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Tan0002662 (gene) of Snake gourd v1 genome

Gene IDTan0002662
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionProtein FAR1-RELATED SEQUENCE
Genome locationLG09:8132581..8134805
RNA-Seq ExpressionTan0002662
SyntenyTan0002662
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
GO:0016740 - transferase activity (molecular function)
InterPro domainsIPR031052 - FHY3/FAR1 family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAD1840595.1 unnamed protein product [Ananas comosus var. bracteatus]2.8e-1939.75Show/hide
Query:  FEPFGILCRHALRVLITKNVDMIPSQYILSRWTKMAKKGMLEVSPMKSTMDQKEIKALRRNEMMRDAYKMVIVGAETSIGAKIVKEKISEALYLLEQETH
        FE  G+LCRH+LRVL+  NV+ IP+QYIL RWTK AKK ++  +   S  D+K  +ALR +E+    + +   G+ T  G KIVK+K+ E L LLE+   
Subjt:  FEPFGILCRHALRVLITKNVDMIPSQYILSRWTKMAKKGMLEVSPMKSTMDQKEIKALRRNEMMRDAYKMVIVGAETSIGAKIVKEKISEALYLLEQETH

Query:  HMKMKDVDLNQHTKNNV---PHELSSEFHKAHVLDPSFIRPMGVSNARLKSNIEKSKKKKK
         +   +    +   N+     ++  S      VLDP  +R  G++NAR+KS +EK  K+KK
Subjt:  HMKMKDVDLNQHTKNNV---PHELSSEFHKAHVLDPSFIRPMGVSNARLKSNIEKSKKKKK

CAD1844716.1 unnamed protein product [Ananas comosus var. bracteatus]2.8e-1939.75Show/hide
Query:  FEPFGILCRHALRVLITKNVDMIPSQYILSRWTKMAKKGMLEVSPMKSTMDQKEIKALRRNEMMRDAYKMVIVGAETSIGAKIVKEKISEALYLLEQETH
        FE  G+LCRH+LRVL+  NV+ IP+QYIL RWTK AKK ++  +   S  D+K  +ALR +E+    + +   G+ T  G KIVK+K+ E L LLE+   
Subjt:  FEPFGILCRHALRVLITKNVDMIPSQYILSRWTKMAKKGMLEVSPMKSTMDQKEIKALRRNEMMRDAYKMVIVGAETSIGAKIVKEKISEALYLLEQETH

Query:  HMKMKDVDLNQHTKNNV---PHELSSEFHKAHVLDPSFIRPMGVSNARLKSNIEKSKKKKK
         +   +    +   N+     ++  S      VLDP  +R  G++NAR+KS +EK  K+KK
Subjt:  HMKMKDVDLNQHTKNNV---PHELSSEFHKAHVLDPSFIRPMGVSNARLKSNIEKSKKKKK

XP_020089395.1 protein FAR1-RELATED SEQUENCE 5-like [Ananas comosus]2.1e-1939.51Show/hide
Query:  FEPFGILCRHALRVLITKNVDMIPSQYILSRWTKMAKKGMLEVSPMKSTMDQKEIKALRRNEMMRDAYKMVIVGAETSIGAKIVKEKISEALYLLEQETH
        FE  G+LCRH+LRVL+  NV+ IP+QYIL RWTK AKK ++  +   S  D+K  +ALR +E+    + +   G+ T  G KIVK+K+ E L LLE+   
Subjt:  FEPFGILCRHALRVLITKNVDMIPSQYILSRWTKMAKKGMLEVSPMKSTMDQKEIKALRRNEMMRDAYKMVIVGAETSIGAKIVKEKISEALYLLEQETH

Query:  HMKMKDVDLNQHTKNNV---PHELSSEFHKAHVLDPSFIRPMGVSNARLKSNIEKSKKKKKI
         +   +    +   N+     ++  S      VLDP  +R  G++NAR+KS +EK  K+KK+
Subjt:  HMKMKDVDLNQHTKNNV---PHELSSEFHKAHVLDPSFIRPMGVSNARLKSNIEKSKKKKKI

