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Tan0002539 (gene) of Snake gourd v1 genome

Gene IDTan0002539
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionmetallothionein-like protein LSC54
Genome locationLG01:30968871..30969616
RNA-Seq ExpressionTan0002539
SyntenyTan0002539
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7019194.1 hypothetical protein SDJN02_18152 [Cucurbita argyrosperma subsp. argyrosperma]1.6e-0787.5Show/hide
Query:  MASGCKCGDNCSCGDSCNCLSGTIKEATSQVN
        MASGCKCGDNCSCGDSCNCLSGT+KE TS +N
Subjt:  MASGCKCGDNCSCGDSCNCLSGTIKEATSQVN
XP_022997994.1 metallothionein-like protein LSC54 [Cucurbita maxima]7.9e-0764.71Show/hide
Query:  MASGCKCGDNCSCGDSCNCLSGTIKEATSQVNRNNGCDCCDSSCSCDACSC
        M SGCKCGD+CSCGDSCNC SG+I EA   +   +GC  C SSCSCD C+C
Subjt:  MASGCKCGDNCSCGDSCNCLSGTIKEATSQVNRNNGCDCCDSSCSCDACSC
TrEMBL top hitse value%identityAlignment
A0A6J1KD42 metallothionein-like protein LSC543.8e-0764.71Show/hide
Query:  MASGCKCGDNCSCGDSCNCLSGTIKEATSQVNRNNGCDCCDSSCSCDACSC
        M SGCKCGD+CSCGDSCNC SG+I EA   +   +GC  C SSCSCD C+C
Subjt:  MASGCKCGDNCSCGDSCNCLSGTIKEATSQVNRNNGCDCCDSSCSCDACSC
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCTGGCTGCAAGTGTGGTGACAATTGCTCCTGTGGAGATAGCTGCAATTGCCTCTCCGGGACCATCAAAGAAGCCACCTCCCAAGTCAACAGGAACAATGGATG
TGACTGCTGCGACAGCAGTTGCTCGTGCGATGCATGCAGCTGCTGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCTGGCTGCAAGTGTGGTGACAATTGCTCCTGTGGAGATAGCTGCAATTGCCTCTCCGGGACCATCAAAGAAGCCACCTCCCAAGTCAACAGGAACAATGGATG
TGACTGCTGCGACAGCAGTTGCTCGTGCGATGCATGCAGCTGCTGCTGATGAGCAATTGGAGAGATGGATGAGGCCCTTCAACAACAAAGCTTGTGCAATAGAATAAAAT
TATGAATCAACCTGCAAAATTATCCTGTTTTTGCTTTTTTTTTTCTGTCTTTTTTTTGCACTTTGTTTGAATGCTACTTGAAATTTAGTGTGAACTATGTGGTGCTTTGT
TGTGGGCTGTGTGGGTGGGTTTGGGTTGTTGTTTCATATCAAATCTAGAAAGATGTGTCTGGATTATAGTGTGTAATAAAAAAATTTGGTTTTTGTGTAGTCT
Protein sequenceShow/hide protein sequence
MASGCKCGDNCSCGDSCNCLSGTIKEATSQVNRNNGCDCCDSSCSCDACSCC