; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0002526 (gene) of Snake gourd v1 genome

Gene IDTan0002526
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionTranscription factor protein
Genome locationLG11:4538190..4539472
RNA-Seq ExpressionTan0002526
SyntenyTan0002526
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0040008 - regulation of growth (biological process)
GO:0005634 - nucleus (cellular component)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR011598 - Myc-type, basic helix-loop-helix (bHLH) domain
IPR036638 - Helix-loop-helix DNA-binding domain superfamily
IPR044293 - Transcription factor PRE


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7033162.1 Transcription factor PRE5 [Cucurbita argyrosperma subsp. argyrosperma]1.3e-3695.6Show/hide
Query:  MSTRRSRQSGASRITDDQIIELVSKLRQLVPEIRHRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLIMQ
        MSTRRSRQ GASRI+DDQIIEL+SKLR LVPEIRHRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLIMQ
Subjt:  MSTRRSRQSGASRITDDQIIELVSKLRQLVPEIRHRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLIMQ

XP_022134204.1 transcription factor PRE6 [Momordica charantia]5.7e-3796.7Show/hide
Query:  MSTRRSRQSGASRITDDQIIELVSKLRQLVPEIRHRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLIMQ
        MS+RRSRQSG SRI+DDQIIELVSKLRQLVPEIRHRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLIMQ
Subjt:  MSTRRSRQSGASRITDDQIIELVSKLRQLVPEIRHRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLIMQ

XP_022952488.1 transcription factor PRE6-like, partial [Cucurbita moschata]3.7e-3694.51Show/hide
Query:  MSTRRSRQSGASRITDDQIIELVSKLRQLVPEIRHRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLIMQ
        +STRRSRQ GASRI+DDQIIEL+SKLR LVPEIRHRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLIMQ
Subjt:  MSTRRSRQSGASRITDDQIIELVSKLRQLVPEIRHRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLIMQ

XP_023548992.1 transcription factor PRE6-like [Cucurbita pepo subsp. pepo]1.3e-3695.6Show/hide
Query:  MSTRRSRQSGASRITDDQIIELVSKLRQLVPEIRHRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLIMQ
        MSTRRSRQ GASRI+DDQIIEL+SKLR LVPEIRHRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLIMQ
Subjt:  MSTRRSRQSGASRITDDQIIELVSKLRQLVPEIRHRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLIMQ

XP_038890645.1 LOW QUALITY PROTEIN: transcription factor PRE6 [Benincasa hispida]1.3e-3696.7Show/hide
Query:  MSTRRSRQSGASRITDDQIIELVSKLRQLVPEIRHRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLIMQ
        MS+RRSRQS ASRITDDQIIELVSKLRQLVPEIRHRR DKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLIMQ
Subjt:  MSTRRSRQSGASRITDDQIIELVSKLRQLVPEIRHRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLIMQ

TrEMBL top hitse value%identityAlignment
A0A0A0KXB9 Transcription regulator4.0e-3694.51Show/hide
Query:  MSTRRSRQSGASRITDDQIIELVSKLRQLVPEIRHRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLIMQ
        MS+RRSRQS ASRI+DDQIIELVSKLRQLVPEIRHRR DKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTID+DSAEAAIIRSLIMQ
Subjt:  MSTRRSRQSGASRITDDQIIELVSKLRQLVPEIRHRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLIMQ

A0A1S3CB29 transcription factor PRE64.0e-3694.51Show/hide
Query:  MSTRRSRQSGASRITDDQIIELVSKLRQLVPEIRHRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLIMQ
        MS+RRSRQS ASRI+DDQIIELVSKLRQLVPEIRHRR DKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTID+DSAEAAIIRSLIMQ
Subjt:  MSTRRSRQSGASRITDDQIIELVSKLRQLVPEIRHRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLIMQ

A0A5A7T970 Transcription factor PRE64.0e-3694.51Show/hide
Query:  MSTRRSRQSGASRITDDQIIELVSKLRQLVPEIRHRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLIMQ
        MS+RRSRQS ASRI+DDQIIELVSKLRQLVPEIRHRR DKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTID+DSAEAAIIRSLIMQ
Subjt:  MSTRRSRQSGASRITDDQIIELVSKLRQLVPEIRHRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLIMQ

A0A6J1BY51 transcription factor PRE62.8e-3796.7Show/hide
Query:  MSTRRSRQSGASRITDDQIIELVSKLRQLVPEIRHRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLIMQ
        MS+RRSRQSG SRI+DDQIIELVSKLRQLVPEIRHRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLIMQ
Subjt:  MSTRRSRQSGASRITDDQIIELVSKLRQLVPEIRHRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLIMQ

A0A6J1GKQ6 transcription factor PRE6-like1.8e-3694.51Show/hide
Query:  MSTRRSRQSGASRITDDQIIELVSKLRQLVPEIRHRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLIMQ
        +STRRSRQ GASRI+DDQIIEL+SKLR LVPEIRHRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLIMQ
Subjt:  MSTRRSRQSGASRITDDQIIELVSKLRQLVPEIRHRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLIMQ

SwissProt top hitse value%identityAlignment
B8APB5 Transcription factor ILI61.6e-2670.65Show/hide
Query:  MSTR--RSRQSGASRITDDQIIELVSKLRQLVPEIRHRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLIM
        MS+R  RSRQSG+SRITD+QI +LVSKL+ L+PE R R +D+V +S+VLQETCNYIR+LH+EVDDLSERLS+LL+T D  SA+AAIIRSL+M
Subjt:  MSTR--RSRQSGASRITDDQIIELVSKLRQLVPEIRHRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLIM

Q0DUR2 Transcription factor ILI61.6e-2670.65Show/hide
Query:  MSTR--RSRQSGASRITDDQIIELVSKLRQLVPEIRHRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLIM
        MS+R  RSRQSG+SRITD+QI +LVSKL+ L+PE R R +D+V +S+VLQETCNYIR+LH+EVDDLSERLS+LL+T D  SA+AAIIRSL+M
Subjt:  MSTR--RSRQSGASRITDDQIIELVSKLRQLVPEIRHRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLIM

Q8GW32 Transcription factor PRE63.2e-3077.17Show/hide
Query:  MSTR---RSRQSGASRITDDQIIELVSKLRQLVPEIRHRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLI
        MS+R   RSRQSG+SRI+DDQI +LVSKL+ L+PE+R RRSDKVSASKVLQETCNYIRNLHREVDDLS+RLS+LL++ D +SAEAAIIRSL+
Subjt:  MSTR---RSRQSGASRITDDQIIELVSKLRQLVPEIRHRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLI

Q9FLE9 Transcription factor PRE18.6e-2875Show/hide
Query:  MSTRRSRQ-SGASRITDDQIIELVSKLRQLVPEI-RHRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLIM
        MS RRSRQ S A RI+D+Q+I+LVSKLRQ++PEI + RRSDK SASKVLQETCNYIRNL+REVD+LSERLSQLL ++D DS EAA+IRSL+M
Subjt:  MSTRRSRQ-SGASRITDDQIIELVSKLRQLVPEI-RHRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLIM

Q9LJX1 Transcription factor PRE57.8e-2977.17Show/hide
Query:  MSTRRSRQ-SGASRITDDQIIELVSKLRQLVPEI-RHRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLIM
        MS RRSRQ S ASRI+DDQ+I+LVSKLRQ +PEI   RRSDKVSASKVLQETCNYIR LHREVD+LS+RLSQLL ++D DS EAA+IRSL+M
Subjt:  MSTRRSRQ-SGASRITDDQIIELVSKLRQLVPEI-RHRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLIM

Arabidopsis top hitse value%identityAlignment
AT1G26945.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein2.2e-3177.17Show/hide
Query:  MSTR---RSRQSGASRITDDQIIELVSKLRQLVPEIRHRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLI
        MS+R   RSRQSG+SRI+DDQI +LVSKL+ L+PE+R RRSDKVSASKVLQETCNYIRNLHREVDDLS+RLS+LL++ D +SAEAAIIRSL+
Subjt:  MSTR---RSRQSGASRITDDQIIELVSKLRQLVPEIRHRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLI

AT1G74500.1 activation-tagged BRI1(brassinosteroid-insensitive 1)-suppressor 11.8e-2567.37Show/hide
Query:  MSTRRSR---QSGASRITDDQIIELVSKLRQLVPEIR-HRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLIMQ
        MS RRSR    SG SRI++DQI +L+ KL+QL+PE+R  RRSDKVSA++VLQ+TCNYIRNLHREVDDLSERLS+LL+  ++D+A+AA+IRSL+ Q
Subjt:  MSTRRSR---QSGASRITDDQIIELVSKLRQLVPEIR-HRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLIMQ

AT3G28857.1 basic helix-loop-helix (bHLH) DNA-binding family protein5.5e-3077.17Show/hide
Query:  MSTRRSRQ-SGASRITDDQIIELVSKLRQLVPEI-RHRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLIM
        MS RRSRQ S ASRI+DDQ+I+LVSKLRQ +PEI   RRSDKVSASKVLQETCNYIR LHREVD+LS+RLSQLL ++D DS EAA+IRSL+M
Subjt:  MSTRRSRQ-SGASRITDDQIIELVSKLRQLVPEI-RHRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLIM

AT5G15160.1 BANQUO 22.2e-2671.11Show/hide
Query:  STRRSRQ-SGASRITDDQIIELVSKLRQLVPEIR-HRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLI
        S+RRSRQ S +SRI+DDQI +L+SKLRQ +PEIR +RRS+ VSASKVLQETCNYIRNL++E DDLS+RL+QLL +ID +S +AA+IRSLI
Subjt:  STRRSRQ-SGASRITDDQIIELVSKLRQLVPEIR-HRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLI

AT5G39860.1 basic helix-loop-helix (bHLH) DNA-binding family protein6.1e-2975Show/hide
Query:  MSTRRSRQ-SGASRITDDQIIELVSKLRQLVPEI-RHRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLIM
        MS RRSRQ S A RI+D+Q+I+LVSKLRQ++PEI + RRSDK SASKVLQETCNYIRNL+REVD+LSERLSQLL ++D DS EAA+IRSL+M
Subjt:  MSTRRSRQ-SGASRITDDQIIELVSKLRQLVPEI-RHRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLIM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTACCAGAAGATCAAGGCAGTCAGGTGCTTCCAGAATCACCGATGACCAAATCATCGAACTCGTTTCCAAGCTTCGACAACTCGTCCCCGAGATTCGCCATCGCCG
CTCCGACAAGGTATCAGCTTCAAAAGTCCTCCAAGAGACCTGCAATTACATTAGAAACTTGCACAGGGAGGTTGATGACCTAAGTGAGAGACTCTCTCAGCTGTTGTCTA
CAATAGATGCTGATAGTGCAGAGGCAGCCATAATTAGGAGCTTAATTATGCAATAG
mRNA sequenceShow/hide mRNA sequence
CTAACCCAAACCATTTGTCTTCTTCACATCCAACATTTTCCATTTCTCTCTCTCTCTCTCTTCTACCTTTGTTTTCCTTTGTGGTCCTTCCTCTTTATAACTCTCTTATC
ACTTCCCCCTTCCTTCCTTCAAACCTAACCTAGTTTCCAATTCCAACTGAAACTACCCTCTCTTCTTCTTCTTCTTCTTCTTCTTCTCTCTCTCTCTCTCTAACCTTTCC
ACAACCACCACTTTCCCCTCACCTTCCACTTTTTTCCTTTTTAAAACCCTTTCACTCTCTCTTCCCCACAACCACCACCTGTGCCACACCAGTACTCTCCATTAACTCAA
CATTTTATCAACCATGTCTACCAGAAGATCAAGGCAGTCAGGTGCTTCCAGAATCACCGATGACCAAATCATCGAACTCGTTTCCAAGCTTCGACAACTCGTCCCCGAGA
TTCGCCATCGCCGCTCCGACAAGGTATCAGCTTCAAAAGTCCTCCAAGAGACCTGCAATTACATTAGAAACTTGCACAGGGAGGTTGATGACCTAAGTGAGAGACTCTCT
CAGCTGTTGTCTACAATAGATGCTGATAGTGCAGAGGCAGCCATAATTAGGAGCTTAATTATGCAATAGGGG
Protein sequenceShow/hide protein sequence
MSTRRSRQSGASRITDDQIIELVSKLRQLVPEIRHRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDADSAEAAIIRSLIMQ