CuGenDBv2

Gene ID	Tan0002583
Organism	Trichosanthes anguina (Snake gourd v1)
Description	selenoprotein H-like
Genome location	LG02:94870905..94875185
RNA-Seq Expression	Tan0002583
Synteny	Tan0002583
Gene Ontology terms	GO:0005794 - Golgi apparatus (cellular component)
InterPro domains	IPR036249 - Thioredoxin-like superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6598818.1 hypothetical protein SDJN03_08596, partial [Cucurbita argyrosperma subsp. sororia]

4.9e-69

80.9

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Query:  MAPKKRSKTQEDEAVA---KPAPASSRVTRRSSRLAANSKADLAVEEAVAELPRSKKAKRAPKENGKAEVVENEGEEVDAVLEKLGEDAKGRTVVIEHCK
        MAP+KRSK QEDE  A   KPAP SS VTRRS RLA NSKADL VEEAV ELP+SKK KRAPKENGKA+ V NEGEE+DA  +KL +DAK RTVVIE CK
Subjt:  MAPKKRSKTQEDEAVA---KPAPASSRVTRRSSRLAANSKADLAVEEAVAELPRSKKAKRAPKENGKAEVVENEGEEVDAVLEKLGEDAKGRTVVIEHCK

Query:  QCQSFKKRAIEVQNGLENGVPGITVLLNPDKPRRGCFEIRNEDGEKFISLLDMKRPFTRMKELNMEDVISDIIEKIKG
        QCQSFKKRAI+VQ+GLENGV GITVLLNP+KPR+GCFEIR++DGEKFISLLDMKRPFTRMKELNME+VISDIIEKIKG
Subjt:  QCQSFKKRAIEVQNGLENGVPGITVLLNPDKPRRGCFEIRNEDGEKFISLLDMKRPFTRMKELNMEDVISDIIEKIKG

XP_022950994.1 selenoprotein H-like isoform X1 [Cucurbita moschata]

9.5e-73

85.23

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Query:  MAPKKRSKTQEDE-AVAKPAPASSRVTRRSSRLAANSKADLAVEEAVAELPRSKKAKRAPKENGKAEVVENEGEEVDAVLEKLGEDAKGRTVVIEHCKQC
        MAPKKRSK QEDE AVAKP PASSRVTRRS RLA NSKADL VEE V +LP+ KKAKR PKENGKAE VENEGE++DA  EKLG +AK R VVIEHCKQC
Subjt:  MAPKKRSKTQEDE-AVAKPAPASSRVTRRSSRLAANSKADLAVEEAVAELPRSKKAKRAPKENGKAEVVENEGEEVDAVLEKLGEDAKGRTVVIEHCKQC

Query:  QSFKKRAIEVQNGLENGVPGITVLLNPDKPRRGCFEIRNEDGEKFISLLDMKRPFTRMKELNMEDVISDIIEKIKG
        QSFKKRA+EVQNGLE GVPGITVLLNPDKPRRGCFEIR+EDGEKFISLLDMKRPFTRMKEL+ME+VISDIIEKIKG
Subjt:  QSFKKRAIEVQNGLENGVPGITVLLNPDKPRRGCFEIRNEDGEKFISLLDMKRPFTRMKELNMEDVISDIIEKIKG

XP_023002520.1 selenoprotein H-like isoform X1 [Cucurbita maxima]

2.0e-70

83.52

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Query:  MAPKKRSKTQEDE-AVAKPAPASSRVTRRSSRLAANSKADLAVEEAVAELPRSKKAKRAPKENGKAEVVENEGEEVDAVLEKLGEDAKGRTVVIEHCKQC
        MAPKKRSK QEDE A AKP P SSRVTRRS RLAANSKADL VEE V +LP+ KKAKRAPKEN KAE VENEGE++DA  EKLG +AK R VVIEHCKQC
Subjt:  MAPKKRSKTQEDE-AVAKPAPASSRVTRRSSRLAANSKADLAVEEAVAELPRSKKAKRAPKENGKAEVVENEGEEVDAVLEKLGEDAKGRTVVIEHCKQC

