; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0002445 (gene) of Snake gourd v1 genome

Gene IDTan0002445
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionCCHC-type domain-containing protein
Genome locationLG04:11002209..11003573
RNA-Seq ExpressionTan0002445
SyntenyTan0002445
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283
IPR025836 - Zinc knuckle CX2CX4HX4C
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG48193.1 hypothetical protein EZV62_027487 [Acer yangbiense]4.8e-3634.36Show/hide
Query:  MEEKIFSKRLAGLNLQEEELGGVVEVDDDELEEFEKGNQDDAAC---KILTTKTINVEVVKNIVPRIWNLEGNIKIESAGRNMFLVSFTNKKEKDRIILG
        M E   ++    L+L++E+   V E+ +D +++   G++D   C   K+LT K +N E  K ++ +IWN  G +++E  G N F+  FTNK+ ++++   
Subjt:  MEEKIFSKRLAGLNLQEEELGGVVEVDDDELEEFEKGNQDDAAC---KILTTKTINVEVVKNIVPRIWNLEGNIKIESAGRNMFLVSFTNKKEKDRIILG

Query:  GPWSFDRGLIVFEEIRGALNLKAMDFRYAYFWTNFHDLPRVCFTRKKAEALENSIGRFEGVESDGAGKCNGQTLRVRVRIDVTRPLRRATKLKIGSMGEE
        GPW F + LIV E+ +G  ++  + F  A FW   HD+P +C  ++  + L   IG    + ++ + +C G+ +RV+V++D+T+PL+R  ++K+G   E 
Subjt:  GPWSFDRGLIVFEEIRGALNLKAMDFRYAYFWTNFHDLPRVCFTRKKAEALENSIGRFEGVESDGAGKCNGQTLRVRVRIDVTRPLRRATKLKIGSMGEE

Query:  IWVQISYEKLPDFCFGYGKIGHLVKDC
          V + YE+LPDFCF  G+IGH V++C
Subjt:  IWVQISYEKLPDFCFGYGKIGHLVKDC

XP_006485824.1 uncharacterized protein LOC102613298 [Citrus sinensis]6.2e-3638.25Show/hide
Query:  KILTTKTINVEVVKNIVPRIWNLEGNIKIESAGRNMFLVSFTNKKEKDRIILGGPWSFDRGLIVFEEIRGALNLKAMDFRYAYFWTNFHDLPRVCFTRKK
        KIL T+++  E ++  + + W      K+ES G N+FL  F +K EK RI+ GGPW FDR L+V  E  G  ++K  DF +A FW   H++P +C  ++ 
Subjt:  KILTTKTINVEVVKNIVPRIWNLEGNIKIESAGRNMFLVSFTNKKEKDRIILGGPWSFDRGLIVFEEIRGALNLKAMDFRYAYFWTNFHDLPRVCFTRKK

Query:  AEALENSIGRFEGVESDGAGKCNGQTLRVRVRIDVTRPLRRATKLKIGSMGEEIWVQISYEKLPDFCFGYGKIGHLVKDCDLGEGGIKNNLQFGGGEAAA
         + +   IG+ + VE+D AG+C G  +RVR+ ++VTRPL +   LK+   G +I ++I+YEKLPDFCF  G IGH  ++C   +G  K++L +G    A 
Subjt:  AEALENSIGRFEGVESDGAGKCNGQTLRVRVRIDVTRPLRRATKLKIGSMGEEIWVQISYEKLPDFCFGYGKIGHLVKDCDLGEGGIKNNLQFGGGEAAA

Query:  KSREERNIGSGRGRGRG
           E       +  G G
Subjt:  KSREERNIGSGRGRGRG

XP_024035600.1 uncharacterized protein LOC112096408 [Citrus clementina]2.8e-3638.25Show/hide
Query:  KILTTKTINVEVVKNIVPRIWNLEGNIKIESAGRNMFLVSFTNKKEKDRIILGGPWSFDRGLIVFEEIRGALNLKAMDFRYAYFWTNFHDLPRVCFTRKK
        KIL T+++  E ++  + + W      K+ES G N+FL  F ++ EK RI+ GGPW FDR L+V  E  G  ++K  DF +A FW   H++P +C  ++ 
Subjt:  KILTTKTINVEVVKNIVPRIWNLEGNIKIESAGRNMFLVSFTNKKEKDRIILGGPWSFDRGLIVFEEIRGALNLKAMDFRYAYFWTNFHDLPRVCFTRKK

