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Tan0002563 (gene) of Snake gourd v1 genome

Gene IDTan0002563
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionPlant self-incompatibility protein S1 family
Genome locationLG06:75332004..75332423
RNA-Seq ExpressionTan0002563
SyntenyTan0002563
Gene Ontology termsGO:0060320 - rejection of self pollen (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0016020 - membrane (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN61530.1 hypothetical protein Csa_006387 [Cucumis sativus]1.3e-4062.77Show/hide
Query:  SFSILVLSLLISLFFASLFSIEAL-FDQPKTTVNITNVLES-RSQLTIHCKSGDDDLGIHQLPHLISYEFSFRPNFFGTTLFYCSFQWPNSFHYFEIYKD
        SFS   LSL ISL FA++F+IE   F  P  TVNITN L+   +QLTIHCKSGDDDLG+HQL HL SY F+FRPNF+G+TLFYC+F W  S HYF IY+D
Subjt:  SFSILVLSLLISLFFASLFSIEAL-FDQPKTTVNITNVLES-RSQLTIHCKSGDDDLGIHQLPHLISYEFSFRPNFFGTTLFYCSFQWPNSFHYFEIYKD

Query:  KRDKLLC--TNCYWIVGEKGLCLFNTDTRKYDICYAW
         RD+  C  T C WIVGE+GLC+F+  T  YDICY W
Subjt:  KRDKLLC--TNCYWIVGEKGLCLFNTDTRKYDICYAW

XP_008460739.1 PREDICTED: uncharacterized protein LOC103499501 [Cucumis melo]2.7e-3866.36Show/hide
Query:  TVNITNVLES-RSQLTIHCKSGDDDLGIHQLPHLISYEFSFRPNFFGTTLFYCSFQWPNSFHYFEIYKDKRDKLLC--TNCYWIVGEKGLCLFNTDTRKY
        TVNITN +    +QLT+HCKSGDDDLG+H+LPHL+SY F+FRPNF+G+TLFYC FQW +  HYF+IYKD RD L C  T C WI+ EKG+C+FN DT+ Y
Subjt:  TVNITNVLES-RSQLTIHCKSGDDDLGIHQLPHLISYEFSFRPNFFGTTLFYCSFQWPNSFHYFEIYKDKRDKLLC--TNCYWIVGEKGLCLFNTDTRKY

Query:  DICYAWP
        D CYAWP
Subjt:  DICYAWP

XP_008465559.1 PREDICTED: pumilio homolog 15-like, partial [Cucumis melo]1.5e-3661.98Show/hide
Query:  LFSIEAL-FDQPKTTVNITNVLESRSQLTIHCKSGDDDLGIHQLPHLISYEFSFRPNFFGTTLFYCSFQWPNSFHYFEIYKDKRDKLLCTN-CYWIVGEK
        LF+IE   F  P  TVNITN L  + QLT+HCKSGDDDLGIHQL  L  Y F+FRPNF GTTLFYC+FQWP   H F+IYKD RD+  C   C WIVGE+
Subjt:  LFSIEAL-FDQPKTTVNITNVLESRSQLTIHCKSGDDDLGIHQLPHLISYEFSFRPNFFGTTLFYCSFQWPNSFHYFEIYKDKRDKLLCTN-CYWIVGEK

Query:  GLCLFNTDTRKYDICYAWPPK
        G+C+F+  T+KYD CY W  K
Subjt:  GLCLFNTDTRKYDICYAWPPK

XP_022138779.1 S-protein homolog 5 [Momordica charantia]6.2e-4366.67Show/hide
Query:  SLLISLFFASLFS-----IEALFDQPKTTVNITNVLESRSQLTIHCKSGDDDLGIHQLPHLISYEFSFRPNFFGTTLFYCSFQWPNSFHYFEIYKDKRDK
        SL++SL F  LFS     +EAL    + +VNITN+LES  QLT+HCKS DDDLG HQLP LISY F FRPN + +TLF+CSFQWP SFHYFEIY  KRD+
Subjt:  SLLISLFFASLFS-----IEALFDQPKTTVNITNVLESRSQLTIHCKSGDDDLGIHQLPHLISYEFSFRPNFFGTTLFYCSFQWPNSFHYFEIYKDKRDK

Query:  LLCTNCYWIVGEKGLCLFNTDTRKYDICYAWP
         LCT C WIVGEKGLCL+N+ T KYDICY WP
Subjt:  LLCTNCYWIVGEKGLCLFNTDTRKYDICYAWP