Query:  QSFKKRAIEVQNGLENGVPGITVLLNPDKPRRGCFEIRNEDGEKFISLLDMKRPFTRMKELNMEDVISDIIEKIKG
        QSFKKRA+EVQNGLE GVPGITVLLNPDK RRGCFEIR+EDGEKFISLLDMKRPFT+MKEL+ME+VISDIIEKIKG
Subjt:  QSFKKRAIEVQNGLENGVPGITVLLNPDKPRRGCFEIRNEDGEKFISLLDMKRPFTRMKELNMEDVISDIIEKIKG

XP_023536837.1 selenoprotein H-like [Cucurbita pepo subsp. pepo]

5.6e-73

85.8

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Query:  MAPKKRSKTQEDE-AVAKPAPASSRVTRRSSRLAANSKADLAVEEAVAELPRSKKAKRAPKENGKAEVVENEGEEVDAVLEKLGEDAKGRTVVIEHCKQC
        MAPKKRSK QEDE A AKP PASSR TRRS RLAANSKADL VEE V +LP+ KKAKRAPKENGKAE VENEGE++DA  EKLG +AK R VVIEHCKQC
Subjt:  MAPKKRSKTQEDE-AVAKPAPASSRVTRRSSRLAANSKADLAVEEAVAELPRSKKAKRAPKENGKAEVVENEGEEVDAVLEKLGEDAKGRTVVIEHCKQC

Query:  QSFKKRAIEVQNGLENGVPGITVLLNPDKPRRGCFEIRNEDGEKFISLLDMKRPFTRMKELNMEDVISDIIEKIKG
        QSFKKRAIEVQNGLE GVPGITVLLNPDKPRRGCFEIR+EDGEKFISLLDMKRPFTRMKEL+ME+VISDIIEKIKG
Subjt:  QSFKKRAIEVQNGLENGVPGITVLLNPDKPRRGCFEIRNEDGEKFISLLDMKRPFTRMKELNMEDVISDIIEKIKG

XP_038886764.1 selenoprotein H [Benincasa hispida]

4.4e-70

83.52

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Query:  MAPKKRSKTQEDE-AVAKPAPASSRVTRRSSRLAANSKADLAVEEAVAELPRSKKAKRAPKENGKAEVVENEGEEVDAVLEKLGEDAKGRTVVIEHCKQC
        MAP+KRSK QEDE A  K APASSRVTR S+RLAANSKAD AV+EAV E  +SKKAKRAPKENGK + VENEG EVDA LEKL +D K RTVVIEHCKQC
Subjt:  MAPKKRSKTQEDE-AVAKPAPASSRVTRRSSRLAANSKADLAVEEAVAELPRSKKAKRAPKENGKAEVVENEGEEVDAVLEKLGEDAKGRTVVIEHCKQC

Query:  QSFKKRAIEVQNGLENGVPGITVLLNPDKPRRGCFEIRNEDGEKFISLLDMKRPFTRMKELNMEDVISDIIEKIKG
        QSFKKRAI+VQNGLENGVPGITV+LNPD PRRGCFEIR+EDGEKFISLLDMKRPFTRMKEL+ME+VISDIIEKIKG
Subjt:  QSFKKRAIEVQNGLENGVPGITVLLNPDKPRRGCFEIRNEDGEKFISLLDMKRPFTRMKELNMEDVISDIIEKIKG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LPC9 Uncharacterized protein

4.2e-66

79.55

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Query:  MAPKKRSKTQEDE-AVAKPAPASSRVTRRSSRLAANSKADLAVEEAVAELPRSKKAKRAPKENGKAEVVENEGEEVDAVLEKLGEDAKGRTVVIEHCKQC
        MAP+KR+K QE++  V KPAPA+SR+TR S+RLAANSKADL     V ELP+SKKAKRAPKENGK E VEN+  +VD  L KL +DAK RTVVIEHCKQC
Subjt:  MAPKKRSKTQEDE-AVAKPAPASSRVTRRSSRLAANSKADLAVEEAVAELPRSKKAKRAPKENGKAEVVENEGEEVDAVLEKLGEDAKGRTVVIEHCKQC