Query:  AEALENSIGRFEGVESDGAGKCNGQTLRVRVRIDVTRPLRRATKLKIGSMGEEIWVQISYEKLPDFCFGYGKIGHLVKDCDLGEGGIKNNLQFGGGEAAA
         + +   IG+ + VE+D AG+C G  +RVR+ ++VTRPL +   LK+   G +I ++I+YEKLPDFCF  G IGH  ++C   +G  K++L +G    A 
Subjt:  AEALENSIGRFEGVESDGAGKCNGQTLRVRVRIDVTRPLRRATKLKIGSMGEEIWVQISYEKLPDFCFGYGKIGHLVKDCDLGEGGIKNNLQFGGGEAAA

Query:  KSREERNIGSGRGRGRG
           E       + RG G
Subjt:  KSREERNIGSGRGRGRG

XP_024041282.1 uncharacterized protein LOC112098886 [Citrus clementina]1.1e-3536.1Show/hide
Query:  MEEKIFSKRLAGLNLQEEELGGVVEVDDDELEEFEKGNQDDAAC---KILTTKTINVEVVKNIVPRIWNLEGNIKIESAGRNMFLVSFTNKKEKDRIILG
        M+ K   KR   + L +EE G V  +   +     K     A C   K+L T+ +N E +K  + R+W     +KIES G N+F+  F ++ +K  II G
Subjt:  MEEKIFSKRLAGLNLQEEELGGVVEVDDDELEEFEKGNQDDAAC---KILTTKTINVEVVKNIVPRIWNLEGNIKIESAGRNMFLVSFTNKKEKDRIILG

Query:  GPWSFDRGLIVFEEIRGALNLKAMDFRYAYFWTNFHDLPRVCFTRKKAEALENSIGRFEGVESDGAGKCNGQTLRVRVRIDVTRPLRRATKLKIGSMGEE
        GPW FDR L+V  E  G   +K  DFR+  FW   HD+P +C T++ A  L   +G+ E VE+D AG+  GQ LR+R+ +DVT+ L++    + G   E+
Subjt:  GPWSFDRGLIVFEEIRGALNLKAMDFRYAYFWTNFHDLPRVCFTRKKAEALENSIGRFEGVESDGAGKCNGQTLRVRVRIDVTRPLRRATKLKIGSMGEE

Query:  IWVQISYEKLPDFCFGYGKIGHLVKDCDLGEGGIKNNLQFG
        I +++ YE+L DFCF  G+I H  ++C   +   K+ + +G
Subjt:  IWVQISYEKLPDFCFGYGKIGHLVKDCDLGEGGIKNNLQFG

XP_024953751.1 uncharacterized protein LOC112498094 [Citrus sinensis]5.4e-4033.77Show/hide
Query:  MEEKIFSKRLAGLNLQEEELGGVVEVDDDELEEFEKGNQDDAAC---KILTTKTINVEVVKNIVPRIWNLEGNIKIESAGRNMFLVSFTNKKEKDRIILG
        ME +   +R   + L +EE G V      + +  +KG +  A C   K++ T+ +++E +K  + R+W     +KIES G N+F+  F ++ +K  I++G
Subjt:  MEEKIFSKRLAGLNLQEEELGGVVEVDDDELEEFEKGNQDDAAC---KILTTKTINVEVVKNIVPRIWNLEGNIKIESAGRNMFLVSFTNKKEKDRIILG

Query:  GPWSFDRGLIVFEEIRGALNLKAMDFRYAYFWTNFHDLPRVCFTRKKAEALENSIGRFEGVESDGAGKCNGQTLRVRVRIDVTRPLRRATKL-KIGSMGE
        GPW FDR LIV  E  G  ++K  DF +  FW   HD+P +C T++   AL  +IG+ E VE+D AG+C GQ LR+R+ +D+TRPL++  +L + G   E
Subjt:  GPWSFDRGLIVFEEIRGALNLKAMDFRYAYFWTNFHDLPRVCFTRKKAEALENSIGRFEGVESDGAGKCNGQTLRVRVRIDVTRPLRRATKL-KIGSMGE

