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Tan0002433 (gene) of Snake gourd v1 genome

Gene IDTan0002433
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG05:66826112..66826381
RNA-Seq ExpressionTan0002433
SyntenyTan0002433
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022158565.1 uncharacterized protein LOC111025018 [Momordica charantia]1.3e-0943.68Show/hide
Query:  MIDVVRTTMDMQTTHMQRLLSWQKEKYELEVARRKEVVYLLCQIEGLTEHYRVSLIDMLVTDIQKTNCFLQVPPQSRSTYCMCLLGK
        M+DVVRT M MQT H++++ +W  +K E ++ARRK V   L QI  L  +  V L+ +L+T+++K+  FL+VP + +  +CM LLGK
Subjt:  MIDVVRTTMDMQTTHMQRLLSWQKEKYELEVARRKEVVYLLCQIEGLTEHYRVSLIDMLVTDIQKTNCFLQVPPQSRSTYCMCLLGK

XP_038877407.1 uncharacterized protein LOC120069696 [Benincasa hispida]6.9e-1957.47Show/hide
Query:  MIDVVRTTMDMQTTHMQRLLSWQKEKYELEVARRKEVVYLLCQIEGLTEHYRVSLIDMLVTDIQKTNCFLQVPPQSRSTYCMCLLGK
        MID++R+T++M +THM RL SWQK+KYELE  R+KEVV  +  I+GL E  +V+LID++VTDIQKT+CFL VP  +   YC+ LLG+
Subjt:  MIDVVRTTMDMQTTHMQRLLSWQKEKYELEVARRKEVVYLLCQIEGLTEHYRVSLIDMLVTDIQKTNCFLQVPPQSRSTYCMCLLGK

XP_038887234.1 uncharacterized protein LOC120077425 [Benincasa hispida]9.9e-1857.47Show/hide
Query:  MIDVVRTTMDMQTTHMQRLLSWQKEKYELEVARRKEVVYLLCQIEGLTEHYRVSLIDMLVTDIQKTNCFLQVPPQSRSTYCMCLLGK
        MID+V++T++MQ+THM RL SWQ EKYELE+   KEVV  +  I+ L E+ +V+LID++VTDIQKT+CFL VP  +R  YC+ LLG+
Subjt:  MIDVVRTTMDMQTTHMQRLLSWQKEKYELEVARRKEVVYLLCQIEGLTEHYRVSLIDMLVTDIQKTNCFLQVPPQSRSTYCMCLLGK

XP_038895773.1 uncharacterized protein LOC120083935 [Benincasa hispida]9.9e-1864.47Show/hide
Query:  QTTHMQRLLSWQKEKYELEVARRKEVVYLLCQIEGLTEHYRVSLIDMLVTDIQKTNCFLQVPPQSRSTYCMCLLGK
        ++THM RL SWQKEKYELE  RRKEVV  +  I+GL E  +V+LID+LVTDIQKTNCFL VP  +R  YC+ LLG+
Subjt:  QTTHMQRLLSWQKEKYELEVARRKEVVYLLCQIEGLTEHYRVSLIDMLVTDIQKTNCFLQVPPQSRSTYCMCLLGK

XP_038896380.1 uncharacterized protein LOC120084641 [Benincasa hispida]4.8e-2062.35Show/hide
Query:  MIDVVRTTMDMQTTHMQRLLSWQKEKYELEVARRKEVVYLLCQIEGLTEHYRVSLIDMLVTDIQKTNCFLQVPPQSRSTYCMCLL
        MID++R+T++MQ+THM RL SWQKEKYELE  RRKEVV  +  I+GL E  +V+ ID+LVTDIQKT+CFL VP  +R  YC+ LL
Subjt:  MIDVVRTTMDMQTTHMQRLLSWQKEKYELEVARRKEVVYLLCQIEGLTEHYRVSLIDMLVTDIQKTNCFLQVPPQSRSTYCMCLL

TrEMBL top hitse value%identityAlignment
A0A6J1DW73 uncharacterized protein LOC1110250186.3e-1043.68Show/hide
Query:  MIDVVRTTMDMQTTHMQRLLSWQKEKYELEVARRKEVVYLLCQIEGLTEHYRVSLIDMLVTDIQKTNCFLQVPPQSRSTYCMCLLGK
        M+DVVRT M MQT H++++ +W  +K E ++ARRK V   L QI  L  +  V L+ +L+T+++K+  FL+VP + +  +CM LLGK
Subjt:  MIDVVRTTMDMQTTHMQRLLSWQKEKYELEVARRKEVVYLLCQIEGLTEHYRVSLIDMLVTDIQKTNCFLQVPPQSRSTYCMCLLGK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGATGTTGTGCGGACAACAATGGACATGCAAACAACTCACATGCAAAGGCTTCTATCATGGCAGAAGGAGAAGTATGAGTTGGAGGTTGCACGACGGAAGGAAGT
GGTCTACCTGTTGTGCCAAATAGAAGGGTTGACCGAGCATTATCGTGTCTCCCTGATAGACATGCTTGTCACCGATATACAGAAGACAAACTGCTTCCTACAGGTCCCAC
CTCAATCGAGGAGTACGTACTGTATGTGTCTCCTGGGTAAGATTGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGATTGATGTTGTGCGGACAACAATGGACATGCAAACAACTCACATGCAAAGGCTTCTATCATGGCAGAAGGAGAAGTATGAGTTGGAGGTTGCACGACGGAAGGAAGT
GGTCTACCTGTTGTGCCAAATAGAAGGGTTGACCGAGCATTATCGTGTCTCCCTGATAGACATGCTTGTCACCGATATACAGAAGACAAACTGCTTCCTACAGGTCCCAC
CTCAATCGAGGAGTACGTACTGTATGTGTCTCCTGGGTAAGATTGGATGA
Protein sequenceShow/hide protein sequence
MIDVVRTTMDMQTTHMQRLLSWQKEKYELEVARRKEVVYLLCQIEGLTEHYRVSLIDMLVTDIQKTNCFLQVPPQSRSTYCMCLLGKIG