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Tan0002562 (gene) of Snake gourd v1 genome

Gene IDTan0002562
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionCCHC-type domain-containing protein
Genome locationLG05:50749119..50749965
RNA-Seq ExpressionTan0002562
SyntenyTan0002562
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PQQ12378.1 hypothetical protein Pyn_32588 [Prunus yedoensis var. nudiflora]1.3e-1633.02Show/hide
Query:  EIFRKLAGLNLSKERKGGIVEIGDDEIEDYGRTSETKLVCKVLTGRTVVLEAFRTIMSKIWNLDAPTSFDRVGKGICICIFFAKKDKLQVIRGGPWIFDK
        E+      + L  E +  +V IG+ + +D     +T LV KVLT      EAF+  M KIWN         +G+ + + IF  + D+ +V+R GPW FDK
Subjt:  EIFRKLAGLNLSKERKGGIVEIGDDEIEDYGRTSETKLVCKVLTGRTVVLEAFRTIMSKIWNLDAPTSFDRVGKGICICIFFAKKDKLQVIRGGPWIFDK

Query:  ALVVLEELKGT-----------------------RISRKTGVAFGNKVGQFEGVDLDDERCRGGKSLRARVKIDIQKPLMRAVRILGHGAQECEEKGSNQ
        ALV+LEE  G                         ++ +TG   GN +G+   V    E    G+ LR RVK+DI KPL R  +I     Q       +Q
Subjt:  ALVVLEELKGT-----------------------RISRKTGVAFGNKVGQFEGVDLDDERCRGGKSLRARVKIDIQKPLMRAVRILGHGAQECEEKGSNQ

Query:  VAK-MPFGSWLR
         AK  P+GS+LR
Subjt:  VAK-MPFGSWLR

VVA32948.1 PREDICTED: DUF4283 domain-containing [Prunus dulcis]4.5e-1727.42Show/hide
Query:  EIFRKLAGLNLSKERKGGIVEIGDDEIEDYGRTSETKLVCKVLTGRTVVLEAFRTIMSKIWNLDAPTSFDRVGKGICICIFFAKKDKLQVIRGGPWIFDK
        E+   L    +  E +   +++  ++I+D G   +  LV KVLT      EAF+  M KIW+         +G+ + + IF  + D+L+V+R GPW FDK
Subjt:  EIFRKLAGLNLSKERKGGIVEIGDDEIEDYGRTSETKLVCKVLTGRTVVLEAFRTIMSKIWNLDAPTSFDRVGKGICICIFFAKKDKLQVIRGGPWIFDK

Query:  ALVVLEELKG---------------------------TRISRKTGVAFGNKVGQFEGVDLDDERCRGGKSLRARVKIDIQKPLMRAVRI-----------
        ALV+LE   G                           T + R+ G +FG  +   EG+   D +C  G+ LR RV +D+ KPL R  ++           
Subjt:  ALVVLEELKG---------------------------TRISRKTGVAFGNKVGQFEGVDLDDERCRGGKSLRARVKIDIQKPLMRAVRI-----------

Query:  ---------------LGHGAQECE--EKGSNQVAKMPFGSWLRESSNW
                       LGH  +EC   ++ + Q  + P+GSWL+ + ++
Subjt:  ---------------LGHGAQECE--EKGSNQVAKMPFGSWLRESSNW

XP_022143536.1 uncharacterized protein LOC111013413 [Momordica charantia]5.9e-1740.54Show/hide
Query:  MADPEIFRKLAGLNLSKERKGGIVEIGDDEIEDYGRTSETKLVCKVLTGRTVVLEAFRTIMSKIWNLDAPTSFDRVGKGICICIFFAKKDKLQVIRGGPW
        MAD  + R++  L L+KE KG I ++G+DEIEDY + ++  LVCK+LT + +  E F+ +M +IW ++     + VGK + +C F   +DK +++  GP 
Subjt:  MADPEIFRKLAGLNLSKERKGGIVEIGDDEIEDYGRTSETKLVCKVLTGRTVVLEAFRTIMSKIWNLDAPTSFDRVGKGICICIFFAKKDKLQVIRGGPW