Query:  QSFKKRAIEVQNGLENGVPGITVLLNPDKPRRGCFEIRNEDGEKFISLLDMKRPFTRMKELNMEDVISDIIEKIKG
        QSFKKRAI+VQ GLENGVPGITVLLNPDKPRRGCFEIR+EDGEKFISLLDMKRPFTRMKELNM++VISDIIEKIKG
Subjt:  QSFKKRAIEVQNGLENGVPGITVLLNPDKPRRGCFEIRNEDGEKFISLLDMKRPFTRMKELNMEDVISDIIEKIKG

A0A1S3BBW1 selenoprotein H

3.2e-66

80.11

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Query:  MAPKKRSKTQEDE-AVAKPAPASSRVTRRSSRLAANSKADLAVEEAVAELPRSKKAKRAPKENGKAEVVENEGEEVDAVLEKLGEDAKGRTVVIEHCKQC
        MAP+KRSK QE+E A+ KPAPA+SRVTR S+RLAANSKADL     V ELP+SKKAKRAPKENGK E VEN+  +VD  LEK  +DAK RTVVIEHCKQC
Subjt:  MAPKKRSKTQEDE-AVAKPAPASSRVTRRSSRLAANSKADLAVEEAVAELPRSKKAKRAPKENGKAEVVENEGEEVDAVLEKLGEDAKGRTVVIEHCKQC

Query:  QSFKKRAIEVQNGLENGVPGITVLLNPDKPRRGCFEIRNEDGEKFISLLDMKRPFTRMKELNMEDVISDIIEKIKG
        QSFKKRAI+VQ GLENGVPGITVLLNPDKPRRGCFEIR+EDG+KFISLLDMKRPFTRMKEL+M++VISDIIEKIKG
Subjt:  QSFKKRAIEVQNGLENGVPGITVLLNPDKPRRGCFEIRNEDGEKFISLLDMKRPFTRMKELNMEDVISDIIEKIKG

A0A6J1GHF7 selenoprotein H-like isoform X1

4.6e-73

85.23

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Query:  MAPKKRSKTQEDE-AVAKPAPASSRVTRRSSRLAANSKADLAVEEAVAELPRSKKAKRAPKENGKAEVVENEGEEVDAVLEKLGEDAKGRTVVIEHCKQC
        MAPKKRSK QEDE AVAKP PASSRVTRRS RLA NSKADL VEE V +LP+ KKAKR PKENGKAE VENEGE++DA  EKLG +AK R VVIEHCKQC
Subjt:  MAPKKRSKTQEDE-AVAKPAPASSRVTRRSSRLAANSKADLAVEEAVAELPRSKKAKRAPKENGKAEVVENEGEEVDAVLEKLGEDAKGRTVVIEHCKQC

Query:  QSFKKRAIEVQNGLENGVPGITVLLNPDKPRRGCFEIRNEDGEKFISLLDMKRPFTRMKELNMEDVISDIIEKIKG
        QSFKKRA+EVQNGLE GVPGITVLLNPDKPRRGCFEIR+EDGEKFISLLDMKRPFTRMKEL+ME+VISDIIEKIKG
Subjt:  QSFKKRAIEVQNGLENGVPGITVLLNPDKPRRGCFEIRNEDGEKFISLLDMKRPFTRMKELNMEDVISDIIEKIKG

