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Tan0002619 (gene) of Snake gourd v1 genome

Gene IDTan0002619
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionS-protein homolog
Genome locationLG06:46283330..46283794
RNA-Seq ExpressionTan0002619
SyntenyTan0002619
Gene Ontology termsNA
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8648167.1 hypothetical protein Csa_018435 [Cucumis sativus]4.1e-4257.52Show/hide
Query:  LLLAFLLVASPNLSMVSSKKLPKNTNSKPKLPEPNQPLVSFKHFRVEIHNDLHMFLLDSHCYSKDNDLGLHILFPDEQQNWSFNGNWLDSTNFHCRLD--
        LLL  LL+A    SM  +KK  KN +  PKL  PN P+V F+ F VEIHNDL MF+LDSHCYSKD+DLGLHILFPDE+Q+WSF GNW+ +T+FHCRL+  
Subjt:  LLLAFLLVASPNLSMVSSKKLPKNTNSKPKLPEPNQPLVSFKHFRVEIHNDLHMFLLDSHCYSKDNDLGLHILFPDEQQNWSFNGNWLDSTNFHCRLD--

Query:  -----------NADFLSNHCRDSTCVWSARQDGVYFNNQDGHPVFYDYWELLR
                     DF++N+C + TC+WSARQDGVY NN  G  VFY+YWE++R
Subjt:  -----------NADFLSNHCRDSTCVWSARQDGVYFNNQDGHPVFYDYWELLR

XP_008453055.1 PREDICTED: uncharacterized protein LOC103493877 [Cucumis melo]1.6e-3348.92Show/hide
Query:  MVSSKKLPKNTNSKPKLPEPNQPLVSFKHFRVEIHNDLHMFLLDSHCYSKDNDLGLHILFPDEQQNWSFNGNWLDSTNFHCRLD-------------NAD
        M S+    K+  + P+LP+P++PLV+F  F + I+N+L M+LLDSHCYSKD+DLG  +L+P+++Q+WSF GNWL +TNFHC+L+             +  
Subjt:  MVSSKKLPKNTNSKPKLPEPNQPLVSFKHFRVEIHNDLHMFLLDSHCYSKDNDLGLHILFPDEQQNWSFNGNWLDSTNFHCRLD-------------NAD

Query:  FLSNHCRDSTCVWSARQDGVYFNNQDGHPVFYDYWELLR
        FL+N C  S+C WSARQDGVY  NQ+G  VF   WE++R
Subjt:  FLSNHCRDSTCVWSARQDGVYFNNQDGHPVFYDYWELLR

XP_022933678.1 S-protein homolog 2-like [Cucurbita moschata]7.3e-3953.16Show/hide
Query:  MLLLAFLLVASPNLSMV----SSKKLPKNTNSKPKLPEPNQPLVSFKHFRVEIHNDLHMFLLDSHCYSKDNDLGLHILFPDEQQNWSFNGNWLDSTNFHC
        MLLL  +L+A  + SM+    ++ K+PK   +KPK  +PN P  +F+ F VEIHNDL MF+LD+HC SKD+DLGLHILFPDE+Q+WSF+ NWL +T FHC
Subjt:  MLLLAFLLVASPNLSMV----SSKKLPKNTNSKPKLPEPNQPLVSFKHFRVEIHNDLHMFLLDSHCYSKDNDLGLHILFPDEQQNWSFNGNWLDSTNFHC

Query:  RLD-------------NAD-FLSNHCRDSTCVWSARQDGVYFNNQDGHPVFYDYWELL
        RL+             N D  L ++C ++TC+WSARQDGVY NNQD   VFY+YW++L
Subjt:  RLD-------------NAD-FLSNHCRDSTCVWSARQDGVYFNNQDGHPVFYDYWELL

