; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0002465 (gene) of Snake gourd v1 genome

Gene IDTan0002465
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionsignal recognition particle 19 kDa protein
Genome locationLG10:10766734..10775893
RNA-Seq ExpressionTan0002465
SyntenyTan0002465
Gene Ontology termsGO:0006614 - SRP-dependent cotranslational protein targeting to membrane (biological process)
GO:0005786 - signal recognition particle, endoplasmic reticulum targeting (cellular component)
GO:0004386 - helicase activity (molecular function)
GO:0008312 - 7S RNA binding (molecular function)
InterPro domainsIPR002778 - Signal recognition particle, SRP19 subunit
IPR036521 - Signal recognition particle, subunit SRP19-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN54616.2 hypothetical protein Csa_018066 [Cucumis sativus]3.9e-6696.32Show/hide
Query:  MDGEIPNIKRWVILYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI
        MDGEIPNIKRWV+LYPIYINSKKTIAEGRRIGVSKACENPTC EIGDCC HLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI
Subjt:  MDGEIPNIKRWVILYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI

Query:  AELVPRHPGRTKKQEPASSSSTAGTSKSGKGGRKKK
        AELVPRHPGRTKKQEPASSSSTAG SK GKGGRKKK
Subjt:  AELVPRHPGRTKKQEPASSSSTAGTSKSGKGGRKKK

XP_004147903.1 signal recognition particle 19 kDa protein [Cucumis sativus]3.9e-6696.32Show/hide
Query:  MDGEIPNIKRWVILYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI
        MDGEIPNIKRWV+LYPIYINSKKTIAEGRRIGVSKACENPTC EIGDCC HLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI
Subjt:  MDGEIPNIKRWVILYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI

Query:  AELVPRHPGRTKKQEPASSSSTAGTSKSGKGGRKKK
        AELVPRHPGRTKKQEPASSSSTAG SK GKGGRKKK
Subjt:  AELVPRHPGRTKKQEPASSSSTAGTSKSGKGGRKKK

XP_008438988.1 PREDICTED: signal recognition particle 19 kDa protein [Cucumis melo]2.2e-6495.59Show/hide
Query:  MDGEIPNIKRWVILYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI
        MDGEIPNIKRWV+LYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRV LKKEDGTLSNPAITSRKQLMLR+
Subjt:  MDGEIPNIKRWVILYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI

Query:  AELVPRHPGRTKKQEPASSSSTAGTSKSGKGGRKKK
        AELVPRHPGRTKKQEPA SSSTAG SK GKGGRKKK
Subjt:  AELVPRHPGRTKKQEPASSSSTAGTSKSGKGGRKKK

XP_022138272.1 signal recognition particle 19 kDa protein [Momordica charantia]1.4e-6696.32Show/hide
Query:  MDGEIPNIKRWVILYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI
        MDGE+PNIKRWV+LYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQ+MLRI
Subjt:  MDGEIPNIKRWVILYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI

Query:  AELVPRHPGRTKKQEPASSSSTAGTSKSGKGGRKKK
        AELVPRHPGRTKKQEPA SSSTAG SKSGKGGRKKK
Subjt:  AELVPRHPGRTKKQEPASSSSTAGTSKSGKGGRKKK

XP_038879562.1 signal recognition particle 19 kDa protein [Benincasa hispida]3.3e-6597.06Show/hide
Query:  MDGEIPNIKRWVILYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI
        MDGEIPNIKRWV+LYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI
Subjt:  MDGEIPNIKRWVILYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI

Query:  AELVPRHPGRTKKQEPASSSSTAGTSKSGKGGRKKK
        AELVPRHPGRTKKQEPA SSSTAG SK GKGGRKKK
Subjt:  AELVPRHPGRTKKQEPASSSSTAGTSKSGKGGRKKK

TrEMBL top hitse value%identityAlignment
A0A0A0L5F9 Uncharacterized protein3.0e-6495.59Show/hide
Query:  MDGEIPNIKRWVILYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI
        MDGEIPNIKRWV+LYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRV LKKEDG LSNPAITSRKQLMLRI
Subjt:  MDGEIPNIKRWVILYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI

Query:  AELVPRHPGRTKKQEPASSSSTAGTSKSGKGGRKKK
        AELVPRHPGRTKKQEPA SSSTAG SK GKGGRKKK
Subjt:  AELVPRHPGRTKKQEPASSSSTAGTSKSGKGGRKKK

A0A1S3AYC2 signal recognition particle 19 kDa protein1.0e-6495.59Show/hide
Query:  MDGEIPNIKRWVILYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI
        MDGEIPNIKRWV+LYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRV LKKEDGTLSNPAITSRKQLMLR+
Subjt:  MDGEIPNIKRWVILYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI

Query:  AELVPRHPGRTKKQEPASSSSTAGTSKSGKGGRKKK
        AELVPRHPGRTKKQEPA SSSTAG SK GKGGRKKK
Subjt:  AELVPRHPGRTKKQEPASSSSTAGTSKSGKGGRKKK