A0A6J1K9R2 selenoprotein H-like

4.5e-68

79.33

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Query:  MAPKKRSKTQEDEAVA----KPAPASSRVTRRSSRLAANSKADLAVEEAVAELPRSKKAKRAPKENGKAEVVENEGEEVDAVLEKLGEDAKGRTVVIEHC
        MAP+KRSK QED+  A    KPAP SS VTRRS RLA NS ADL VEEAV ELP+SKK KRAPKENGKA+ V NEGEE+DA  +KL +DAK RTVVIE C
Subjt:  MAPKKRSKTQEDEAVA----KPAPASSRVTRRSSRLAANSKADLAVEEAVAELPRSKKAKRAPKENGKAEVVENEGEEVDAVLEKLGEDAKGRTVVIEHC

Query:  KQCQSFKKRAIEVQNGLENGVPGITVLLNPDKPRRGCFEIRNEDGEKFISLLDMKRPFTRMKELNMEDVISDIIEKIKG
        KQCQSFKKRAI+VQ+GLENGV GITVLLNP+KPR+GCFEIR++DGEKFISLLDMKRPFTRMKELNME+VISDIIEKIKG
Subjt:  KQCQSFKKRAIEVQNGLENGVPGITVLLNPDKPRRGCFEIRNEDGEKFISLLDMKRPFTRMKELNMEDVISDIIEKIKG

A0A6J1KP64 selenoprotein H-like isoform X1

9.6e-71

83.52

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Query:  MAPKKRSKTQEDE-AVAKPAPASSRVTRRSSRLAANSKADLAVEEAVAELPRSKKAKRAPKENGKAEVVENEGEEVDAVLEKLGEDAKGRTVVIEHCKQC
        MAPKKRSK QEDE A AKP P SSRVTRRS RLAANSKADL VEE V +LP+ KKAKRAPKEN KAE VENEGE++DA  EKLG +AK R VVIEHCKQC
Subjt:  MAPKKRSKTQEDE-AVAKPAPASSRVTRRSSRLAANSKADLAVEEAVAELPRSKKAKRAPKENGKAEVVENEGEEVDAVLEKLGEDAKGRTVVIEHCKQC

Query:  QSFKKRAIEVQNGLENGVPGITVLLNPDKPRRGCFEIRNEDGEKFISLLDMKRPFTRMKELNMEDVISDIIEKIKG
        QSFKKRA+EVQNGLE GVPGITVLLNPDK RRGCFEIR+EDGEKFISLLDMKRPFT+MKEL+ME+VISDIIEKIKG
Subjt:  QSFKKRAIEVQNGLENGVPGITVLLNPDKPRRGCFEIRNEDGEKFISLLDMKRPFTRMKELNMEDVISDIIEKIKG

SwissProt top hits

e value

%identity

Alignment

Q3UQA7 Selenoprotein H

2.3e-05

27.87

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Query:  RSKKAKRAPKENGKAEVVENEGEEVDAVLEKLGEDAKGRTVVIEHCKQCQSFKKRAIEVQNGLENGVPGITVLLNPDKPRRGCFEI---RNEDGEKFISL
        R +KA  AP E                 ++K  + A+G TVVIEHC   + + + A  +   L+   P + V +NP KPRRG FE+   R+++    +  
Subjt:  RSKKAKRAPKENGKAEVVENEGEEVDAVLEKLGEDAKGRTVVIEHCKQCQSFKKRAIEVQNGLENGVPGITVLLNPDKPRRGCFEI---RNEDGEKFISL

Query:  LDMKRPFTRMKELNMEDVISDI
           K P  ++K    ++V+ ++
Subjt:  LDMKRPFTRMKELNMEDVISDI

Q4R5Y4 Selenoprotein H

8.8e-05

36.99

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Query:  KAEVVENEGEEVDAVLEKLGEDAKGRTVVIEHCKQCQSFKKRAIEVQNGLENGVPGITVLLNPDKPRRGCFEI
        KAE       E    L   GE  +  TVVIEHC   + +   A  +   L    P + V +NP KPRRG FE+
Subjt:  KAEVVENEGEEVDAVLEKLGEDAKGRTVVIEHCKQCQSFKKRAIEVQNGLENGVPGITVLLNPDKPRRGCFEI