XP_022942056.1 S-protein homolog 1-like [Cucurbita moschata]3.9e-3246.41Show/hide
Query:  MLLLAFLLVASPNLSMVSSKKLPKNTNSKPKLPEPNQPLVSFKHFRVEIHNDLHMFLLDSHCYSKDNDLGLHILFPDEQQNWSFNGNWLDSTNFHCRL--
        +LLL  L   S  +S+ S KK      + P+ P+PNQP ++ + F V I N L M+LLDSHC SKD+DLG+ +++PD++Q WSF GNWL STNFHC+L  
Subjt:  MLLLAFLLVASPNLSMVSSKKLPKNTNSKPKLPEPNQPLVSFKHFRVEIHNDLHMFLLDSHCYSKDNDLGLHILFPDEQQNWSFNGNWLDSTNFHCRL--

Query:  -----------DNADFLSNHCRDSTCVWSARQDGVYFNNQDGHPVFYDYWELL
                   D+ +F+++ C DS+CVW+A+QDG+Y  +Q+G  VF D+WEL+
Subjt:  -----------DNADFLSNHCRDSTCVWSARQDGVYFNNQDGHPVFYDYWELL

XP_023546843.1 S-protein homolog 1-like [Cucurbita pepo subsp. pepo]9.2e-3447.71Show/hide
Query:  MLLLAFLLVASPNLSMVSSKKLPKNTNSKPKLPEPNQPLVSFKHFRVEIHNDLHMFLLDSHCYSKDNDLGLHILFPDEQQNWSFNGNWLDSTNFHCRL--
        +LLL  L + S  +S+ S KK      + P+ P+PNQP ++ + F V I N L M+LLDSHC SKD+DLG+H+++PD++Q+WSF GNWL STNFHC+L  
Subjt:  MLLLAFLLVASPNLSMVSSKKLPKNTNSKPKLPEPNQPLVSFKHFRVEIHNDLHMFLLDSHCYSKDNDLGLHILFPDEQQNWSFNGNWLDSTNFHCRL--

Query:  -----------DNADFLSNHCRDSTCVWSARQDGVYFNNQDGHPVFYDYWELL
                   D+ +F++  C DS+CVW+A+QDGVY  +Q+G  VF D+WE+L
Subjt:  -----------DNADFLSNHCRDSTCVWSARQDGVYFNNQDGHPVFYDYWELL

TrEMBL top hitse value%identityAlignment
A0A0A0KIQ4 S-protein homolog7.3e-2966.33Show/hide
Query:  LLLAFLLVASPNLSMVSSKKLPKNTNSKPKLPEPNQPLVSFKHFRVEIHNDLHMFLLDSHCYSKDNDLGLHILFPDEQQNWSFNGNWLDSTNFHCRLD
        LLL  LL+ S N+SM   KK  K+   KP LP+PN P+VSF+ FRVEIHNDL+M+LLDS CYSKD++ GLH+LFPDEQQNWSF GNW D+T FHCRL+
Subjt:  LLLAFLLVASPNLSMVSSKKLPKNTNSKPKLPEPNQPLVSFKHFRVEIHNDLHMFLLDSHCYSKDNDLGLHILFPDEQQNWSFNGNWLDSTNFHCRLD

A0A0A0KL79 S-protein homolog1.7e-4158.82Show/hide
Query:  SKKLPKNTNSKPKLPEPNQPLVSFKHFRVEIHNDLHMFLLDSHCYSKDNDLGLHILFPDEQQNWSFNGNWLDSTNFHCRLD-------------NADFLS
        +KK  KN +  PKL  PN P+V F+ F VEIHNDL MF+LDSHCYSKD+DLGLHILFPDE+Q+WSF GNW+ +T+FHCRL+               DF++
Subjt:  SKKLPKNTNSKPKLPEPNQPLVSFKHFRVEIHNDLHMFLLDSHCYSKDNDLGLHILFPDEQQNWSFNGNWLDSTNFHCRLD-------------NADFLS

Query:  NHCRDSTCVWSARQDGVYFNNQDGHPVFYDYWELLR
        N+C + TC+WSARQDGVY NN  G  VFY+YWE++R
Subjt:  NHCRDSTCVWSARQDGVYFNNQDGHPVFYDYWELLR

