CuGenDBv2

Gene ID	Tan0002489
Organism	Trichosanthes anguina (Snake gourd v1)
Description	60S ribosomal protein L7a
Genome location	LG01:51094593..51099819
RNA-Seq Expression	Tan0002489
Synteny	Tan0002489
Gene Ontology terms	GO:0000470 - maturation of LSU-rRNA (biological process) GO:0022625 - cytosolic large ribosomal subunit (cellular component) GO:0003723 - RNA binding (molecular function)
InterPro domains	IPR004038 - Ribosomal protein L7Ae/L30e/S12e/Gadd45 IPR018492 - Ribosomal protein L7Ae/L8/Nhp2 family IPR029064 - 50S ribosomal protein L30e-like

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6579662.1 60S ribosomal protein L7a-2, partial [Cucurbita argyrosperma subsp. sororia]

1.2e-32

68.22

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Query:  MLLKYGPKDKTQKR-----------ESKSHDAKKLIVVKYGLNHVTYLIEHNKAQLVVIAHDVDPIELVVWLHALCRKMEIPYCI---------IVHKKI
        MLLKY P+DK QKR           E KSHDAKK IVVKYGLNHVTYLIE NKAQLVVIAHDVDPIELVVWL ALCRKMEIPYCI         IVHKK 
Subjt:  MLLKYGPKDKTQKR-----------ESKSHDAKKLIVVKYGLNHVTYLIEHNKAQLVVIAHDVDPIELVVWLHALCRKMEIPYCI---------IVHKKI

Query:  VIRFVLDKPHLNEDKMEFSKILEAIKLQF
             L     NEDKMEFS+ILEAIK  F
Subjt:  VIRFVLDKPHLNEDKMEFSKILEAIKLQF

KAG7017114.1 60S ribosomal protein L7a-2, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.2e-32

68.22

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Query:  MLLKYGPKDKTQKR-----------ESKSHDAKKLIVVKYGLNHVTYLIEHNKAQLVVIAHDVDPIELVVWLHALCRKMEIPYCI---------IVHKKI
        MLLKY P+DK QKR           E KSHDAKK IVVKYGLNHVTYLIE NKAQLVVIAHDVDPIELVVWL ALCRKMEIPYCI         IVHKK 
Subjt:  MLLKYGPKDKTQKR-----------ESKSHDAKKLIVVKYGLNHVTYLIEHNKAQLVVIAHDVDPIELVVWLHALCRKMEIPYCI---------IVHKKI

Query:  VIRFVLDKPHLNEDKMEFSKILEAIKLQF
             L     NEDKMEFS+ILEAIK  F
Subjt:  VIRFVLDKPHLNEDKMEFSKILEAIKLQF

XP_008467259.1 PREDICTED: 60S ribosomal protein L7a-2 [Cucumis melo]

4.1e-33

68.22

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Query:  MLLKYGPKDKTQKR-----------ESKSHDAKKLIVVKYGLNHVTYLIEHNKAQLVVIAHDVDPIELVVWLHALCRKMEIPYCI---------IVHKKI
        MLLKY P+DKTQKR           E KSHDAKK IVVKYGLNHVTYLIE NKAQLVVIAHDVDPIELVVWL ALCRKMEIPYCI         +VHKK 
Subjt:  MLLKYGPKDKTQKR-----------ESKSHDAKKLIVVKYGLNHVTYLIEHNKAQLVVIAHDVDPIELVVWLHALCRKMEIPYCI---------IVHKKI

Query:  VIRFVLDKPHLNEDKMEFSKILEAIKLQF
             L     NEDKMEFS+ILEAIK  F
Subjt:  VIRFVLDKPHLNEDKMEFSKILEAIKLQF

XP_023551212.1 60S ribosomal protein L7a-2-like [Cucurbita pepo subsp. pepo]

9.2e-33

68.22

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Query:  MLLKYGPKDKTQKR-----------ESKSHDAKKLIVVKYGLNHVTYLIEHNKAQLVVIAHDVDPIELVVWLHALCRKMEIPYCI---------IVHKKI
        MLLKY P+DK QKR           E KSHDAKK IVVKYGLNHVTYLIE NKAQLVVIAHDVDPIELVVWL ALCRKMEIPYCI         IVHKK 
Subjt:  MLLKYGPKDKTQKR-----------ESKSHDAKKLIVVKYGLNHVTYLIEHNKAQLVVIAHDVDPIELVVWLHALCRKMEIPYCI---------IVHKKI

Query:  VIRFVLDKPHLNEDKMEFSKILEAIKLQF
             L     NEDKMEFS+ILEAIK  F
Subjt:  VIRFVLDKPHLNEDKMEFSKILEAIKLQF

XP_038876464.1 60S ribosomal protein L7a-2-like isoform X2 [Benincasa hispida]

7.0e-33

68.22

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Query:  MLLKYGPKDKTQKR-----------ESKSHDAKKLIVVKYGLNHVTYLIEHNKAQLVVIAHDVDPIELVVWLHALCRKMEIPYCI---------IVHKKI
        MLLKY P+DKTQKR           E K+HDAKK IVVKYGLNHVTYLIE NKAQLVVIAHDVDPIELVVWL ALCRKMEIPYCI         IVHKK 
Subjt:  MLLKYGPKDKTQKR-----------ESKSHDAKKLIVVKYGLNHVTYLIEHNKAQLVVIAHDVDPIELVVWLHALCRKMEIPYCI---------IVHKKI

Query:  VIRFVLDKPHLNEDKMEFSKILEAIKLQF
             L     NEDKMEFS+ILEAIK  F
Subjt:  VIRFVLDKPHLNEDKMEFSKILEAIKLQF

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KPQ6 60S ribosomal protein L7a

1.3e-32

66.67

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Query:  MLLKYGPKDKTQKR-----------ESKSHDAKKLIVVKYGLNHVTYLIEHNKAQLVVIAHDVDPIELVVWLHALCRKMEIPYCI---------IVHKKI
        MLLKY P+DKTQK+           E KSHDAKK IVVKYGLNHVTYLIE NKAQLVVIAHDVDPIELVVWL ALCRKMEIPYCI         +VH+K 
Subjt:  MLLKYGPKDKTQKR-----------ESKSHDAKKLIVVKYGLNHVTYLIEHNKAQLVVIAHDVDPIELVVWLHALCRKMEIPYCI---------IVHKKI

Query:  VIRFVLDKPHLNEDKMEFSKILEAIKLQF
             L     NEDKMEFS+ILEAIK  F
Subjt:  VIRFVLDKPHLNEDKMEFSKILEAIKLQF

A0A1S3CUE8 60S ribosomal protein L7a

2.0e-33

68.22

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Query:  MLLKYGPKDKTQKR-----------ESKSHDAKKLIVVKYGLNHVTYLIEHNKAQLVVIAHDVDPIELVVWLHALCRKMEIPYCI---------IVHKKI
        MLLKY P+DKTQKR           E KSHDAKK IVVKYGLNHVTYLIE NKAQLVVIAHDVDPIELVVWL ALCRKMEIPYCI         +VHKK 
Subjt:  MLLKYGPKDKTQKR-----------ESKSHDAKKLIVVKYGLNHVTYLIEHNKAQLVVIAHDVDPIELVVWLHALCRKMEIPYCI---------IVHKKI