Query:  IFDKALVVLEE
         FDK++V+LEE
Subjt:  IFDKALVVLEE

XP_035547259.1 uncharacterized protein LOC118348856 [Juglans regia]7.7e-1729.73Show/hide
Query:  LNLSKERKGGIVEIGDDEIEDYGRTSETKLVCKVLTGRTVVLEAFRTIMSKIWNLDAPTSFDRVGKGICICIFFAKKDKLQVIRGGPWIFDKALVVLEEL
        L+LS++ KG I  +    +E      E  LV  +LT R    EA + +M K+W       F  +G  + +  F   +DK +++  GPW FD  LV+L++L
Subjt:  LNLSKERKGGIVEIGDDEIEDYGRTSETKLVCKVLTGRTVVLEAFRTIMSKIWNLDAPTSFDRVGKGICICIFFAKKDKLQVIRGGPWIFDKALVVLEEL

Query:  KGTRISRKTGVAFGNKVGQFEGVDLDDERCRGGKSLRARVKIDIQKPLMRAVRI--------------------------LGHGAQECE---EKGSNQVA
        +G   + K G   GNK+G  E VD +      G+ LR RV+++I +PLMR + +                          LGH  ++CE    +G+    
Subjt:  KGTRISRKTGVAFGNKVGQFEGVDLDDERCRGGKSLRARVKIDIQKPLMRAVRI--------------------------LGHGAQECE---EKGSNQVA

Query:  KMPFGSWLRESSNWKGNKHNRG
        ++PFG WL   +     K N G
Subjt:  KMPFGSWLRESSNWKGNKHNRG

XP_038708494.1 uncharacterized protein LOC120003548 [Tripterygium wilfordii]5.9e-1728.46Show/hide
Query:  DPEIFRKLAGLNLSKERKGGIVEIGDDEIEDYGRTSET----KLVCKVLTGRTVVLEAFRTIMSKIWNLDAPTSFDRVGKGICICIFFAKKDKLQVIRGG
        D ++ ++   L+L+ E    +V        D G T E+     L  ++L+ R+   EAF   M  IW       F  VG+ + +  FF+K+D  +V+ G 
Subjt:  DPEIFRKLAGLNLSKERKGGIVEIGDDEIEDYGRTSET----KLVCKVLTGRTVVLEAFRTIMSKIWNLDAPTSFDRVGKGICICIFFAKKDKLQVIRGG

Query:  PWIFDKALVVLEELKGT-----------------------RISRKTGVAFGNKVGQFEGVDLDDERCRGGKSLRARVKIDIQKPLMRAVRI---------
        PW FDK  ++L+E  G                         ++ K G+  G  VG+ E VDLD   C  GK LR R++IDI KPL R V +         
Subjt:  PWIFDKALVVLEELKGT-----------------------RISRKTGVAFGNKVGQFEGVDLDDERCRGGKSLRARVKIDIQKPLMRAVRI---------

Query:  ------------------LGHGAQECEEKGSNQVAKMPFGSWLRES
                          LGH  ++CE   +      P+G WLR S
Subjt:  ------------------LGHGAQECEEKGSNQVAKMPFGSWLRES

TrEMBL top hitse value%identityAlignment
A0A314Z5A5 DUF4283 domain-containing protein6.3e-1733.02Show/hide
Query:  EIFRKLAGLNLSKERKGGIVEIGDDEIEDYGRTSETKLVCKVLTGRTVVLEAFRTIMSKIWNLDAPTSFDRVGKGICICIFFAKKDKLQVIRGGPWIFDK
        E+      + L  E +  +V IG+ + +D     +T LV KVLT      EAF+  M KIWN         +G+ + + IF  + D+ +V+R GPW FDK
Subjt:  EIFRKLAGLNLSKERKGGIVEIGDDEIEDYGRTSETKLVCKVLTGRTVVLEAFRTIMSKIWNLDAPTSFDRVGKGICICIFFAKKDKLQVIRGGPWIFDK

Query:  ALVVLEELKGT-----------------------RISRKTGVAFGNKVGQFEGVDLDDERCRGGKSLRARVKIDIQKPLMRAVRILGHGAQECEEKGSNQ
        ALV+LEE  G                         ++ +TG   GN +G+   V    E    G+ LR RVK+DI KPL R  +I     Q       +Q
Subjt:  ALVVLEELKGT-----------------------RISRKTGVAFGNKVGQFEGVDLDDERCRGGKSLRARVKIDIQKPLMRAVRILGHGAQECEEKGSNQ