A0A6J1CAM2 signal recognition particle 19 kDa protein6.5e-6796.32Show/hide
Query:  MDGEIPNIKRWVILYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI
        MDGE+PNIKRWV+LYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQ+MLRI
Subjt:  MDGEIPNIKRWVILYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI

Query:  AELVPRHPGRTKKQEPASSSSTAGTSKSGKGGRKKK
        AELVPRHPGRTKKQEPA SSSTAG SKSGKGGRKKK
Subjt:  AELVPRHPGRTKKQEPASSSSTAGTSKSGKGGRKKK

A0A6J1GUF8 signal recognition particle 19 kDa protein5.2e-6494.85Show/hide
Query:  MDGEIPNIKRWVILYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI
        MDGEIPNIKRWV+LYP+YINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAI SRKQLMLRI
Subjt:  MDGEIPNIKRWVILYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI

Query:  AELVPRHPGRTKKQEPASSSSTAGTSKSGKGGRKKK
        AELVPRHPGR KKQEPA SSSTAG SK GKGGRKKK
Subjt:  AELVPRHPGRTKKQEPASSSSTAGTSKSGKGGRKKK

A0A6J1IY39 signal recognition particle 19 kDa protein4.0e-6495.59Show/hide
Query:  MDGEIPNIKRWVILYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI
        MDGEIPNIKRWV+LYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAI SRKQLMLRI
Subjt:  MDGEIPNIKRWVILYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI

Query:  AELVPRHPGRTKKQEPASSSSTAGTSKSGKGGRKKK
        AELVPRHPGR KKQEPA SSSTAG SK GKGGRKKK
Subjt:  AELVPRHPGRTKKQEPASSSSTAGTSKSGKGGRKKK

SwissProt top hitse value%identityAlignment
P09132 Signal recognition particle 19 kDa protein2.5e-2350.38Show/hide
Query:  RWVILYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYP----RDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRIAELVP
        R++ +YP Y+N+KKTIAEGRRI +SKA ENPT  EI D CS + L   +E +K Y     RD   RGRVRV LK+EDG+L      SRK +ML  AE++P
Subjt:  RWVILYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYP----RDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRIAELVP

Query:  RHPGRTKKQEPASSSSTAGT-SKSGKGGRKK
        +   RT+K   A  S   G  SK GKG +KK
Subjt:  RHPGRTKKQEPASSSSTAGT-SKSGKGGRKK

P49964 Signal recognition particle 19 kDa protein5.0e-4872.31Show/hide
Query:  NIKRWVILYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRIAELVPR
        +IK+W ++YP+Y+NSKKT+AEGRRI   KAC +PTC EI DCCSHLK+P AIE+DKAYPRDF Q GRVRV LKK+DG+  NPAI ++KQLM++IAELVP+
Subjt:  NIKRWVILYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRIAELVPR

Query:  HPGRTKKQEPASSSSTAGTSKSGKGGRKKK
        H GRTKKQEPA +SSTAGTSK GKGG+KKK
Subjt:  HPGRTKKQEPASSSSTAGTSKSGKGGRKKK

Q5RBR1 Signal recognition particle 19 kDa protein2.5e-2350.38Show/hide
Query:  RWVILYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYP----RDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRIAELVP
        R++ +YP Y+N+KKTIAEGRRI +SKA ENPT  EI D CS + L   +E +K Y     RD   RGRVRV LK+EDG+L      SRK +ML  AE++P
Subjt:  RWVILYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYP----RDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRIAELVP

Query:  RHPGRTKKQEPASSSSTAGT-SKSGKGGRKK
        +   RT+K   A  S   G  SK GKG +KK
Subjt:  RHPGRTKKQEPASSSSTAGT-SKSGKGGRKK

Q943Z6 Signal recognition particle 19 kDa protein9.8e-5271.03Show/hide
Query:  MDGEIPNIKRWVILYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI
        MD    NIK+WV++YP+YINSKKT+AEGRRI VSK+CENP C EI DCC HLKLP A+EIDKAYPRDFMQ GRVRV LK+EDGTL NPAITSRK LM +I
Subjt:  MDGEIPNIKRWVILYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI

Query:  AELVPRHPGR--------TKKQEPASSSSTAGT-SKSGKGGRKKK
        AELVPRHP R         KKQEP +++ST+GT SKSGKGG+KK+
Subjt:  AELVPRHPGR--------TKKQEPASSSSTAGT-SKSGKGGRKKK

Q9D7A6 Signal recognition particle 19 kDa protein7.3e-2349.62Show/hide
Query:  RWVILYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYP----RDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRIAELVP
        R++ +YP Y+N+KKTIAEGRRI +SKA ENPT  EI D CS + L   +E +K Y     RD   RGRVRV LK+EDG+L      SRK +ML +AE++P
Subjt:  RWVILYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYP----RDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRIAELVP

Query:  RHPGRTKKQEPASSSSTAGT-SKSGKGGRKK
        +   RT+K   A      G  SK GKG +KK
Subjt:  RHPGRTKKQEPASSSSTAGT-SKSGKGGRKK

Arabidopsis top hitse value%identityAlignment
AT1G48160.1 signal recognition particle 19 kDa protein, putative / SRP19, putative6.9e-5371.03Show/hide
Query:  MDGEIPNIKRWVILYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI
        MD    NIK+WV++YP+YINSKKT+AEGRRI VSK+CENP C EI DCC HLKLP A+EIDKAYPRDFMQ GRVRV LK+EDGTL NPAITSRK LM +I
Subjt:  MDGEIPNIKRWVILYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI

Query:  AELVPRHPGR--------TKKQEPASSSSTAGT-SKSGKGGRKKK
        AELVPRHP R         KKQEP +++ST+GT SKSGKGG+KK+
Subjt:  AELVPRHPGR--------TKKQEPASSSSTAGT-SKSGKGGRKKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGGAGAAATTCCCAACATAAAAAGATGGGTAATATTGTATCCCATCTATATTAATTCAAAGAAGACAATAGCTGAAGGAAGACGTATAGGTGTTAGCAAAGCATG
TGAGAATCCTACGTGTGCAGAGATTGGGGATTGTTGCAGTCATCTCAAACTGCCCTTTGCAATTGAGATTGATAAGGCTTATCCTCGTGATTTCATGCAAAGAGGGAGAG
TGCGCGTTCTGCTGAAAAAGGAGGATGGAACTCTGTCTAATCCAGCTATTACTTCAAGAAAACAACTGATGCTTCGCATAGCCGAACTTGTTCCTAGACATCCTGGGAGG
ACAAAGAAACAGGAGCCTGCATCATCATCATCAACAGCAGGAACTTCAAAATCTGGCAAGGGTGGAAGAAAGAAGAAATAA
mRNA sequenceShow/hide mRNA sequence
CTTGTAGCTTCGGCGTCGCCCCATTTTCCGAGTTCTCTCATTTTTCGTCGCTCAATCTCGTCCATTGTCGCGGTTCGGCCGGATCAGAAAATCGGATCTCTGTTCAGCTT
CTCAATTTTGCATTCGAAGTCAGCTGAATTTTGGTTTATTAGGTCAATCTATGAGCACAAATTGATTATGTGAGGCGCCTCACCCCTTGTGTCACGGACCCTTCCGACTT
AAGGGTGTGACACCTTGCCATACGCAAGCAACTGCCTTAACTATATGAATTTAGACTCAATATTCTTGATATTTAAGGTCCAAAACTGAAATTCTTGCACAAGTTTATAT
TCATAATGACCCATTTATGTAACCCCCCAACAATTTTAGGAGTCCAAATATTTAATCCTTACCTATGATAGTGGGCTGATAGAGTTCATAAGGAGCTTTGAAGAGGAGAA
CAAGGAATTTGGTTAGAACATGGATGGAGAAATTCCCAACATAAAAAGATGGGTAATATTGTATCCCATCTATATTAATTCAAAGAAGACAATAGCTGAAGGAAGACGTA
TAGGTGTTAGCAAAGCATGTGAGAATCCTACGTGTGCAGAGATTGGGGATTGTTGCAGTCATCTCAAACTGCCCTTTGCAATTGAGATTGATAAGGCTTATCCTCGTGAT
TTCATGCAAAGAGGGAGAGTGCGCGTTCTGCTGAAAAAGGAGGATGGAACTCTGTCTAATCCAGCTATTACTTCAAGAAAACAACTGATGCTTCGCATAGCCGAACTTGT
TCCTAGACATCCTGGGAGGACAAAGAAACAGGAGCCTGCATCATCATCATCAACAGCAGGAACTTCAAAATCTGGCAAGGGTGGAAGAAAGAAGAAATAAATGCTTTTTT
GTAATTGCAAGAACCAGATTGTTATCAACCAGGCAAGCAGCTTCTTCTTCTTCTTTTTAGGTCTAAATTTCTATTAAATTCTTAACGATCTTTGAACCAGATTGTTCTGG
CCCGGCCCCCATCCAAAATGAGAACTACCACACAATGGGTTTGTTTTGAACAATTAATTTTGTAAAAAAAACAGTGGATCATGGAGTTTTACTGAGATAAAAGTTGCTGA
TAAATGAATTATTTAAGTTTAATGATTCACTCTTAAGCTTAAATAACCTCTGAATGTTATTTAGAGATTAAACATTGTGAAAATTTCTCAATCATTTGCCAGGATCTGAA
TCTGGAAG
Protein sequenceShow/hide protein sequence
MDGEIPNIKRWVILYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRIAELVPRHPGR
TKKQEPASSSSTAGTSKSGKGGRKKK