Query:  VIRFVLDKPHLNEDKMEFSKILEAIKLQF
             L     NEDKMEFS+ILEAIK  F
Subjt:  VIRFVLDKPHLNEDKMEFSKILEAIKLQF

A0A5D3DB00 60S ribosomal protein L7a

2.0e-33

68.22

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Query:  MLLKYGPKDKTQKR-----------ESKSHDAKKLIVVKYGLNHVTYLIEHNKAQLVVIAHDVDPIELVVWLHALCRKMEIPYCI---------IVHKKI
        MLLKY P+DKTQKR           E KSHDAKK IVVKYGLNHVTYLIE NKAQLVVIAHDVDPIELVVWL ALCRKMEIPYCI         +VHKK 
Subjt:  MLLKYGPKDKTQKR-----------ESKSHDAKKLIVVKYGLNHVTYLIEHNKAQLVVIAHDVDPIELVVWLHALCRKMEIPYCI---------IVHKKI

Query:  VIRFVLDKPHLNEDKMEFSKILEAIKLQF
             L     NEDKMEFS+ILEAIK  F
Subjt:  VIRFVLDKPHLNEDKMEFSKILEAIKLQF

A0A6J1EM71 60S ribosomal protein L7a

5.8e-33

68.22

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Query:  MLLKYGPKDKTQKR-----------ESKSHDAKKLIVVKYGLNHVTYLIEHNKAQLVVIAHDVDPIELVVWLHALCRKMEIPYCI---------IVHKKI
        MLLKY P+DK QKR           E KSHDAKK IVVKYGLNHVTYLIE NKAQLVVIAHDVDPIELVVWL ALCRKMEIPYCI         IVHKK 
Subjt:  MLLKYGPKDKTQKR-----------ESKSHDAKKLIVVKYGLNHVTYLIEHNKAQLVVIAHDVDPIELVVWLHALCRKMEIPYCI---------IVHKKI

Query:  VIRFVLDKPHLNEDKMEFSKILEAIKLQF
             L     NEDKMEFS+ILEAIK  F
Subjt:  VIRFVLDKPHLNEDKMEFSKILEAIKLQF

A0A6J1I354 60S ribosomal protein L7a

7.6e-33

67.44

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Query:  MLLKYGPKDKTQKR-----------ESKSHDAKKLIVVKYGLNHVTYLIEHNKAQLVVIAHDVDPIELVVWLHALCRKMEIPYCI---------IVHKKI
        MLLKY P+DK QKR           E KSHDAKK IV+KYGLNHVTYLIE NKAQLVVIAHDVDPIELVVWL ALCRKMEIPYCI         IVHKK 
Subjt:  MLLKYGPKDKTQKR-----------ESKSHDAKKLIVVKYGLNHVTYLIEHNKAQLVVIAHDVDPIELVVWLHALCRKMEIPYCI---------IVHKKI

Query:  VIRFVLDKPHLNEDKMEFSKILEAIKLQF
             L     NEDKMEFS+ILEAIK  F
Subjt:  VIRFVLDKPHLNEDKMEFSKILEAIKLQF

SwissProt top hits

e value

%identity

Alignment

P0DKK7 60S ribosomal protein L7a-2

1.1e-31

62.79

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Query:  MLLKYGPKDKTQKR-----------ESKSHDAKKLIVVKYGLNHVTYLIEHNKAQLVVIAHDVDPIELVVWLHALCRKMEIPYCI---------IVHKKI
        MLLKY P+DK  K+           E K+ +AKK IVVKYGLNHVTYLIE +KAQLVVIAHDVDPIELVVWL ALCRKME+PYCI         IVHKK 
Subjt:  MLLKYGPKDKTQKR-----------ESKSHDAKKLIVVKYGLNHVTYLIEHNKAQLVVIAHDVDPIELVVWLHALCRKMEIPYCI---------IVHKKI

