CuGenDBv2

Gene ID	Tan0002588
Organism	Trichosanthes anguina (Snake gourd v1)
Description	cytochrome c oxidase assembly factor 6
Genome location	LG09:67342202..67343122
RNA-Seq Expression	Tan0002588
Synteny	Tan0002588
Gene Ontology terms	GO:0005739 - mitochondrion (cellular component) GO:0045277 - respiratory chain complex IV (cellular component)
InterPro domains	IPR003213 - Cytochrome c oxidase, subunit VIb IPR036549 - Cytochrome c oxidase, subunit VIb superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_008443871.1 PREDICTED: uncharacterized protein LOC103487365 isoform X1 [Cucumis melo]

1.1e-53

91.23

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Query:  MAVEADTSGGLDEVHSDVLEESRQACYKARDAFYACVEKESDKKPTEIASVGLLYPAECKASRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG
        MAVEAD+SGG DEVH+DVL ESRQACYKARDAFYACVEKESDKKPTEIASVGL+YPAECKA RA++VKLCRASWVKHFDRKFCQNSRVQRLLDDKD RRG
Subjt:  MAVEADTSGGLDEVHSDVLEESRQACYKARDAFYACVEKESDKKPTEIASVGLLYPAECKASRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG

Query:  PLILPQPYTFKPTS
        PLILPQPYTFKPT+
Subjt:  PLILPQPYTFKPTS

XP_022134674.1 uncharacterized protein LOC111006886 [Momordica charantia]

1.0e-54

94.74

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Query:  MAVEADTSGGLDEVHSDVLEESRQACYKARDAFYACVEKESDKKPTEIASVGLLYPAECKASRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG
        MAVEAD SGGLDEVHSDVL  SRQACYKARDAFYACVEKESDKKPTEIASVGL+YPAECKA RAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG
Subjt:  MAVEADTSGGLDEVHSDVLEESRQACYKARDAFYACVEKESDKKPTEIASVGLLYPAECKASRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG

Query:  PLILPQPYTFKPTS
        PL LPQPYTFKPTS
Subjt:  PLILPQPYTFKPTS

XP_022926034.1 cytochrome c oxidase assembly factor 6 [Cucurbita moschata]

1.4e-53

92.11

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Query:  MAVEADTSGGLDEVHSDVLEESRQACYKARDAFYACVEKESDKKPTEIASVGLLYPAECKASRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG
        MA E D SGG +EVH+DVL E RQACYKARDAFYACVEKESDKKPTEIASVGLLYPAECKASRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG
Subjt:  MAVEADTSGGLDEVHSDVLEESRQACYKARDAFYACVEKESDKKPTEIASVGLLYPAECKASRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG

Query:  PLILPQPYTFKPTS
        PL+LPQPYTFKPTS
Subjt:  PLILPQPYTFKPTS

XP_022973432.1 cytochrome c oxidase assembly factor 6 [Cucurbita maxima]

6.5e-54

92.11

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Query:  MAVEADTSGGLDEVHSDVLEESRQACYKARDAFYACVEKESDKKPTEIASVGLLYPAECKASRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG
        MA+E D SGG +EVH+DVL E RQACYKARDAFYACVEKESDKKPTEIASVGLLYPAECKASRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG
Subjt:  MAVEADTSGGLDEVHSDVLEESRQACYKARDAFYACVEKESDKKPTEIASVGLLYPAECKASRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG

Query:  PLILPQPYTFKPTS
        PL+LPQPYTFKPTS
Subjt:  PLILPQPYTFKPTS

XP_038878579.1 uncharacterized protein LOC120070767 [Benincasa hispida]

4.5e-55

94.74

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Query:  MAVEADTSGGLDEVHSDVLEESRQACYKARDAFYACVEKESDKKPTEIASVGLLYPAECKASRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG
        MAVEAD SGGLDEVHSDVL ESRQACYKARDAFYACVEKESDKKPTEIASVGL+YPAECKA RA FVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG
Subjt:  MAVEADTSGGLDEVHSDVLEESRQACYKARDAFYACVEKESDKKPTEIASVGLLYPAECKASRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG

Query:  PLILPQPYTFKPTS
        PLILPQPYTFKPT+
Subjt:  PLILPQPYTFKPTS

TrEMBL top hits

e value

%identity

Alignment

A0A1S3B9T5 uncharacterized protein LOC103487365 isoform X1

5.3e-54

91.23

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Query:  MAVEADTSGGLDEVHSDVLEESRQACYKARDAFYACVEKESDKKPTEIASVGLLYPAECKASRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG
        MAVEAD+SGG DEVH+DVL ESRQACYKARDAFYACVEKESDKKPTEIASVGL+YPAECKA RA++VKLCRASWVKHFDRKFCQNSRVQRLLDDKD RRG
Subjt:  MAVEADTSGGLDEVHSDVLEESRQACYKARDAFYACVEKESDKKPTEIASVGLLYPAECKASRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG

Query:  PLILPQPYTFKPTS
        PLILPQPYTFKPT+
Subjt:  PLILPQPYTFKPTS

A0A5A7SVN2 Cytochrome c oxidase assembly factor 6 isoform X3

5.3e-54

91.23

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Query:  MAVEADTSGGLDEVHSDVLEESRQACYKARDAFYACVEKESDKKPTEIASVGLLYPAECKASRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG
        MAVEAD+SGG DEVH+DVL ESRQACYKARDAFYACVEKESDKKPTEIASVGL+YPAECKA RA++VKLCRASWVKHFDRKFCQNSRVQRLLDDKD RRG
Subjt:  MAVEADTSGGLDEVHSDVLEESRQACYKARDAFYACVEKESDKKPTEIASVGLLYPAECKASRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG

Query:  PLILPQPYTFKPTS
        PLILPQPYTFKPT+
Subjt:  PLILPQPYTFKPTS

A0A6J1BZF0 uncharacterized protein LOC111006886

4.8e-55

94.74

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Query:  MAVEADTSGGLDEVHSDVLEESRQACYKARDAFYACVEKESDKKPTEIASVGLLYPAECKASRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG
        MAVEAD SGGLDEVHSDVL  SRQACYKARDAFYACVEKESDKKPTEIASVGL+YPAECKA RAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG
Subjt:  MAVEADTSGGLDEVHSDVLEESRQACYKARDAFYACVEKESDKKPTEIASVGLLYPAECKASRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG

Query:  PLILPQPYTFKPTS
        PL LPQPYTFKPTS
Subjt:  PLILPQPYTFKPTS

A0A6J1EDW1 cytochrome c oxidase assembly factor 6

7.0e-54

92.11

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Query:  MAVEADTSGGLDEVHSDVLEESRQACYKARDAFYACVEKESDKKPTEIASVGLLYPAECKASRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG
        MA E D SGG +EVH+DVL E RQACYKARDAFYACVEKESDKKPTEIASVGLLYPAECKASRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG
Subjt:  MAVEADTSGGLDEVHSDVLEESRQACYKARDAFYACVEKESDKKPTEIASVGLLYPAECKASRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG

Query:  PLILPQPYTFKPTS
        PL+LPQPYTFKPTS
Subjt:  PLILPQPYTFKPTS

A0A6J1I7I2 cytochrome c oxidase assembly factor 6

3.1e-54

92.11

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Query:  MAVEADTSGGLDEVHSDVLEESRQACYKARDAFYACVEKESDKKPTEIASVGLLYPAECKASRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG
        MA+E D SGG +EVH+DVL E RQACYKARDAFYACVEKESDKKPTEIASVGLLYPAECKASRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG
Subjt:  MAVEADTSGGLDEVHSDVLEESRQACYKARDAFYACVEKESDKKPTEIASVGLLYPAECKASRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG

Query:  PLILPQPYTFKPTS
        PL+LPQPYTFKPTS
Subjt:  PLILPQPYTFKPTS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G58005.1 Cytochrome c oxidase, subunit Vib family protein