XP_022975612.1 S-protein homolog 3-like, partial [Cucurbita maxima]1.0e-3263.06Show/hide
Query:  ISLFFASLFSI--EALFDQPKTTVNITNVLESRSQLTIHCKSGDDDLGIHQLPHLISYEFSFRPNFFGTTLFYCSFQWPNSFHYFEIYKDKRDKLLC--T
        +SLFF +LF+   E++F  P  TVNITNVLES +QLT+HCKSGDDDLGIHQLP+L  Y F+FRPNF+G+T FYC+FQWP    YF+IYKD RD++ C  T
Subjt:  ISLFFASLFSI--EALFDQPKTTVNITNVLESRSQLTIHCKSGDDDLGIHQLPHLISYEFSFRPNFFGTTLFYCSFQWPNSFHYFEIYKDKRDKLLC--T

Query:  NCYWIVGEKGL
         C WIVG++G+
Subjt:  NCYWIVGEKGL

TrEMBL top hitse value%identityAlignment
A0A0A0LI28 S-protein homolog6.3e-4162.77Show/hide
Query:  SFSILVLSLLISLFFASLFSIEAL-FDQPKTTVNITNVLES-RSQLTIHCKSGDDDLGIHQLPHLISYEFSFRPNFFGTTLFYCSFQWPNSFHYFEIYKD
        SFS   LSL ISL FA++F+IE   F  P  TVNITN L+   +QLTIHCKSGDDDLG+HQL HL SY F+FRPNF+G+TLFYC+F W  S HYF IY+D
Subjt:  SFSILVLSLLISLFFASLFSIEAL-FDQPKTTVNITNVLES-RSQLTIHCKSGDDDLGIHQLPHLISYEFSFRPNFFGTTLFYCSFQWPNSFHYFEIYKD

Query:  KRDKLLC--TNCYWIVGEKGLCLFNTDTRKYDICYAW
         RD+  C  T C WIVGE+GLC+F+  T  YDICY W
Subjt:  KRDKLLC--TNCYWIVGEKGLCLFNTDTRKYDICYAW

A0A1S3CDK4 S-protein homolog1.3e-3866.36Show/hide
Query:  TVNITNVLES-RSQLTIHCKSGDDDLGIHQLPHLISYEFSFRPNFFGTTLFYCSFQWPNSFHYFEIYKDKRDKLLC--TNCYWIVGEKGLCLFNTDTRKY
        TVNITN +    +QLT+HCKSGDDDLG+H+LPHL+SY F+FRPNF+G+TLFYC FQW +  HYF+IYKD RD L C  T C WI+ EKG+C+FN DT+ Y
Subjt:  TVNITNVLES-RSQLTIHCKSGDDDLGIHQLPHLISYEFSFRPNFFGTTLFYCSFQWPNSFHYFEIYKDKRDKLLC--TNCYWIVGEKGLCLFNTDTRKY

Query:  DICYAWP
        D CYAWP
Subjt:  DICYAWP

A0A1S3CP53 S-protein homolog7.2e-3761.98Show/hide
Query:  LFSIEAL-FDQPKTTVNITNVLESRSQLTIHCKSGDDDLGIHQLPHLISYEFSFRPNFFGTTLFYCSFQWPNSFHYFEIYKDKRDKLLCTN-CYWIVGEK
        LF+IE   F  P  TVNITN L  + QLT+HCKSGDDDLGIHQL  L  Y F+FRPNF GTTLFYC+FQWP   H F+IYKD RD+  C   C WIVGE+
Subjt:  LFSIEAL-FDQPKTTVNITNVLESRSQLTIHCKSGDDDLGIHQLPHLISYEFSFRPNFFGTTLFYCSFQWPNSFHYFEIYKDKRDKLLCTN-CYWIVGEK

Query:  GLCLFNTDTRKYDICYAWPPK
        G+C+F+  T+KYD CY W  K
Subjt:  GLCLFNTDTRKYDICYAWPPK

A0A6J1CB24 S-protein homolog3.0e-4366.67Show/hide
Query:  SLLISLFFASLFS-----IEALFDQPKTTVNITNVLESRSQLTIHCKSGDDDLGIHQLPHLISYEFSFRPNFFGTTLFYCSFQWPNSFHYFEIYKDKRDK
        SL++SL F  LFS     +EAL    + +VNITN+LES  QLT+HCKS DDDLG HQLP LISY F FRPN + +TLF+CSFQWP SFHYFEIY  KRD+
Subjt:  SLLISLFFASLFS-----IEALFDQPKTTVNITNVLESRSQLTIHCKSGDDDLGIHQLPHLISYEFSFRPNFFGTTLFYCSFQWPNSFHYFEIYKDKRDK