XP_021802166.1 protein FAR1-RELATED SEQUENCE 5-like [Prunus avium]1.0e-2144.25Show/hide
Query:  FEPFGILCRHALRVLITKNVDMIPSQYILSRWTKMAKKGMLEVSPMKS-TMDQKEIKALRRNEMMRDAYKMVIVGAETSIGAKIVKEKISEALYLLEQET
        FE  G+LCRHALRVL  K V  IPSQYIL RWTK AKKG       +S  +  K    LRRN +MR AY ++  GAET    +I  +K+ E   L+E+  
Subjt:  FEPFGILCRHALRVLITKNVDMIPSQYILSRWTKMAKKGMLEVSPMKS-TMDQKEIKALRRNEMMRDAYKMVIVGAETSIGAKIVKEKISEALYLLEQET

Query:  HHMKMKDVDLNQHTKNNV--------PHELSSEFHKAHVLDPSFIRPMGVSNARLKSNIEKSKKKKKIVSSEKI
        + +K K V  +    N V         H +S  + +  VLDPS +RP G+SNARLK + EK KKK  +  S+KI
Subjt:  HHMKMKDVDLNQHTKNNV--------PHELSSEFHKAHVLDPSFIRPMGVSNARLKSNIEKSKKKKKIVSSEKI

XP_030932929.1 protein FAR1-RELATED SEQUENCE 5-like [Quercus lobata]2.8e-1940.11Show/hide
Query:  FEPFGILCRHALRVLITKNVDMIPSQYILSRWTKMAKKGMLEVSPMKSTMDQKEIKAL-RRNEMMRDAYKMVIVGAETSIGAKIVKEKISEALYLLEQET
        FE  G+LCRHALR+LI KNV  +P QYIL RWTK AKK  +     KS     E+    RRNE+MR  Y+     A T+   ++ K KI E +  +E++ 
Subjt:  FEPFGILCRHALRVLITKNVDMIPSQYILSRWTKMAKKGMLEVSPMKSTMDQKEIKAL-RRNEMMRDAYKMVIVGAETSIGAKIVKEKISEALYLLEQET

Query:  HHMKMKDVDLNQHTKNN--VPHELSSEFHKAH-------VLDPSFIRPMGVSNARLKSNIEKSKKK--KKIVSSEKI
          M+M     +   K N  V + +S +  K +       +LDP  +RP GV+NAR+KSN+EK K+K  K I  S+++
Subjt:  HHMKMKDVDLNQHTKNN--VPHELSSEFHKAH-------VLDPSFIRPMGVSNARLKSNIEKSKKK--KKIVSSEKI

TrEMBL top hitse value%identityAlignment
A0A6J5XRM5 Protein FAR1-RELATED SEQUENCE1.8e-1940.62Show/hide
Query:  FEPFGILCRHALRVLITKNVDMIPSQYILSRWTKMAKKGMLEVSPMKSTMDQK--EIKALRRNEMMRDAYKMVIVGAETSIGAKIVKEKISEALYLLEQE
        FE  G+LCRHAL+VL +KN+  IPSQYIL RWTK AKKG++  S +  + ++K    ++LR +E+M +A  +V V +    G ++VK+K++E + LLE +
Subjt:  FEPFGILCRHALRVLITKNVDMIPSQYILSRWTKMAKKGMLEVSPMKSTMDQK--EIKALRRNEMMRDAYKMVIVGAETSIGAKIVKEKISEALYLLEQE

Query:  THHMKMKDVDLNQHTKNNVPHELSSEFHKAHVLDPSFIRPMGVSNARLKSNIEKSKKKKK
            + K+ +LN      +   L +   K  VL+P  IR  G++NAR+KS +EK ++K+K
Subjt:  THHMKMKDVDLNQHTKNNVPHELSSEFHKAHVLDPSFIRPMGVSNARLKSNIEKSKKKKK

A0A6P5F7Z4 Protein FAR1-RELATED SEQUENCE1.0e-1939.51Show/hide
Query:  FEPFGILCRHALRVLITKNVDMIPSQYILSRWTKMAKKGMLEVSPMKSTMDQKEIKALRRNEMMRDAYKMVIVGAETSIGAKIVKEKISEALYLLEQETH
        FE  G+LCRH+LRVL+  NV+ IP+QYIL RWTK AKK ++  +   S  D+K  +ALR +E+    + +   G+ T  G KIVK+K+ E L LLE+   
Subjt:  FEPFGILCRHALRVLITKNVDMIPSQYILSRWTKMAKKGMLEVSPMKSTMDQKEIKALRRNEMMRDAYKMVIVGAETSIGAKIVKEKISEALYLLEQETH