Query:  VIRFVLDKPHLNEDKMEFSKILEAIKLQF
             L     NEDK+EFSKILEAIK  F
Subjt:  VIRFVLDKPHLNEDKMEFSKILEAIKLQF

P35685 60S ribosomal protein L7a-1

1.1e-31

62.79

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Query:  MLLKYGPKDKTQKR-----------ESKSHDAKKLIVVKYGLNHVTYLIEHNKAQLVVIAHDVDPIELVVWLHALCRKMEIPYCI---------IVHKKI
        MLLKY P+DK  K+           E K+ +AKK IVVKYGLNHVTYLIE +KAQLVVIAHDVDPIELVVWL ALCRKME+PYCI         IVHKK 
Subjt:  MLLKYGPKDKTQKR-----------ESKSHDAKKLIVVKYGLNHVTYLIEHNKAQLVVIAHDVDPIELVVWLHALCRKMEIPYCI---------IVHKKI

Query:  VIRFVLDKPHLNEDKMEFSKILEAIKLQF
             L     NEDK+EFSKILEAIK  F
Subjt:  VIRFVLDKPHLNEDKMEFSKILEAIKLQF

P46223 60S ribosomal protein L7a

1.6e-16

44.96

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Query:  MLLKYGPKDKTQKR---------ESKSHDA---KKLIVVKYGLNHVTYLIEHNKAQLVVIAHDVDPIELVVWLHALCRKMEIPYCIIVHKKIVIRFVLDK
        +L KY P+    K+         ++K  D    KK   V  G N VT LIE  KAQLVVIAHDVDP+ELV++L ALCRKM +PYCI+  K  + R V  K
Subjt:  MLLKYGPKDKTQKR---------ESKSHDA---KKLIVVKYGLNHVTYLIEHNKAQLVVIAHDVDPIELVVWLHALCRKMEIPYCIIVHKKIVIRFVLDK

Query:  PHL--------NEDKMEFSKILEAIKLQF
                   N DK  F K+LEA+K  F
Subjt:  PHL--------NEDKMEFSKILEAIKLQF

P49692 60S ribosomal protein L7a-1

6.8e-31

60.47

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Query:  MLLKYGPKDKTQKR-----------ESKSHDAKKLIVVKYGLNHVTYLIEHNKAQLVVIAHDVDPIELVVWLHALCRKMEIPYCI---------IVHKKI
        +LLKY P+DK  K+           E K  ++KK IVVKYGLNHVTYLIE NKAQLVVIAHDVDPIELVVWL ALCRKME+PYCI         +VH+K 
Subjt:  MLLKYGPKDKTQKR-----------ESKSHDAKKLIVVKYGLNHVTYLIEHNKAQLVVIAHDVDPIELVVWLHALCRKMEIPYCI---------IVHKKI

Query:  VIRFVLDKPHLNEDKMEFSKILEAIKLQF
             L     NEDK+EFSKILEAIK  F
Subjt:  VIRFVLDKPHLNEDKMEFSKILEAIKLQF

Q9LZH9 60S ribosomal protein L7a-2

4.0e-31

60.47

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Query:  MLLKYGPKDKTQKR-----------ESKSHDAKKLIVVKYGLNHVTYLIEHNKAQLVVIAHDVDPIELVVWLHALCRKMEIPYCI---------IVHKKI
        +LLKY P+DK  K+           E K  ++KK IVVKYGLNHVTYLIE NKAQLVVIAHDVDPIELVVWL ALCRKME+PYCI         +VH+K 
Subjt:  MLLKYGPKDKTQKR-----------ESKSHDAKKLIVVKYGLNHVTYLIEHNKAQLVVIAHDVDPIELVVWLHALCRKMEIPYCI---------IVHKKI

Query:  VIRFVLDKPHLNEDKMEFSKILEAIKLQF
             L     NEDK+EFSKILEAIK  F
Subjt:  VIRFVLDKPHLNEDKMEFSKILEAIKLQF

Arabidopsis top hits

e value

%identity

Alignment

AT2G47610.1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein

4.9e-32

60.47

Show/hide

Query:  MLLKYGPKDKTQKR-----------ESKSHDAKKLIVVKYGLNHVTYLIEHNKAQLVVIAHDVDPIELVVWLHALCRKMEIPYCI---------IVHKKI
        +LLKY P+DK  K+           E K  ++KK IVVKYGLNHVTYLIE NKAQLVVIAHDVDPIELVVWL ALCRKME+PYCI         +VH+K 
Subjt:  MLLKYGPKDKTQKR-----------ESKSHDAKKLIVVKYGLNHVTYLIEHNKAQLVVIAHDVDPIELVVWLHALCRKMEIPYCI---------IVHKKI