A0A1S3BUQ9 S-protein homolog7.6e-3448.92Show/hide
Query:  MVSSKKLPKNTNSKPKLPEPNQPLVSFKHFRVEIHNDLHMFLLDSHCYSKDNDLGLHILFPDEQQNWSFNGNWLDSTNFHCRLD-------------NAD
        M S+    K+  + P+LP+P++PLV+F  F + I+N+L M+LLDSHCYSKD+DLG  +L+P+++Q+WSF GNWL +TNFHC+L+             +  
Subjt:  MVSSKKLPKNTNSKPKLPEPNQPLVSFKHFRVEIHNDLHMFLLDSHCYSKDNDLGLHILFPDEQQNWSFNGNWLDSTNFHCRLD-------------NAD

Query:  FLSNHCRDSTCVWSARQDGVYFNNQDGHPVFYDYWELLR
        FL+N C  S+C WSARQDGVY  NQ+G  VF   WE++R
Subjt:  FLSNHCRDSTCVWSARQDGVYFNNQDGHPVFYDYWELLR

A0A6J1F5H5 S-protein homolog3.5e-3953.16Show/hide
Query:  MLLLAFLLVASPNLSMV----SSKKLPKNTNSKPKLPEPNQPLVSFKHFRVEIHNDLHMFLLDSHCYSKDNDLGLHILFPDEQQNWSFNGNWLDSTNFHC
        MLLL  +L+A  + SM+    ++ K+PK   +KPK  +PN P  +F+ F VEIHNDL MF+LD+HC SKD+DLGLHILFPDE+Q+WSF+ NWL +T FHC
Subjt:  MLLLAFLLVASPNLSMV----SSKKLPKNTNSKPKLPEPNQPLVSFKHFRVEIHNDLHMFLLDSHCYSKDNDLGLHILFPDEQQNWSFNGNWLDSTNFHC

Query:  RLD-------------NAD-FLSNHCRDSTCVWSARQDGVYFNNQDGHPVFYDYWELL
        RL+             N D  L ++C ++TC+WSARQDGVY NNQD   VFY+YW++L
Subjt:  RLD-------------NAD-FLSNHCRDSTCVWSARQDGVYFNNQDGHPVFYDYWELL

A0A6J1FMU2 S-protein homolog1.9e-3246.41Show/hide
Query:  MLLLAFLLVASPNLSMVSSKKLPKNTNSKPKLPEPNQPLVSFKHFRVEIHNDLHMFLLDSHCYSKDNDLGLHILFPDEQQNWSFNGNWLDSTNFHCRL--
        +LLL  L   S  +S+ S KK      + P+ P+PNQP ++ + F V I N L M+LLDSHC SKD+DLG+ +++PD++Q WSF GNWL STNFHC+L  
Subjt:  MLLLAFLLVASPNLSMVSSKKLPKNTNSKPKLPEPNQPLVSFKHFRVEIHNDLHMFLLDSHCYSKDNDLGLHILFPDEQQNWSFNGNWLDSTNFHCRL--

Query:  -----------DNADFLSNHCRDSTCVWSARQDGVYFNNQDGHPVFYDYWELL
                   D+ +F+++ C DS+CVW+A+QDG+Y  +Q+G  VF D+WEL+
Subjt:  -----------DNADFLSNHCRDSTCVWSARQDGVYFNNQDGHPVFYDYWELL

SwissProt top hitse value%identityAlignment
F2Q9V4 S-protein homolog 61.3e-0632.38Show/hide
Query:  RVEIHNDLHMFLLDSHCYSKDNDLGLHILFPDEQQNWSFNGNWLDSTNFHCRLDNADFL------------SNHCRDSTCVWSARQDGVYFNNQ--DGHP
        RV I+ND + +LL  HC S+D+D G HIL       W F  N+++ST + C                    S+ CR+  C W A++DG+Y   +    +P
Subjt:  RVEIHNDLHMFLLDSHCYSKDNDLGLHILFPDEQQNWSFNGNWLDSTNFHCRLDNADFL------------SNHCRDSTCVWSARQDGVYFNNQ--DGHP