Query:  LLCTNCYWIVGEKGLCLFNTDTRKYDICYAWP
         LCT C WIVGEKGLCL+N+ T KYDICY WP
Subjt:  LLCTNCYWIVGEKGLCLFNTDTRKYDICYAWP

A0A6J1IDI1 S-protein homolog4.8e-3363.06Show/hide
Query:  ISLFFASLFSI--EALFDQPKTTVNITNVLESRSQLTIHCKSGDDDLGIHQLPHLISYEFSFRPNFFGTTLFYCSFQWPNSFHYFEIYKDKRDKLLC--T
        +SLFF +LF+   E++F  P  TVNITNVLES +QLT+HCKSGDDDLGIHQLP+L  Y F+FRPNF+G+T FYC+FQWP    YF+IYKD RD++ C  T
Subjt:  ISLFFASLFSI--EALFDQPKTTVNITNVLESRSQLTIHCKSGDDDLGIHQLPHLISYEFSFRPNFFGTTLFYCSFQWPNSFHYFEIYKDKRDKLLC--T

Query:  NCYWIVGEKGL
         C WIVG++G+
Subjt:  NCYWIVGEKGL

SwissProt top hitse value%identityAlignment
F4JLQ5 S-protein homolog 22.3e-2445.38Show/hide
Query:  SIEALFDQPKTTVNITNVLESRSQLTIHCKSGDDDLGIHQLPHLISYEFSFRPNFFGTTLFYCSFQWPNSFHYFEIYKDKRD-----KLLCTNCYWIVGE
        S  ++F   K TV I N L ++  L  HCKS DDDLG   L    S+ FSF   FFG TL++CSF WPN  H F+IYKD RD     K     C W +  
Subjt:  SIEALFDQPKTTVNITNVLESRSQLTIHCKSGDDDLGIHQLPHLISYEFSFRPNFFGTTLFYCSFQWPNSFHYFEIYKDKRD-----KLLCTNCYWIVGE

Query:  KGLCLFNTDTRKYDICYAW
         G C FN +T+++D+CY W
Subjt:  KGLCLFNTDTRKYDICYAW

F4JZG1 S-protein homolog 48.5e-1938.97Show/hide
Query:  ILVLSLLISLFFASLF-SIEALFDQPKTTVNITNVLESRSQLTIHCKSGDDDLGIHQLPHLISYEFSFRPNFF-GTTLFYCSFQWPNSFHYFEIYKDKRD
        ++V+ LLI + F+ +    +  +   K+ V ITN L   S L +HCKS DDDLG+  L    S+ F FRP+   G TLF+C F WP    +F IY D RD
Subjt:  ILVLSLLISLFFASLF-SIEALFDQPKTTVNITNVLESRSQLTIHCKSGDDDLGIHQLPHLISYEFSFRPNFF-GTTLFYCSFQWPNSFHYFEIYKDKRD

Query:  ----KLLCTNCYWIVGEKGLCLFNTDTRKYDICYAW
             + C  C W +G+ G C F+     ++ICY W
Subjt:  ----KLLCTNCYWIVGEKGLCLFNTDTRKYDICYAW

O23020 S-protein homolog 52.9e-1942.31Show/hide
Query:  TTVNITNVLESRSQLTIHCKSGDDDLGIHQLPHLISYEFSFRPNFFGTTLFYCSFQWPNSFHYFEIYKDKRDKLLCTNCYWIVGEKGLCLFNTDTRKYDI
        T V +TN++     LTIHCKS  DDLGIH +P    Y F F+PN + +TLF+CSFQW + F  F+IY  +RD+ +C +C W +   G C      +    
Subjt:  TTVNITNVLESRSQLTIHCKSGDDDLGIHQLPHLISYEFSFRPNFFGTTLFYCSFQWPNSFHYFEIYKDKRDKLLCTNCYWIVGEKGLCLFNTDTRKYDI