Query:  VIRFVLDKPHLNEDKMEFSKILEAIKLQF
             L     NEDK+EFSKILEAIK  F
Subjt:  VIRFVLDKPHLNEDKMEFSKILEAIKLQF

AT3G62870.1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein

2.9e-32

60.47

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Query:  MLLKYGPKDKTQKR-----------ESKSHDAKKLIVVKYGLNHVTYLIEHNKAQLVVIAHDVDPIELVVWLHALCRKMEIPYCI---------IVHKKI
        +LLKY P+DK  K+           E K  ++KK IVVKYGLNHVTYLIE NKAQLVVIAHDVDPIELVVWL ALCRKME+PYCI         +VH+K 
Subjt:  MLLKYGPKDKTQKR-----------ESKSHDAKKLIVVKYGLNHVTYLIEHNKAQLVVIAHDVDPIELVVWLHALCRKMEIPYCI---------IVHKKI

Query:  VIRFVLDKPHLNEDKMEFSKILEAIKLQF
             L     NEDK+EFSKILEAIK  F
Subjt:  VIRFVLDKPHLNEDKMEFSKILEAIKLQF

Sequences

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CDS sequence

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mRNA sequence

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ATGTCAAGTAAAATAGATTTTAAACAAAAAAACACTAACTTCTTTGTTATATATAATCCTTTATTCAAAAGGCATCAACTGTGGGGGGTGGGGATGGAGTTGTTAATATT
AGAACTCCACAATGGCTTAATGCTTTTGAAGTATGGGCCAAAGGATAAAACTCAGAAGAGGGAGAGCAAATCACACGATGCCAAAAAGCTTATTGTTGTTAAGTATGGTC
TCAACCATGTGACCTACCTCATTGAACACAACAAAGCACAGTTGGTTGTTATTGCGCATGATGTAGATCCGATCGAGTTGGTTGTTTGGCTACATGCTCTGTGTAGGAAG
ATGGAAATTCCATATTGCATTATTGTCCACAAAAAGATCGTGATCCGCTTTGTGCTTGACAAACCGCATCTGAACGAAGATAAAATGGAGTTCAGCAAGATCCTTGAAGC
TATTAAGTTGCAGTTTGAGTGTGATTCGGGCATCCTCCAACACACTTTCAGCAAAACATTTTGACTCTTTTAGCAAGGTTCATTTTGGTTAACCATAAGCCATGGAAGTC
GATTTAGCAAAAGGAAGTTGATTCGAGCATCAACTAGCAAGGTCTTGAGCCATTTTCATTGATAGAAGAAACGCATACTCGCAATCGGAGTTAGATGAAGTGCGAGTGGA
GTGGGCTGAATTTTTGGATGGATACATATGATGAATTCTTGGGTGGATACTACTTTAGATTGTTCATGTCAATTTTTCGGGTGACTACATATGAAGGTGGCAAATATTCT
TTTTGTGTAAATATGTGGTTTGACATAGGATTTGGATGGCTAAATGAAGTTGCCAAATATTTTGTATAGATGTTTGCTTGAGAT

Protein sequence

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MSSKIDFKQKNTNFFVIYNPLFKRHQLWGVGMELLILELHNGLMLLKYGPKDKTQKRESKSHDAKKLIVVKYGLNHVTYLIEHNKAQLVVIAHDVDPIELVVWLHALCRK
MEIPYCIIVHKKIVIRFVLDKPHLNEDKMEFSKILEAIKLQFECDSGILQHTFSKTF

Tan0002489 (gene) of Snake gourd v1 genome