Q8IZQ5 Selenoprotein H

1.5e-04

37.65

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Query:  AKRAPKENGKAEVVENEGEEVDAVLEKL---GEDAKGRTVVIEHCKQCQSFKKRAIEVQNGLENGVPGITVLLNPDKPRRGCFEI
        A R  K   +A VV      V    EKL   GE  +  TVVIEHC   + + + A  +   L    P + V +NP KPRRG FE+
Subjt:  AKRAPKENGKAEVVENEGEEVDAVLEKL---GEDAKGRTVVIEHCKQCQSFKKRAIEVQNGLENGVPGITVLLNPDKPRRGCFEI

Arabidopsis top hits

e value

%identity

Alignment

AT2G24440.1 selenium binding

1.1e-34

47.54

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Query:  MAPKKRSKTQEDEAVAKPAPASS--RVTRRSSRLAANSKADLAVEEAVAELPRSKKA-------KRAPKENGKAEVVENEGEEVDAVLEKLGEDAKGRTV
        MA KK     + +A+A      S  R TR  ++   +S   + +E    +  ++ KA       K+  KE    ++ + E E+ DA  ++  +D+  + +
Subjt:  MAPKKRSKTQEDEAVAKPAPASS--RVTRRSSRLAANSKADLAVEEAVAELPRSKKA-------KRAPKENGKAEVVENEGEEVDAVLEKLGEDAKGRTV

Query:  VIEHCKQCQSFKKRAIEVQNGLENGVPGITVLLNPDKPRRGCFEIRNEDGEKFISLLDMKRPFTRMKELNMEDVISDIIEKIK
        VIEHCKQC+SFK+RA EV+ GLE  VPGI V +NPDKPRRGCFEIR E GE FISLL MKRPFT MKELNME+VI+DI+EKIK
Subjt:  VIEHCKQCQSFKKRAIEVQNGLENGVPGITVLLNPDKPRRGCFEIRNEDGEKFISLLDMKRPFTRMKELNMEDVISDIIEKIK

AT4G31360.1 selenium binding

8.4e-35

49.46

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Query:  MAPKKRSKTQEDEAVAKPAPASSRVTR-RSSRLAANSKADLAVEEAVAELPRSKKAKR--------APKENGKAEVVENEGEEVDAVLEKLG---EDAKG
        M PKK     E++A      ASSRVTR   SR  + ++ + A     A  P +KKAKR          K+  K E VE   E V+  +EK     ED   
Subjt:  MAPKKRSKTQEDEAVAKPAPASSRVTR-RSSRLAANSKADLAVEEAVAELPRSKKAKR--------APKENGKAEVVENEGEEVDAVLEKLG---EDAKG

Query:  RTVVIEHCKQCQSFKKRAIEVQNGLENGVPGITVLLNPDKPRRGCFEIRNEDGEKFISLLDMKRPFTRMKELNMEDVISDIIEKIK
          +VIEHCKQC +FK RAI+V+  LE  VPG+TV LNP+KPRRGCFEIR E G+ FISLL+MKRPF  MK L+ME+VI DII+K+K
Subjt:  RTVVIEHCKQCQSFKKRAIEVQNGLENGVPGITVLLNPDKPRRGCFEIRNEDGEKFISLLDMKRPFTRMKELNMEDVISDIIEKIK

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGCGCCCAAGAAGCGAAGCAAGACCCAGGAAGACGAGGCCGTGGCGAAGCCGGCTCCGGCGTCGTCAAGGGTGACTCGGAGGTCGTCCCGACTGGCGGCGAACTCGAA
GGCTGATTTGGCGGTGGAGGAGGCTGTGGCGGAGTTGCCGAGGAGTAAGAAGGCGAAACGTGCTCCGAAGGAGAATGGGAAGGCGGAGGTAGTTGAAAATGAGGGGGAGG
AAGTTGATGCTGTTTTGGAGAAGCTTGGCGAGGATGCGAAGGGCAGAACGGTTGTGATTGAACATTGCAAACAGTGCCAATCTTTCAAGAAAAGAGCCATCGAGGTGCAA
AATGGTCTAGAGAATGGTGTTCCTGGGATCACTGTGCTGCTCAACCCAGATAAGCCTAGAAGGGGATGCTTTGAAATTCGGAATGAAGATGGCGAGAAGTTTATCAGTCT
TCTGGACATGAAGCGGCCATTTACTCGCATGAAGGAACTGAACATGGAGGATGTTATTTCAGATATCATTGAGAAGATAAAAGGATAA

mRNA sequence

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ATTATGTTAGAAACTAAAAAAGGCGACGTGACAATAAATGGTGGTGGAGTCTGGCGCCATTCTTGGGACTTCGTGCCGCCATTTCCTTGCACAGAAGAAACCAAGTGGAA
CTGCGTGGACGTCGTACGATCACCCAATCGACGGCCACGATCCATTCTCACACTCCCAATCCATCTCCACCGTCGCTTCAAAATCCCACCGCCGATACCCAAAGCGCGGG
AAAAACAAACCCTATCCTTTGTATATCACTGCCAACCAACGGTCACGTACACAACTTTCAGTGGAAGTGGAACAGAGCAGATTCAAGCCGATAAATTTCCTTTCTTCTTC
CTTTCCACTAAGTAGCTTTGTGTTTTTTAGGGTTTCAGGTCTTCTTTCATGGCGCCCAAGAAGCGAAGCAAGACCCAGGAAGACGAGGCCGTGGCGAAGCCGGCTCCGGC
GTCGTCAAGGGTGACTCGGAGGTCGTCCCGACTGGCGGCGAACTCGAAGGCTGATTTGGCGGTGGAGGAGGCTGTGGCGGAGTTGCCGAGGAGTAAGAAGGCGAAACGTG
CTCCGAAGGAGAATGGGAAGGCGGAGGTAGTTGAAAATGAGGGGGAGGAAGTTGATGCTGTTTTGGAGAAGCTTGGCGAGGATGCGAAGGGCAGAACGGTTGTGATTGAA
CATTGCAAACAGTGCCAATCTTTCAAGAAAAGAGCCATCGAGGTGCAAAATGGTCTAGAGAATGGTGTTCCTGGGATCACTGTGCTGCTCAACCCAGATAAGCCTAGAAG
GGGATGCTTTGAAATTCGGAATGAAGATGGCGAGAAGTTTATCAGTCTTCTGGACATGAAGCGGCCATTTACTCGCATGAAGGAACTGAACATGGAGGATGTTATTTCAG
ATATCATTGAGAAGATAAAAGGATAATGAAAGCCTTTGATGGCAAATTGTCTTTTATAAGGATGCAATGTTTTTTGTGGTGGTTTTGAAGCTAACCAACCAGAGTAGCTT
TGATGGTGGAGACTTAGCAAATGATCACTGCCAATGCCAATGTTGTGTTGGTATTTGATTGCAAAGGTAAAGCCATCAGGTTTGAACAAACACAGGGTGGATTATTTTTT
GGTTTAAGCTTCAAAATGAATGAGTCTGTCTTTGGAGAAGGTTGCCCTTTGTATTATTAGTAGTGGATACCTACTGTTATAATTAGAGAGTGGCTCCATGTTGCATCCTT
AAATTGTGTGTATTTTTGTGTGAATCAACCGAGTTTTCTTTGCA

Protein sequence

Show/hide protein sequence

MAPKKRSKTQEDEAVAKPAPASSRVTRRSSRLAANSKADLAVEEAVAELPRSKKAKRAPKENGKAEVVENEGEEVDAVLEKLGEDAKGRTVVIEHCKQCQSFKKRAIEVQ
NGLENGVPGITVLLNPDKPRRGCFEIRNEDGEKFISLLDMKRPFTRMKELNMEDVISDIIEKIKG

Tan0002583 (gene) of Snake gourd v1 genome