Query:  HMKMKDVDLNQHTKNNV---PHELSSEFHKAHVLDPSFIRPMGVSNARLKSNIEKSKKKKKI
         +   +    +   N+     ++  S      VLDP  +R  G++NAR+KS +EK  K+KK+
Subjt:  HMKMKDVDLNQHTKNNV---PHELSSEFHKAHVLDPSFIRPMGVSNARLKSNIEKSKKKKKI

A0A6P5RMH9 Protein FAR1-RELATED SEQUENCE4.9e-2244.25Show/hide
Query:  FEPFGILCRHALRVLITKNVDMIPSQYILSRWTKMAKKGMLEVSPMKS-TMDQKEIKALRRNEMMRDAYKMVIVGAETSIGAKIVKEKISEALYLLEQET
        FE  G+LCRHALRVL  K V  IPSQYIL RWTK AKKG       +S  +  K    LRRN +MR AY ++  GAET    +I  +K+ E   L+E+  
Subjt:  FEPFGILCRHALRVLITKNVDMIPSQYILSRWTKMAKKGMLEVSPMKS-TMDQKEIKALRRNEMMRDAYKMVIVGAETSIGAKIVKEKISEALYLLEQET

Query:  HHMKMKDVDLNQHTKNNV--------PHELSSEFHKAHVLDPSFIRPMGVSNARLKSNIEKSKKKKKIVSSEKI
        + +K K V  +    N V         H +S  + +  VLDPS +RP G+SNARLK + EK KKK  +  S+KI
Subjt:  HHMKMKDVDLNQHTKNNV--------PHELSSEFHKAHVLDPSFIRPMGVSNARLKSNIEKSKKKKKIVSSEKI

A0A6V7QCN2 Protein FAR1-RELATED SEQUENCE1.3e-1939.75Show/hide
Query:  FEPFGILCRHALRVLITKNVDMIPSQYILSRWTKMAKKGMLEVSPMKSTMDQKEIKALRRNEMMRDAYKMVIVGAETSIGAKIVKEKISEALYLLEQETH
        FE  G+LCRH+LRVL+  NV+ IP+QYIL RWTK AKK ++  +   S  D+K  +ALR +E+    + +   G+ T  G KIVK+K+ E L LLE+   
Subjt:  FEPFGILCRHALRVLITKNVDMIPSQYILSRWTKMAKKGMLEVSPMKSTMDQKEIKALRRNEMMRDAYKMVIVGAETSIGAKIVKEKISEALYLLEQETH

Query:  HMKMKDVDLNQHTKNNV---PHELSSEFHKAHVLDPSFIRPMGVSNARLKSNIEKSKKKKK
         +   +    +   N+     ++  S      VLDP  +R  G++NAR+KS +EK  K+KK
Subjt:  HMKMKDVDLNQHTKNNV---PHELSSEFHKAHVLDPSFIRPMGVSNARLKSNIEKSKKKKK

A0A6V7QPK6 Serine O-acetyltransferase1.3e-1939.75Show/hide
Query:  FEPFGILCRHALRVLITKNVDMIPSQYILSRWTKMAKKGMLEVSPMKSTMDQKEIKALRRNEMMRDAYKMVIVGAETSIGAKIVKEKISEALYLLEQETH
        FE  G+LCRH+LRVL+  NV+ IP+QYIL RWTK AKK ++  +   S  D+K  +ALR +E+    + +   G+ T  G KIVK+K+ E L LLE+   
Subjt:  FEPFGILCRHALRVLITKNVDMIPSQYILSRWTKMAKKGMLEVSPMKSTMDQKEIKALRRNEMMRDAYKMVIVGAETSIGAKIVKEKISEALYLLEQETH

Query:  HMKMKDVDLNQHTKNNV---PHELSSEFHKAHVLDPSFIRPMGVSNARLKSNIEKSKKKKK
         +   +    +   N+     ++  S      VLDP  +R  G++NAR+KS +EK  K+KK
Subjt:  HMKMKDVDLNQHTKNNV---PHELSSEFHKAHVLDPSFIRPMGVSNARLKSNIEKSKKKKK

SwissProt top hitse value%identityAlignment
Q3E7I5 Protein FAR1-RELATED SEQUENCE 121.8e-0535.56Show/hide
Query:  FEPFGILCRHALRVLITKNVDMIPSQYILSRWTKMAKKGMLEVSPMKSTMDQKEIKALRRNEMMRDAYKMVIVGAETSIGAKIVKEKISE
        FE  G+LCRH L+V    ++  +PS+YIL RWTK A+ G   V  M+S +  +++KAL    +   A K +  G  +    K+  E + E
Subjt:  FEPFGILCRHALRVLITKNVDMIPSQYILSRWTKMAKKGMLEVSPMKSTMDQKEIKALRRNEMMRDAYKMVIVGAETSIGAKIVKEKISE