1.2e-42

68.14

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Query:  MAVEADTSGGLDEVHSDVLEESRQACYKARDAFYACVEKESDKKPTEIASVGLLYPAECKASRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG
        MA++   S   ++VH DVL ++R ACYKARDAFYAC+EKES KKPTEIA+VGLLYP EC  SR +FV  CR+SWVKHFDR++C+N RVQRLLDD D R+G
Subjt:  MAVEADTSGGLDEVHSDVLEESRQACYKARDAFYACVEKESDKKPTEIASVGLLYPAECKASRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG

Query:  PLILPQPYTFKPT
        P+ LPQPYTFKP+
Subjt:  PLILPQPYTFKPT

AT5G58005.2 Cytochrome c oxidase, subunit Vib family protein

1.2e-42

68.14

Show/hide

Query:  MAVEADTSGGLDEVHSDVLEESRQACYKARDAFYACVEKESDKKPTEIASVGLLYPAECKASRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG
        MA++   S   ++VH DVL ++R ACYKARDAFYAC+EKES KKPTEIA+VGLLYP EC  SR +FV  CR+SWVKHFDR++C+N RVQRLLDD D R+G
Subjt:  MAVEADTSGGLDEVHSDVLEESRQACYKARDAFYACVEKESDKKPTEIASVGLLYPAECKASRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG

Query:  PLILPQPYTFKPT
        P+ LPQPYTFKP+
Subjt:  PLILPQPYTFKPT

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGCTGTCGAAGCTGACACGTCTGGAGGCTTGGATGAAGTTCACAGCGACGTTCTAGAGGAATCCAGACAAGCTTGCTACAAGGCTCGCGATGCTTTTTATGCTTGTGT
GGAGAAGGAATCGGACAAAAAGCCCACTGAAATTGCTTCTGTTGGTCTTCTTTACCCCGCCGAGTGTAAAGCCTCGAGGGCTGAGTTTGTCAAACTTTGTAGGGCTTCTT
GGGTGAAGCATTTTGATAGGAAGTTTTGTCAGAACAGTAGGGTTCAAAGACTCTTAGATGACAAAGATTCGAGGAGAGGTCCCTTAATACTTCCGCAGCCTTACACTTTT
AAGCCCACTAGTTGA

mRNA sequence

Show/hide mRNA sequence

AAAAGCCTAACATTCACAGCTGCAGGCTGAAGCAGGCGGGATAAATTGTTTGCGACGACGAAAAACCCCAACTGCGAAAGAAGCCAAGCAACAATAGCAGCTCCGTCTCT
GTAGGAACTATGGCTGTCGAAGCTGACACGTCTGGAGGCTTGGATGAAGTTCACAGCGACGTTCTAGAGGAATCCAGACAAGCTTGCTACAAGGCTCGCGATGCTTTTTA
TGCTTGTGTGGAGAAGGAATCGGACAAAAAGCCCACTGAAATTGCTTCTGTTGGTCTTCTTTACCCCGCCGAGTGTAAAGCCTCGAGGGCTGAGTTTGTCAAACTTTGTA
GGGCTTCTTGGGTGAAGCATTTTGATAGGAAGTTTTGTCAGAACAGTAGGGTTCAAAGACTCTTAGATGACAAAGATTCGAGGAGAGGTCCCTTAATACTTCCGCAGCCT
TACACTTTTAAGCCCACTAGTTGATTGTGGCGGAACAACTTTGGCGGTCAGAGTCTTATGACTATCGTTATTTATTTATTTTTCTTCTCTTACTTTGTATAGAGATGATT
GTGGCAATAGATTTCATAATAATGTCAATCTTCTTACCAACTTACAAAAGCCTATTCCCTTCCTTTGATATATATCAGAGTCTTATGACCATGATGTACTAACTAAACAT
AAGTTACGTAACAAGGCCATAAAAATTTGTGAGTTTGTTATCTAATTTAGTCTTGGTATTGGTAGTTG

Protein sequence

Show/hide protein sequence

MAVEADTSGGLDEVHSDVLEESRQACYKARDAFYACVEKESDKKPTEIASVGLLYPAECKASRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRGPLILPQPYTF
KPTS

Tan0002588 (gene) of Snake gourd v1 genome