Query:  EIWVQISYEKLPDFCFGYGKIGHLVKDCDLGEGGIKNNLQFGGGEAAAKSREERNIGSGRGR----------GRGLPLRKRAKPRGDEDKKDLADTPQYE
        +I +Q+ YE+LPDFCF  G+IGH  ++C   +   K+ L +G    A+   E      G+ R              P R R     +E +K+  D P  +
Subjt:  EIWVQISYEKLPDFCFGYGKIGHLVKDCDLGEGGIKNNLQFGGGEAAAKSREERNIGSGRGR----------GRGLPLRKRAKPRGDEDKKDLADTPQYE

Query:  QNKKK
        +   +
Subjt:  QNKKK

TrEMBL top hitse value%identityAlignment
A0A1S8AC25 CCHC-type domain-containing protein (Fragment)1.2e-3735.14Show/hide
Query:  MEEKIFSKRLAGLNLQEEELGGVVEVDDDELEEFEKGNQDDAACKILTTKTINVEVVKNIVPRIWNLEGNIKIESAGRNMFLVSFTNKKEKDRIILGGPW
        M+ +   KR   + L +EE GG V   +      EK        K+L T+ +++E +K  + R+W     +KIE  G N+F+  F ++ +K  I++GGPW
Subjt:  MEEKIFSKRLAGLNLQEEELGGVVEVDDDELEEFEKGNQDDAACKILTTKTINVEVVKNIVPRIWNLEGNIKIESAGRNMFLVSFTNKKEKDRIILGGPW

Query:  SFDRGLIVFEEIRGALNLKAMDFRYAYFWTNFHDLPRVCFTRKKAEALENSIGRFEGVESDGAGKCNGQTLRVRVRIDVTRPLRRATKLKIGSM-GEEIW
         FDR LI   E  G  ++K  DF +  FW   HD+P +C ++  A  L   IG+ E VE+D AG+C GQ LR+R+ +D+T+PL++  +L+      ++I 
Subjt:  SFDRGLIVFEEIRGALNLKAMDFRYAYFWTNFHDLPRVCFTRKKAEALENSIGRFEGVESDGAGKCNGQTLRVRVRIDVTRPLRRATKLKIGSM-GEEIW

Query:  VQISYEKLPDFCFGYGKIGHLVKDCDLGEGGIKNNLQFGGGEAAAKSREERNIGSGRGR
        +++ YE+LPDFCF  G+IGH  ++C   +   K+ L +G    A    E+   G GR R
Subjt:  VQISYEKLPDFCFGYGKIGHLVKDCDLGEGGIKNNLQFGGGEAAAKSREERNIGSGRGR

A0A5C7GU64 CCHC-type domain-containing protein2.3e-3634.36Show/hide
Query:  MEEKIFSKRLAGLNLQEEELGGVVEVDDDELEEFEKGNQDDAAC---KILTTKTINVEVVKNIVPRIWNLEGNIKIESAGRNMFLVSFTNKKEKDRIILG
        M E   ++    L+L++E+   V E+ +D +++   G++D   C   K+LT K +N E  K ++ +IWN  G +++E  G N F+  FTNK+ ++++   
Subjt:  MEEKIFSKRLAGLNLQEEELGGVVEVDDDELEEFEKGNQDDAAC---KILTTKTINVEVVKNIVPRIWNLEGNIKIESAGRNMFLVSFTNKKEKDRIILG

Query:  GPWSFDRGLIVFEEIRGALNLKAMDFRYAYFWTNFHDLPRVCFTRKKAEALENSIGRFEGVESDGAGKCNGQTLRVRVRIDVTRPLRRATKLKIGSMGEE
        GPW F + LIV E+ +G  ++  + F  A FW   HD+P +C  ++  + L   IG    + ++ + +C G+ +RV+V++D+T+PL+R  ++K+G   E 
Subjt:  GPWSFDRGLIVFEEIRGALNLKAMDFRYAYFWTNFHDLPRVCFTRKKAEALENSIGRFEGVESDGAGKCNGQTLRVRVRIDVTRPLRRATKLKIGSMGEE

