGAAAAAAPPPEEKKEE
        MST GE+ACSYA MIL D+ I IT +K+ATLVKAA V +ESYW  LFAK+AEKRN+ DLI+NVGA  GGGAPVAAA PA G  GGAAAAA    E+KK+E
Subjt:  MST-GEIACSYAAMILYDDNIPITPEKLATLVKAAKVNVESYWFSLFAKLAEKRNIGDLILNVGA--GGGAPVAAAVPAGGAAGGAAAAAAPPPEEKKEE

Query:  PKEESDDDMGFSLFD
        P EESD D+GF LFD
Subjt:  PKEESDDDMGFSLFD

AT5G47700.2 60S acidic ribosomal protein family4.3e-3269.57Show/hide
Query:  MST-GEIACSYAAMILYDDNIPITPEKLATLVKAAKVNVESYWFSLFAKLAEKRNIGDLILNVGA--GGGAPVAAAVPAGGAAGGAAAAAAPPPEEKKEE
        MST GE+ACSYA MIL D+ I IT +K+ATLVKAA V +ESYW  LFAK+AEKRN+ DLI+NVGA  GGGAPVAAA PA G  GGAAAAA    E+KK+E
Subjt:  MST-GEIACSYAAMILYDDNIPITPEKLATLVKAAKVNVESYWFSLFAKLAEKRNIGDLILNVGA--GGGAPVAAAVPAGGAAGGAAAAAAPPPEEKKEE

Query:  PKEESDDDMGFSLFD
        P EESD D+GF LFD
Subjt:  PKEESDDDMGFSLFD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGACCGGAGAAATTGCTTGCTCCTATGCTGCTATGATCCTCTACGATGATAACATCCCTATTACCCCAGAGAAGCTTGCCACGCTTGTGAAAGCTGCTAAAGTGAA
TGTGGAGTCTTACTGGTTCAGCCTTTTTGCTAAGCTTGCTGAGAAGCGTAACATTGGGGATTTGATCCTGAATGTTGGGGCTGGCGGAGGTGCCCCAGTCGCGGCTGCCG
TCCCAGCTGGTGGAGCTGCTGGTGGTGCTGCTGCCGCAGCTGCTCCTCCTCCTGAAGAGAAGAAGGAGGAACCAAAGGAAGAGAGTGACGATGATATGGGATTCAGTTTG
TTTGATTAG
mRNA sequenceShow/hide mRNA sequence
GTCCAAGCAGCGTTCCAGAAATAATGCAAGCCCACATCTGAAGCTTCAATAAAAACCCGACCTTCAGGAGCTTCCCAAACCCTAGAACGCTTCCGTGTTGCGCAGCGAAG
AACAGACTCTTTAGAGCCTCCGACATCGCCTATTTCTTCTGTGAAAAATGTCGACCGGAGAAATTGCTTGCTCCTATGCTGCTATGATCCTCTACGATGATAACATCCCT
ATTACCCCAGAGAAGCTTGCCACGCTTGTGAAAGCTGCTAAAGTGAATGTGGAGTCTTACTGGTTCAGCCTTTTTGCTAAGCTTGCTGAGAAGCGTAACATTGGGGATTT
GATCCTGAATGTTGGGGCTGGCGGAGGTGCCCCAGTCGCGGCTGCCGTCCCAGCTGGTGGAGCTGCTGGTGGTGCTGCTGCCGCAGCTGCTCCTCCTCCTGAAGAGAAGA
AGGAGGAACCAAAGGAAGAGAGTGACGATGATATGGGATTCAGTTTGTTTGATTAGGTCATATGGCTTTGCATATTTCGAACTAGGTTGATTATCTTTTGAATACCGGAG
CCTCTCTTGTTTTATTTACAGATATGTAATTTTGGACATCATGACATTTGCCAGAAGTTTTGATTTGAATATGATCTGATTGCAACTTTTCAGTTGAGATAAATTATATT
TTATGCATCTTTATGTCCTCCCAATACGCTAGATATTGAAATGCTG
Protein sequenceShow/hide protein sequence
MSTGEIACSYAAMILYDDNIPITPEKLATLVKAAKVNVESYWFSLFAKLAEKRNIGDLILNVGAGGGAPVAAAVPAGGAAGGAAAAAAPPPEEKKEEPKEESDDDMGFSL
FD