Q9LIE5 Protein FAR-RED ELONGATED HYPOCOTYL 31.4e-0542.86Show/hide
Query:  FEPFGILCRHALRVLITKNVDMIPSQYILSRWTKMAKKGMLEVSPMKSTMDQKEIKALRRNEMMRDAYKM
        FE  G LCRH L VL   ++  IPSQYIL RWTK AK       P      Q + + LR N++   A K+
Subjt:  FEPFGILCRHALRVLITKNVDMIPSQYILSRWTKMAKKGMLEVSPMKSTMDQKEIKALRRNEMMRDAYKM

Q9M8J3 Protein FAR1-RELATED SEQUENCE 76.9e-0534.44Show/hide
Query:  FEPFGILCRHALRVLITKNVDMIPSQYILSRWTKMAKKGMLEVSPMKSTMDQKEIKALRRNEMMRDAYKMVIVGAETSIGAKIVKEKISE
        FE  G+LCRH L+V    ++  +PS+YIL RWTK A+ G   V  ++S +  +++KAL    +   A K +  G  +    K+  E + E
Subjt:  FEPFGILCRHALRVLITKNVDMIPSQYILSRWTKMAKKGMLEVSPMKSTMDQKEIKALRRNEMMRDAYKMVIVGAETSIGAKIVKEKISE

Q9SZL7 Protein FAR1-RELATED SEQUENCE 97.3e-0739.56Show/hide
Query:  FEPFGILCRHALRVLITKNVDMIPSQYILSRWTKMAKKGMLEVSPMKSTMDQKEIKALRRNEMMRDAYKMVIVGAETSIGAKIVKEKISEA
        FE  GI+CRH L V   KNV  +PS+Y+L RWTK AK    E  P  S   Q+ +  L  N + ++A K V  GA++    K+  + + EA
Subjt:  FEPFGILCRHALRVLITKNVDMIPSQYILSRWTKMAKKGMLEVSPMKSTMDQKEIKALRRNEMMRDAYKMVIVGAETSIGAKIVKEKISEA

Q9ZVC9 Protein FAR1-RELATED SEQUENCE 36.9e-0536.67Show/hide
Query:  FEPFGILCRHALRVLITKNVDMIPSQYILSRWTKMAKKGMLEVSPMKSTMDQKEIKALRRNEMMRDAYKMVIVGAETSIGAKIVKEKISE
        FE  GILCRH L V    N+  +P  YIL RWT+ A K M+E+    S  +  +    R N + R+A K    GA T+    I   ++ E
Subjt:  FEPFGILCRHALRVLITKNVDMIPSQYILSRWTKMAKKGMLEVSPMKSTMDQKEIKALRRNEMMRDAYKMVIVGAETSIGAKIVKEKISE

Arabidopsis top hitse value%identityAlignment
AT2G27110.1 FAR1-related sequence 34.9e-0636.67Show/hide
Query:  FEPFGILCRHALRVLITKNVDMIPSQYILSRWTKMAKKGMLEVSPMKSTMDQKEIKALRRNEMMRDAYKMVIVGAETSIGAKIVKEKISE
        FE  GILCRH L V    N+  +P  YIL RWT+ A K M+E+    S  +  +    R N + R+A K    GA T+    I   ++ E
Subjt:  FEPFGILCRHALRVLITKNVDMIPSQYILSRWTKMAKKGMLEVSPMKSTMDQKEIKALRRNEMMRDAYKMVIVGAETSIGAKIVKEKISE

AT3G22170.1 far-red elongated hypocotyls 39.8e-0742.86Show/hide
Query:  FEPFGILCRHALRVLITKNVDMIPSQYILSRWTKMAKKGMLEVSPMKSTMDQKEIKALRRNEMMRDAYKM
        FE  G LCRH L VL   ++  IPSQYIL RWTK AK       P      Q + + LR N++   A K+
Subjt:  FEPFGILCRHALRVLITKNVDMIPSQYILSRWTKMAKKGMLEVSPMKSTMDQKEIKALRRNEMMRDAYKM