Query:  CYAW
        C+ W
Subjt:  CYAW

P0DN93 S-protein homolog 295.9e-2038.24Show/hide
Query:  MERSFSILVLSLLISLFFASLFSIEALFDQPKTTVNITNVLESRSQLTIHCKSGDDDLGIHQLPHLISYEFSFRPNFFGTTLFYCSFQWPNSFHYFEIYK
        M+ S  I V+ L I LF+  + S        KT V +TN +  ++ LTI C+S DDDLG H L H  ++ + FRP++F TTLF C F W N+  +F+ Y+
Subjt:  MERSFSILVLSLLISLFFASLFSIEALFDQPKTTVNITNVLESRSQLTIHCKSGDDDLGIHQLPHLISYEFSFRPNFFGTTLFYCSFQWPNSFHYFEIYK

Query:  DKRDKLLCTNCYWIVGEKGLCLFNTDTRKYDICYAW
          RD+  C +C W +     C+     +K+D CY W
Subjt:  DKRDKLLCTNCYWIVGEKGLCLFNTDTRKYDICYAW

Q9FMQ4 S-protein homolog 39.1e-2140.15Show/hide
Query:  ILVLSLLISLFFASLFSIEALFDQPKTT---VNITNVLESRSQLTIHCKSGDDDLGIHQLPHLISYEFSFRPNFFGTTLFYCSFQWPNSFHYFEIYKDKR
        ++V+ LLI + F+    ++  FD   +T   V ITN L     L +HCKS DDDLG+  L    S+ F FR +  GTTLFYC F WP     F+IY D R
Subjt:  ILVLSLLISLFFASLFSIEALFDQPKTT---VNITNVLESRSQLTIHCKSGDDDLGIHQLPHLISYEFSFRPNFFGTTLFYCSFQWPNSFHYFEIYKDKR

Query:  D----KLLCTNCYWIVGEKGLCLFNTDTRKYDICYAW
        D     + C NC W +  +G C+F+     ++ICY W
Subjt:  D----KLLCTNCYWIVGEKGLCLFNTDTRKYDICYAW

Arabidopsis top hitse value%identityAlignment
AT1G04645.1 Plant self-incompatibility protein S1 family2.1e-2042.31Show/hide
Query:  TTVNITNVLESRSQLTIHCKSGDDDLGIHQLPHLISYEFSFRPNFFGTTLFYCSFQWPNSFHYFEIYKDKRDKLLCTNCYWIVGEKGLCLFNTDTRKYDI
        T V +TN++     LTIHCKS  DDLGIH +P    Y F F+PN + +TLF+CSFQW + F  F+IY  +RD+ +C +C W +   G C      +    
Subjt:  TTVNITNVLESRSQLTIHCKSGDDDLGIHQLPHLISYEFSFRPNFFGTTLFYCSFQWPNSFHYFEIYKDKRDKLLCTNCYWIVGEKGLCLFNTDTRKYDI

Query:  CYAW
        C+ W
Subjt:  CYAW

AT3G16970.1 Plant self-incompatibility protein S1 family2.9e-2240.71Show/hide
Query:  FDQPKTTVNITNVLESRSQLTIHCKSGDDDLGIHQLPHLISYEFSFRPNFFGTTLFYCSFQWPNSFHYFEIYKDKRDKLL----CTNCYWIVGEKGLCLF
        FD P+TTV I N L     L  HCKS +DDLG   +    ++ F FRP+ FG TLF+C F W    H+F+IYK  RD+      C  C W + + G C  
Subjt:  FDQPKTTVNITNVLESRSQLTIHCKSGDDDLGIHQLPHLISYEFSFRPNFFGTTLFYCSFQWPNSFHYFEIYKDKRDKLL----CTNCYWIVGEKGLCLF

Query:  NTDTRKYDICYAW
        N ++  +D+C  W
Subjt:  NTDTRKYDICYAW

AT3G17080.1 Plant self-incompatibility protein S1 family8.5e-2240.8Show/hide
Query:  LFFASLFSIEALFDQPKTTVNITNVLESRSQLTIHCKSGDDDLGIHQLPHLISYEFSFRPNFFGTTLFYCSFQWPNSFHYFEIYKDKRDKLL----CTNC
        LFF  +  + A+  +  T+V I N L     L  HCKS +DDLG   L    S+ F F P+ FG TLFYC F W    H F+IYK  RDK      C  C
Subjt:  LFFASLFSIEALFDQPKTTVNITNVLESRSQLTIHCKSGDDDLGIHQLPHLISYEFSFRPNFFGTTLFYCSFQWPNSFHYFEIYKDKRDKLL----CTNC