Query:  VFYDY
        +FY +
Subjt:  VFYDY

F4JLS0 S-protein homolog 13.2e-0533.7Show/hide
Query:  HCYSKDNDLGLHILFPDEQQNWSFNGNWLDSTNFHCRL--DNAD----------FLSNHCRDSTCVWSARQDGVY-FNNQDGHPVFYDYWEL
        HC SK++DLG   L    + +W+F  N L ST F C +  DN             L + C    C+W+A+ DG+Y +N+  G  V    WE+
Subjt:  HCYSKDNDLGLHILFPDEQQNWSFNGNWLDSTNFHCRL--DNAD----------FLSNHCRDSTCVWSARQDGVY-FNNQDGHPVFYDYWEL

P0DN92 S-protein homolog 242.0e-0736.08Show/hide
Query:  RVEIHNDLHMFLLDSHCYSKDNDLGLHILFPDEQQNWSFNGNWLDSTNFHCRLD--------------NADFLSNHCRDSTCVWSARQDGVYFNNQD
        RV I ND + +LL  HC S+D+DLG HIL   E   W F+ N+  ST + C                 N DF     R + C W A +DG+Y  ++D
Subjt:  RVEIHNDLHMFLLDSHCYSKDNDLGLHILFPDEQQNWSFNGNWLDSTNFHCRLD--------------NADFLSNHCRDSTCVWSARQDGVYFNNQD

Q2HQ46 S-protein homolog 743.8e-0634.78Show/hide
Query:  HCYSKDNDLG-LHILFPDEQQNWSFNGNWLDSTNFHCRLDNAD------------FLSNHCRDSTCVWSARQDGVY-FNNQDGHPVFYDYWE
        HC SK+NDLG +++ F D + +W+F  N L ST F C +   D             L + C    CVW+A+ DG+Y +N+  G  V  + W+
Subjt:  HCYSKDNDLG-LHILFPDEQQNWSFNGNWLDSTNFHCRLDNAD------------FLSNHCRDSTCVWSARQDGVY-FNNQDGHPVFYDYWE

Q9FI84 S-protein homolog 271.1e-0533.33Show/hide
Query:  RVEIHNDLHMFLLDSHCYSKDNDLGLHILFPDEQQNWSFNGNWLDSTNFHC------------RLDNADFLSNHCRDSTCVWSARQDGVY
        R+ + N+ + +LL  HC SKD+DLG HI    E   W F+ N+ +ST + C             +D A+     CR+  C W+A++D +Y
Subjt:  RVEIHNDLHMFLLDSHCYSKDNDLGLHILFPDEQQNWSFNGNWLDSTNFHC------------RLDNADFLSNHCRDSTCVWSARQDGVY

Arabidopsis top hitse value%identityAlignment
AT4G16195.1 Plant self-incompatibility protein S1 family3.9e-0631.86Show/hide
Query:  KPKLPEPNQPLVSFKHF-----RVEIHNDL-HMFLLDSHCYSKDNDLGLHILFPDEQQNWSFNGNWLDSTNFHCRLD------NADFLSNH--------C
        K  +P PN P  +   F      VEI+NDL +   L  HC SKD+DLG   L P E  ++SF   +   T + C         + D   +H        C
Subjt:  KPKLPEPNQPLVSFKHF-----RVEIHNDL-HMFLLDSHCYSKDNDLGLHILFPDEQQNWSFNGNWLDSTNFHCRLD------NADFLSNH--------C

Query:  RDSTCVWSARQDG
            CVW  R++G
Subjt:  RDSTCVWSARQDG

AT4G16295.1 S-protein homologue 12.3e-0633.7Show/hide
Query:  HCYSKDNDLGLHILFPDEQQNWSFNGNWLDSTNFHCRL--DNAD----------FLSNHCRDSTCVWSARQDGVY-FNNQDGHPVFYDYWEL
        HC SK++DLG   L    + +W+F  N L ST F C +  DN             L + C    C+W+A+ DG+Y +N+  G  V    WE+
Subjt:  HCYSKDNDLGLHILFPDEQQNWSFNGNWLDSTNFHCRL--DNAD----------FLSNHCRDSTCVWSARQDGVY-FNNQDGHPVFYDYWEL