AT3G22170.2 far-red elongated hypocotyls 39.8e-0742.86Show/hide
Query:  FEPFGILCRHALRVLITKNVDMIPSQYILSRWTKMAKKGMLEVSPMKSTMDQKEIKALRRNEMMRDAYKM
        FE  G LCRH L VL   ++  IPSQYIL RWTK AK       P      Q + + LR N++   A K+
Subjt:  FEPFGILCRHALRVLITKNVDMIPSQYILSRWTKMAKKGMLEVSPMKSTMDQKEIKALRRNEMMRDAYKM

AT4G38170.1 FAR1-related sequence 95.2e-0839.56Show/hide
Query:  FEPFGILCRHALRVLITKNVDMIPSQYILSRWTKMAKKGMLEVSPMKSTMDQKEIKALRRNEMMRDAYKMVIVGAETSIGAKIVKEKISEA
        FE  GI+CRH L V   KNV  +PS+Y+L RWTK AK    E  P  S   Q+ +  L  N + ++A K V  GA++    K+  + + EA
Subjt:  FEPFGILCRHALRVLITKNVDMIPSQYILSRWTKMAKKGMLEVSPMKSTMDQKEIKALRRNEMMRDAYKMVIVGAETSIGAKIVKEKISEA

AT5G18960.1 FAR1-related sequence 121.3e-0635.56Show/hide
Query:  FEPFGILCRHALRVLITKNVDMIPSQYILSRWTKMAKKGMLEVSPMKSTMDQKEIKALRRNEMMRDAYKMVIVGAETSIGAKIVKEKISE
        FE  G+LCRH L+V    ++  +PS+YIL RWTK A+ G   V  M+S +  +++KAL    +   A K +  G  +    K+  E + E
Subjt:  FEPFGILCRHALRVLITKNVDMIPSQYILSRWTKMAKKGMLEVSPMKSTMDQKEIKALRRNEMMRDAYKMVIVGAETSIGAKIVKEKISE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAAGAAGACAAATATGATATCGGCAAGTTTGAACCATTTGGCATTTTATGTCGACATGCACTAAGAGTATTAATAACAAAGAATGTAGATATGATACCTTCTCA
ATATATCTTGTCAAGATGGACTAAAATGGCAAAAAAAGGAATGCTAGAAGTAAGTCCTATGAAGTCAACAATGGACCAAAAAGAAATTAAGGCATTACGGCGTAATGAGA
TGATGCGTGATGCTTATAAAATGGTTATAGTTGGAGCAGAGACATCTATAGGTGCTAAAATTGTGAAGGAAAAAATCTCAGAAGCACTGTATCTCCTTGAACAAGAAACA
CATCATATGAAAATGAAAGATGTTGATCTCAACCAACACACTAAAAATAACGTACCCCATGAATTATCTTCTGAATTTCATAAGGCACATGTATTGGATCCTTCATTTAT
AAGGCCAATGGGAGTATCAAATGCAAGATTGAAAAGCAATATAGAAAAGAGTAAGAAGAAGAAGAAGATTGTGTCTAGTGAAAAAATAATAGGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGGAAGAAGACAAATATGATATCGGCAAGTTTGAACCATTTGGCATTTTATGTCGACATGCACTAAGAGTATTAATAACAAAGAATGTAGATATGATACCTTCTCA
ATATATCTTGTCAAGATGGACTAAAATGGCAAAAAAAGGAATGCTAGAAGTAAGTCCTATGAAGTCAACAATGGACCAAAAAGAAATTAAGGCATTACGGCGTAATGAGA
TGATGCGTGATGCTTATAAAATGGTTATAGTTGGAGCAGAGACATCTATAGGTGCTAAAATTGTGAAGGAAAAAATCTCAGAAGCACTGTATCTCCTTGAACAAGAAACA
CATCATATGAAAATGAAAGATGTTGATCTCAACCAACACACTAAAAATAACGTACCCCATGAATTATCTTCTGAATTTCATAAGGCACATGTATTGGATCCTTCATTTAT
AAGGCCAATGGGAGTATCAAATGCAAGATTGAAAAGCAATATAGAAAAGAGTAAGAAGAAGAAGAAGATTGTGTCTAGTGAAAAAATAATAGGTTAG
Protein sequenceShow/hide protein sequence
MEEEDKYDIGKFEPFGILCRHALRVLITKNVDMIPSQYILSRWTKMAKKGMLEVSPMKSTMDQKEIKALRRNEMMRDAYKMVIVGAETSIGAKIVKEKISEALYLLEQET
HHMKMKDVDLNQHTKNNVPHELSSEFHKAHVLDPSFIRPMGVSNARLKSNIEKSKKKKKIVSSEKIIG