Query:  VAK-MPFGSWLR
         AK  P+GS+LR
Subjt:  VAK-MPFGSWLR

A0A5C7IBW4 CCHC-type domain-containing protein1.2e-1529.67Show/hide
Query:  MADPEIFRKLAGLNLSKERKGGIVEIGDDEIEDYGRTSETKLVCKVLTGRTVVLEAFRTIMSKIWNLDAPTSFDRVGKGICICIFFAKKDKLQVIRGGPW
        M + EI R  A + L KER+G + ++  D   D  R   T LV KVL+ + V  + FR +M KIW        + +   I    F    DK ++I GGPW
Subjt:  MADPEIFRKLAGLNLSKERKGGIVEIGDDEIEDYGRTSETKLVCKVLTGRTVVLEAFRTIMSKIWNLDAPTSFDRVGKGICICIFFAKKDKLQVIRGGPW

Query:  IFDKALVVLEELKG---------TRI--------------SRKTGVAFGNKVGQFEGVDLDDERCRGGKSLRARVKIDIQKPLMRAVRI-----------
         F+ AL+V+EE +G         T++              ++  G   G  VG+   VD  D      K LR RV ++I KPL R +RI           
Subjt:  IFDKALVVLEELKG---------TRI--------------SRKTGVAFGNKVGQFEGVDLDDERCRGGKSLRARVKIDIQKPLMRAVRI-----------

Query:  ----------------LGHGAQECEEK----GSNQVAKMPFGSWLR
                        +GH  ++C EK    G        FGSW+R
Subjt:  ----------------LGHGAQECEEK----GSNQVAKMPFGSWLR

A0A5E4G034 PREDICTED: DUF4283 domain-containing2.2e-1727.42Show/hide
Query:  EIFRKLAGLNLSKERKGGIVEIGDDEIEDYGRTSETKLVCKVLTGRTVVLEAFRTIMSKIWNLDAPTSFDRVGKGICICIFFAKKDKLQVIRGGPWIFDK
        E+   L    +  E +   +++  ++I+D G   +  LV KVLT      EAF+  M KIW+         +G+ + + IF  + D+L+V+R GPW FDK
Subjt:  EIFRKLAGLNLSKERKGGIVEIGDDEIEDYGRTSETKLVCKVLTGRTVVLEAFRTIMSKIWNLDAPTSFDRVGKGICICIFFAKKDKLQVIRGGPWIFDK

Query:  ALVVLEELKG---------------------------TRISRKTGVAFGNKVGQFEGVDLDDERCRGGKSLRARVKIDIQKPLMRAVRI-----------
        ALV+LE   G                           T + R+ G +FG  +   EG+   D +C  G+ LR RV +D+ KPL R  ++           
Subjt:  ALVVLEELKG---------------------------TRISRKTGVAFGNKVGQFEGVDLDDERCRGGKSLRARVKIDIQKPLMRAVRI-----------

Query:  ---------------LGHGAQECE--EKGSNQVAKMPFGSWLRESSNW
                       LGH  +EC   ++ + Q  + P+GSWL+ + ++
Subjt:  ---------------LGHGAQECE--EKGSNQVAKMPFGSWLRESSNW

A0A6J1CQJ5 uncharacterized protein LOC1110134132.8e-1740.54Show/hide
Query:  MADPEIFRKLAGLNLSKERKGGIVEIGDDEIEDYGRTSETKLVCKVLTGRTVVLEAFRTIMSKIWNLDAPTSFDRVGKGICICIFFAKKDKLQVIRGGPW
        MAD  + R++  L L+KE KG I ++G+DEIEDY + ++  LVCK+LT + +  E F+ +M +IW ++     + VGK + +C F   +DK +++  GP 
Subjt:  MADPEIFRKLAGLNLSKERKGGIVEIGDDEIEDYGRTSETKLVCKVLTGRTVVLEAFRTIMSKIWNLDAPTSFDRVGKGICICIFFAKKDKLQVIRGGPW

Query:  IFDKALVVLEE
         FDK++V+LEE
Subjt:  IFDKALVVLEE

A0A6P9EID8 uncharacterized protein LOC1183488563.7e-1729.73Show/hide
Query:  LNLSKERKGGIVEIGDDEIEDYGRTSETKLVCKVLTGRTVVLEAFRTIMSKIWNLDAPTSFDRVGKGICICIFFAKKDKLQVIRGGPWIFDKALVVLEEL
        L+LS++ KG I  +    +E      E  LV  +LT R    EA + +M K+W       F  +G  + +  F   +DK +++  GPW FD  LV+L++L
Subjt:  LNLSKERKGGIVEIGDDEIEDYGRTSETKLVCKVLTGRTVVLEAFRTIMSKIWNLDAPTSFDRVGKGICICIFFAKKDKLQVIRGGPWIFDKALVVLEEL