Query:  IWVQISYEKLPDFCFGYGKIGHLVKDC
          V + YE+LPDFCF  G+IGH V++C
Subjt:  IWVQISYEKLPDFCFGYGKIGHLVKDC

A0A5C7GZQ4 CCHC-type domain-containing protein2.2e-3438.81Show/hide
Query:  ACKILTTKTINVEVVKNIVPRIWNLEGNIKIESAGRNMFLVSFTNKKEKDR--IILGGPWSFDRGLIVFEEIRGALNLKAMDFRYAYFWTNFHDLPRVCF
        A K+L+ K +N E   +++PRIW      +IE    N+F  SFT K+E DR  ++ GGPWSFD+ L+V EE  G  +++ M F    FW   H +P +C 
Subjt:  ACKILTTKTINVEVVKNIVPRIWNLEGNIKIESAGRNMFLVSFTNKKEKDR--IILGGPWSFDRGLIVFEEIRGALNLKAMDFRYAYFWTNFHDLPRVCF

Query:  TRKKAEALENSIGRFEGVESDGAGKCNGQTLRVRVRIDVTRPLRRATKLKIGSMGEEIWVQISYEKLPDFCFGYGKIGHLVKDCDLGEGGIK---NNLQF
        T +    L + IG  + ++  G+G C G+ +RVRV +DVT+PLRR  ++ +   G+E  + + YE+LPD C+  G+IGH+V+DC +    ++    NL F
Subjt:  TRKKAEALENSIGRFEGVESDGAGKCNGQTLRVRVRIDVTRPLRRATKLKIGSMGEEIWVQISYEKLPDFCFGYGKIGHLVKDCDLGEGGIK---NNLQF

Query:  G
        G
Subjt:  G

A0A5C7H9Y2 CCHC-type domain-containing protein1.7e-3433.33Show/hide
Query:  MEEKIFSKRLAGLNLQEEELGGVVEVDDDELEEFEKGNQDDAACKILTTKTINVEVVKNIVPRIWNLEGNIKIESAGRNMFLVSFTNKKEKDRIILGGPW
        ME    S++   L+L ++  G +  +     E  E+        K +T K IN E  K+ +  IW  +  + +E  G N+F   F N  ++ RI+ GGPW
Subjt:  MEEKIFSKRLAGLNLQEEELGGVVEVDDDELEEFEKGNQDDAACKILTTKTINVEVVKNIVPRIWNLEGNIKIESAGRNMFLVSFTNKKEKDRIILGGPW

Query:  SFDRGLIVFEEIRGALNLKAMDFRYAYFWTNFHDLPRVCFTRKKAEALENSIGRFEGVESDGAGKCNGQTLRVRVRIDVTRPLRRATKLKIGSMGEEIWV
         FD+ L+V  E  G+  +  + FRY  FW   H+LP  C  R+    L   +G+ + +++  +G+C GQ +R+RV IDV  PL+R  ++ +G   +   V
Subjt:  SFDRGLIVFEEIRGALNLKAMDFRYAYFWTNFHDLPRVCFTRKKAEALENSIGRFEGVESDGAGKCNGQTLRVRVRIDVTRPLRRATKLKIGSMGEEIWV

Query:  QISYEKLPDFCFGYGKIGHLVKDCDLGEGGIKNNLQFGGGEAAAKSREERNIGSG
         I YE+LP+FC+  GKIGHLV+DC L    I ++  F  G         R+ G+G
Subjt:  QISYEKLPDFCFGYGKIGHLVKDCDLGEGGIKNNLQFGGGEAAAKSREERNIGSG

A0A5C7IU01 CCHC-type domain-containing protein1.5e-3536.82Show/hide
Query:  KRLAGLNLQEEELGGVVEVDDDELEEFEKGNQDDAAC---KILTTKTINVEVVKNIVPRIWNLEGNIKIESAGRNMFLVSFTNKKEKDRIILGGPWSFDR
        K    ++L +E+ G V+E+ ++ + +   G +D   C   K+LT K IN E  K ++ +IW+  G +++E  G N+F+  F N+ ++DR+   GPW F  
Subjt:  KRLAGLNLQEEELGGVVEVDDDELEEFEKGNQDDAAC---KILTTKTINVEVVKNIVPRIWNLEGNIKIESAGRNMFLVSFTNKKEKDRIILGGPWSFDR

Query:  GLIVFEEIRGALNLKAMDFRYAYFWTNFHDLPRVCFTRKKAEALENSIGRFEGVESDGAGKCNGQTLRVRVRIDVTRPLRRATKLKIGSMGEEIWVQISY
         LI  E+  G  N+  ++F  A FW   HD+P +C  R+ A  L   IG    + S+ + +C G  LRV+VRID+++PL+R  +LK+G+  E I V + Y
Subjt:  GLIVFEEIRGALNLKAMDFRYAYFWTNFHDLPRVCFTRKKAEALENSIGRFEGVESDGAGKCNGQTLRVRVRIDVTRPLRRATKLKIGSMGEEIWVQISY

Query:  EKLPDFCFGYGKIGHLVKDC
        E+LP+FC+  G+IGH +K+C
Subjt:  EKLPDFCFGYGKIGHLVKDC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAAAAGATATTTAGCAAACGGCTAGCGGGTTTAAACCTACAAGAGGAGGAATTGGGAGGAGTGGTCGAGGTCGATGACGATGAGCTCGAAGAATTTGAGAAAGG
GAATCAAGACGACGCTGCCTGCAAAATACTCACAACAAAAACCATAAATGTTGAAGTTGTTAAAAACATTGTTCCGAGAATATGGAATCTGGAGGGAAACATCAAGATAG
AATCGGCAGGAAGAAATATGTTCCTAGTCTCGTTCACGAACAAGAAAGAAAAAGACAGAATCATCCTTGGAGGACCTTGGAGTTTCGATAGGGGTCTGATTGTGTTCGAA
GAAATCAGGGGAGCTCTGAACCTAAAAGCAATGGACTTCAGGTATGCATACTTTTGGACTAACTTTCATGATCTTCCTAGAGTATGTTTCACCAGGAAAAAAGCTGAAGC
CTTGGAGAATTCCATCGGTAGATTTGAAGGCGTGGAATCGGATGGGGCAGGGAAATGTAACGGACAAACTCTTAGAGTGAGAGTGAGGATAGATGTAACCCGACCCCTGA
GAAGAGCTACTAAGCTAAAGATCGGCTCAATGGGAGAAGAGATCTGGGTTCAAATAAGCTACGAGAAGCTTCCTGATTTCTGCTTTGGTTATGGTAAAATTGGGCACTTA
GTAAAGGACTGCGACCTTGGAGAAGGAGGAATAAAGAATAACCTGCAGTTTGGGGGAGGGGAAGCGGCAGCAAAATCCAGAGAAGAGAGAAATATAGGCAGTGGGAGGGG
TCGAGGAAGAGGGCTTCCTCTACGCAAAAGAGCGAAACCAAGGGGAGATGAAGACAAAAAGGATCTCGCGGATACTCCCCAGTACGAACAGAACAAGAAGAAAGAAGGGA
TGATAGGGCAAAGTTTGGGGCAAGAAGATGAGAATGAACCGGACCCTGCGGCCGGAGAAGGCGTCGGTGAACGGAAAAATGCCTCAACGGACATTCTCGTTCAGAGTGAT
GAGTCGTTGGATGTGATGGGTCAGGATAACGTGGGTGCAAGAGCCCCACGTGGGCTTGAGTTAACCCCCTCTGGTGATGGTGGGACCCAGCCTGCAGAAAGAGACACGAC
GAAAAAAGGAATTCCCGAGGGCGGATTAGTGCACTACAACGGGCTGGGGCGTGATCTAGAAGTGGATGGGCTGAATTTTGGGCCAGGAGAAAGGGGCCAAAACTCGACGG
ATGAGGCCTTAAAGGATGAGATCAACCGAGAGGCTTTTTTAATGGGCTCTTCTGTGATATCTGCTGAAAAGAGGCAAAACCCTCTACCGACAAAAGGGATTATTTCTGGG
ATAGCACTGGGACTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGAAAAGATATTTAGCAAACGGCTAGCGGGTTTAAACCTACAAGAGGAGGAATTGGGAGGAGTGGTCGAGGTCGATGACGATGAGCTCGAAGAATTTGAGAAAGG
GAATCAAGACGACGCTGCCTGCAAAATACTCACAACAAAAACCATAAATGTTGAAGTTGTTAAAAACATTGTTCCGAGAATATGGAATCTGGAGGGAAACATCAAGATAG
AATCGGCAGGAAGAAATATGTTCCTAGTCTCGTTCACGAACAAGAAAGAAAAAGACAGAATCATCCTTGGAGGACCTTGGAGTTTCGATAGGGGTCTGATTGTGTTCGAA
GAAATCAGGGGAGCTCTGAACCTAAAAGCAATGGACTTCAGGTATGCATACTTTTGGACTAACTTTCATGATCTTCCTAGAGTATGTTTCACCAGGAAAAAAGCTGAAGC
CTTGGAGAATTCCATCGGTAGATTTGAAGGCGTGGAATCGGATGGGGCAGGGAAATGTAACGGACAAACTCTTAGAGTGAGAGTGAGGATAGATGTAACCCGACCCCTGA
GAAGAGCTACTAAGCTAAAGATCGGCTCAATGGGAGAAGAGATCTGGGTTCAAATAAGCTACGAGAAGCTTCCTGATTTCTGCTTTGGTTATGGTAAAATTGGGCACTTA
GTAAAGGACTGCGACCTTGGAGAAGGAGGAATAAAGAATAACCTGCAGTTTGGGGGAGGGGAAGCGGCAGCAAAATCCAGAGAAGAGAGAAATATAGGCAGTGGGAGGGG
TCGAGGAAGAGGGCTTCCTCTACGCAAAAGAGCGAAACCAAGGGGAGATGAAGACAAAAAGGATCTCGCGGATACTCCCCAGTACGAACAGAACAAGAAGAAAGAAGGGA
TGATAGGGCAAAGTTTGGGGCAAGAAGATGAGAATGAACCGGACCCTGCGGCCGGAGAAGGCGTCGGTGAACGGAAAAATGCCTCAACGGACATTCTCGTTCAGAGTGAT
GAGTCGTTGGATGTGATGGGTCAGGATAACGTGGGTGCAAGAGCCCCACGTGGGCTTGAGTTAACCCCCTCTGGTGATGGTGGGACCCAGCCTGCAGAAAGAGACACGAC
GAAAAAAGGAATTCCCGAGGGCGGATTAGTGCACTACAACGGGCTGGGGCGTGATCTAGAAGTGGATGGGCTGAATTTTGGGCCAGGAGAAAGGGGCCAAAACTCGACGG
ATGAGGCCTTAAAGGATGAGATCAACCGAGAGGCTTTTTTAATGGGCTCTTCTGTGATATCTGCTGAAAAGAGGCAAAACCCTCTACCGACAAAAGGGATTATTTCTGGG
ATAGCACTGGGACTATGA
Protein sequenceShow/hide protein sequence
MEEKIFSKRLAGLNLQEEELGGVVEVDDDELEEFEKGNQDDAACKILTTKTINVEVVKNIVPRIWNLEGNIKIESAGRNMFLVSFTNKKEKDRIILGGPWSFDRGLIVFE
EIRGALNLKAMDFRYAYFWTNFHDLPRVCFTRKKAEALENSIGRFEGVESDGAGKCNGQTLRVRVRIDVTRPLRRATKLKIGSMGEEIWVQISYEKLPDFCFGYGKIGHL
VKDCDLGEGGIKNNLQFGGGEAAAKSREERNIGSGRGRGRGLPLRKRAKPRGDEDKKDLADTPQYEQNKKKEGMIGQSLGQEDENEPDPAAGEGVGERKNASTDILVQSD
ESLDVMGQDNVGARAPRGLELTPSGDGGTQPAERDTTKKGIPEGGLVHYNGLGRDLEVDGLNFGPGERGQNSTDEALKDEINREAFLMGSSVISAEKRQNPLPTKGIISG
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