Query:  YWIVGEKGLCLFNTDTRKYDICYAW
         W + + G C F   T  +D CY+W
Subjt:  YWIVGEKGLCLFNTDTRKYDICYAW

AT4G16195.1 Plant self-incompatibility protein S1 family1.6e-2545.38Show/hide
Query:  SIEALFDQPKTTVNITNVLESRSQLTIHCKSGDDDLGIHQLPHLISYEFSFRPNFFGTTLFYCSFQWPNSFHYFEIYKDKRD-----KLLCTNCYWIVGE
        S  ++F   K TV I N L ++  L  HCKS DDDLG   L    S+ FSF   FFG TL++CSF WPN  H F+IYKD RD     K     C W +  
Subjt:  SIEALFDQPKTTVNITNVLESRSQLTIHCKSGDDDLGIHQLPHLISYEFSFRPNFFGTTLFYCSFQWPNSFHYFEIYKDKRD-----KLLCTNCYWIVGE

Query:  KGLCLFNTDTRKYDICYAW
         G C FN +T+++D+CY W
Subjt:  KGLCLFNTDTRKYDICYAW

AT5G12060.1 Plant self-incompatibility protein S1 family6.5e-2240.15Show/hide
Query:  ILVLSLLISLFFASLFSIEALFDQPKTT---VNITNVLESRSQLTIHCKSGDDDLGIHQLPHLISYEFSFRPNFFGTTLFYCSFQWPNSFHYFEIYKDKR
        ++V+ LLI + F+    ++  FD   +T   V ITN L     L +HCKS DDDLG+  L    S+ F FR +  GTTLFYC F WP     F+IY D R
Subjt:  ILVLSLLISLFFASLFSIEALFDQPKTT---VNITNVLESRSQLTIHCKSGDDDLGIHQLPHLISYEFSFRPNFFGTTLFYCSFQWPNSFHYFEIYKDKR

Query:  D----KLLCTNCYWIVGEKGLCLFNTDTRKYDICYAW
        D     + C NC W +  +G C+F+     ++ICY W
Subjt:  D----KLLCTNCYWIVGEKGLCLFNTDTRKYDICYAW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCGTTCATTTTCGATACTTGTACTATCATTGTTAATCTCGTTGTTTTTTGCTAGCCTATTTAGCATTGAAGCACTCTTTGATCAGCCAAAGACTACAGTCAATAT
AACAAATGTTTTGGAAAGTCGCAGTCAACTCACTATTCATTGCAAATCCGGGGATGACGATTTGGGAATTCACCAATTGCCACATTTGATCAGTTATGAATTCAGTTTTC
GACCAAACTTCTTTGGTACAACGTTGTTCTATTGCAGCTTCCAGTGGCCTAACTCGTTTCATTACTTCGAGATTTACAAGGATAAAAGAGACAAATTGCTTTGCACAAAT
TGTTACTGGATTGTGGGTGAAAAAGGTCTCTGTTTGTTCAATACTGATACTCGCAAGTACGATATTTGCTATGCATGGCCACCTAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGCGTTCATTTTCGATACTTGTACTATCATTGTTAATCTCGTTGTTTTTTGCTAGCCTATTTAGCATTGAAGCACTCTTTGATCAGCCAAAGACTACAGTCAATAT
AACAAATGTTTTGGAAAGTCGCAGTCAACTCACTATTCATTGCAAATCCGGGGATGACGATTTGGGAATTCACCAATTGCCACATTTGATCAGTTATGAATTCAGTTTTC
GACCAAACTTCTTTGGTACAACGTTGTTCTATTGCAGCTTCCAGTGGCCTAACTCGTTTCATTACTTCGAGATTTACAAGGATAAAAGAGACAAATTGCTTTGCACAAAT
TGTTACTGGATTGTGGGTGAAAAAGGTCTCTGTTTGTTCAATACTGATACTCGCAAGTACGATATTTGCTATGCATGGCCACCTAAATAA
Protein sequenceShow/hide protein sequence
MERSFSILVLSLLISLFFASLFSIEALFDQPKTTVNITNVLESRSQLTIHCKSGDDDLGIHQLPHLISYEFSFRPNFFGTTLFYCSFQWPNSFHYFEIYKDKRDKLLCTN
CYWIVGEKGLCLFNTDTRKYDICYAWPPK