Query:  KGTRISRKTGVAFGNKVGQFEGVDLDDERCRGGKSLRARVKIDIQKPLMRAVRI--------------------------LGHGAQECE---EKGSNQVA
        +G   + K G   GNK+G  E VD +      G+ LR RV+++I +PLMR + +                          LGH  ++CE    +G+    
Subjt:  KGTRISRKTGVAFGNKVGQFEGVDLDDERCRGGKSLRARVKIDIQKPLMRAVRI--------------------------LGHGAQECE---EKGSNQVA

Query:  KMPFGSWLRESSNWKGNKHNRG
        ++PFG WL   +     K N G
Subjt:  KMPFGSWLRESSNWKGNKHNRG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGACCCTGAAATCTTTAGGAAATTAGCGGGGCTAAATCTCTCGAAAGAACGCAAGGGAGGTATAGTCGAAATCGGAGATGACGAAATCGAAGACTATGGAAGAAC
TAGCGAAACAAAGCTGGTTTGCAAAGTTCTCACCGGTCGAACTGTGGTCCTAGAGGCGTTTAGGACGATTATGTCGAAGATCTGGAACCTAGATGCCCCAACCTCTTTTG
ATCGAGTAGGTAAAGGTATATGTATATGCATTTTCTTTGCCAAAAAGGACAAGCTGCAAGTGATTAGAGGAGGCCCATGGATTTTCGACAAAGCCCTAGTGGTGCTCGAA
GAACTGAAAGGTACAAGAATCTCTAGGAAAACTGGAGTGGCTTTTGGAAACAAGGTAGGTCAGTTTGAGGGAGTGGATTTAGATGACGAAAGATGTAGGGGAGGCAAATC
ATTAAGGGCAAGAGTGAAAATTGATATTCAAAAGCCTCTAATGCGTGCTGTGAGGATTTTAGGGCATGGAGCCCAAGAGTGTGAGGAAAAAGGCTCGAATCAAGTTGCTA
AAATGCCTTTTGGGAGTTGGTTACGCGAAAGTTCAAACTGGAAAGGAAATAAACATAACAGAGGAGTCGAAGAGACGAAAGATCAATCGGGAAGGATCTCGATTAGATCT
GAAATAATGGGTAGGGGACGGGGTAAAGGGCGATTTGGGGCGGGAAGGCAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGACCCTGAAATCTTTAGGAAATTAGCGGGGCTAAATCTCTCGAAAGAACGCAAGGGAGGTATAGTCGAAATCGGAGATGACGAAATCGAAGACTATGGAAGAAC
TAGCGAAACAAAGCTGGTTTGCAAAGTTCTCACCGGTCGAACTGTGGTCCTAGAGGCGTTTAGGACGATTATGTCGAAGATCTGGAACCTAGATGCCCCAACCTCTTTTG
ATCGAGTAGGTAAAGGTATATGTATATGCATTTTCTTTGCCAAAAAGGACAAGCTGCAAGTGATTAGAGGAGGCCCATGGATTTTCGACAAAGCCCTAGTGGTGCTCGAA
GAACTGAAAGGTACAAGAATCTCTAGGAAAACTGGAGTGGCTTTTGGAAACAAGGTAGGTCAGTTTGAGGGAGTGGATTTAGATGACGAAAGATGTAGGGGAGGCAAATC
ATTAAGGGCAAGAGTGAAAATTGATATTCAAAAGCCTCTAATGCGTGCTGTGAGGATTTTAGGGCATGGAGCCCAAGAGTGTGAGGAAAAAGGCTCGAATCAAGTTGCTA
AAATGCCTTTTGGGAGTTGGTTACGCGAAAGTTCAAACTGGAAAGGAAATAAACATAACAGAGGAGTCGAAGAGACGAAAGATCAATCGGGAAGGATCTCGATTAGATCT
GAAATAATGGGTAGGGGACGGGGTAAAGGGCGATTTGGGGCGGGAAGGCAATGA
Protein sequenceShow/hide protein sequence
MADPEIFRKLAGLNLSKERKGGIVEIGDDEIEDYGRTSETKLVCKVLTGRTVVLEAFRTIMSKIWNLDAPTSFDRVGKGICICIFFAKKDKLQVIRGGPWIFDKALVVLE
ELKGTRISRKTGVAFGNKVGQFEGVDLDDERCRGGKSLRARVKIDIQKPLMRAVRILGHGAQECEEKGSNQVAKMPFGSWLRESSNWKGNKHNRGVEETKDQSGRISIRS
EIMGRGRGKGRFGAGRQ