AT4G29035.1 Plant self-incompatibility protein S1 family2.7e-0734.78Show/hide
Query:  HCYSKDNDLG-LHILFPDEQQNWSFNGNWLDSTNFHCRLDNAD------------FLSNHCRDSTCVWSARQDGVY-FNNQDGHPVFYDYWE
        HC SK+NDLG +++ F D + +W+F  N L ST F C +   D             L + C    CVW+A+ DG+Y +N+  G  V  + W+
Subjt:  HCYSKDNDLG-LHILFPDEQQNWSFNGNWLDSTNFHCRLDNAD------------FLSNHCRDSTCVWSARQDGVY-FNNQDGHPVFYDYWE

AT5G04350.1 Plant self-incompatibility protein S1 family5.8e-1035.35Show/hide
Query:  RVEIHNDL-HMFLLDSHCYSKDNDLGLHILFPDEQQNWSFNGNWLDSTNFHCRLDNADFLSNH------------CRDSTCVWSARQDGVYFNNQDGHP
        +V + N L H  LL  HC SKD+DLG HIL   +   ++F  N   +T+F C++D      +H              +++C W  R+DG+YF +QDG P
Subjt:  RVEIHNDL-HMFLLDSHCYSKDNDLGLHILFPDEQQNWSFNGNWLDSTNFHCRLDNADFLSNH------------CRDSTCVWSARQDGVYFNNQDGHP

AT5G06020.1 Plant self-incompatibility protein S1 family7.8e-0733.33Show/hide
Query:  RVEIHNDLHMFLLDSHCYSKDNDLGLHILFPDEQQNWSFNGNWLDSTNFHC------------RLDNADFLSNHCRDSTCVWSARQDGVY
        R+ + N+ + +LL  HC SKD+DLG HI    E   W F+ N+ +ST + C             +D A+     CR+  C W+A++D +Y
Subjt:  RVEIHNDLHMFLLDSHCYSKDNDLGLHILFPDEQQNWSFNGNWLDSTNFHC------------RLDNADFLSNHCRDSTCVWSARQDGVY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTATTACTAGCATTCTTGCTCGTCGCCTCCCCTAACTTGTCCATGGTTTCAAGCAAGAAGCTCCCAAAAAACACAAACTCAAAGCCCAAACTACCAGAACCAAACCA
ACCTCTCGTCTCCTTCAAACATTTTCGTGTAGAGATTCACAATGACTTGCATATGTTCTTATTGGATAGTCATTGTTACTCAAAAGACAATGATTTAGGGTTGCATATAT
TGTTCCCAGATGAGCAACAAAATTGGTCGTTTAATGGGAATTGGCTTGACTCTACGAATTTTCATTGTAGGTTGGACAATGCTGACTTTTTAAGCAACCATTGTCGCGAC
TCAACCTGCGTTTGGAGTGCGAGACAAGATGGGGTTTATTTTAACAATCAAGATGGCCACCCTGTTTTTTATGATTATTGGGAACTGCTTAGATAG
mRNA sequenceShow/hide mRNA sequence
ATGTTATTACTAGCATTCTTGCTCGTCGCCTCCCCTAACTTGTCCATGGTTTCAAGCAAGAAGCTCCCAAAAAACACAAACTCAAAGCCCAAACTACCAGAACCAAACCA
ACCTCTCGTCTCCTTCAAACATTTTCGTGTAGAGATTCACAATGACTTGCATATGTTCTTATTGGATAGTCATTGTTACTCAAAAGACAATGATTTAGGGTTGCATATAT
TGTTCCCAGATGAGCAACAAAATTGGTCGTTTAATGGGAATTGGCTTGACTCTACGAATTTTCATTGTAGGTTGGACAATGCTGACTTTTTAAGCAACCATTGTCGCGAC
TCAACCTGCGTTTGGAGTGCGAGACAAGATGGGGTTTATTTTAACAATCAAGATGGCCACCCTGTTTTTTATGATTATTGGGAACTGCTTAGATAG
Protein sequenceShow/hide protein sequence
MLLLAFLLVASPNLSMVSSKKLPKNTNSKPKLPEPNQPLVSFKHFRVEIHNDLHMFLLDSHCYSKDNDLGLHILFPDEQQNWSFNGNWLDSTNFHCRLDNADFLSNHCRD
STCVWSARQDGVYFNNQDGHPVFYDYWELLR