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Tan0002669 (gene) of Snake gourd v1 genome

Gene IDTan0002669
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG07:2779412..2782855
RNA-Seq ExpressionTan0002669
SyntenyTan0002669
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011651546.1 uncharacterized protein LOC105434913 [Cucumis sativus]1.5e-3650.23Show/hide
Query:  MGCGISKFDPKEVVEATSK-SSHN--PPHSSKS--STSNCFTGESK-------LPLDHHQQVALDRTSRKPHEEKLSTVNVKRREA---------VEIKD
        MGCGIS+FDPKEVVEAT+  S+HN  P HS+    STSNCFTGESK        P    +  + DR +    +      NVK+ E+         + ++ 
Subjt:  MGCGISKFDPKEVVEATSK-SSHN--PPHSSKS--STSNCFTGESK-------LPLDHHQQVALDRTSRKPHEEKLSTVNVKRREA---------VEIKD

Query:  RRMPSTGTRIEFEDDCSNNDDVE-DDQNGREICRGGSPSFREYCIDSDSRSRSVRSEDDSEGDPCKWSNERSLNPEKEKGLEGETGKKERRGRGIRKVLR
        R    T T+I+ +DD S+++D + +DQN REICRGGSPSFREYC+DS+SRSRS+ SEDD EGD CKW+        KEKG++ E GKKERRG+G+R  L+
Subjt:  RRMPSTGTRIEFEDDCSNNDDVE-DDQNGREICRGGSPSFREYCIDSDSRSRSVRSEDDSEGDPCKWSNERSLNPEKEKGLEGETGKKERRGRGIRKVLR

Query:  RG-KSGGVRNLLSPSRR
        RG  SGGV+NLL+ S R
Subjt:  RG-KSGGVRNLLSPSRR

XP_022935240.1 uncharacterized protein LOC111442180 isoform X1 [Cucurbita moschata]4.3e-3656.04Show/hide
Query:  MGCGISKFDPKEVVEATSKSSHNPPHSSKSSTSNCFTGESKLPLDHHQQVALDRTSRKPH---------EEKL--STVNVKRREAVEIKDRRMPSTGTRI
        MGCGISKF+PKEVVEAT+   HNPP S KSST+NCFT E K  +   +  + ++ SRK +          EK+   +VNVK RE VE  DR+M  T T+I
Subjt:  MGCGISKFDPKEVVEATSKSSHNPPHSSKSSTSNCFTGESKLPLDHHQQVALDRTSRKPH---------EEKL--STVNVKRREAVEIKDRRMPSTGTRI

Query:  EFEDDCSNNDDVEDDQNGREICRGGSPSFREYCIDSDSRSRSVRSEDDSEGDPCKWSNERSLNPEKEKGLEGETGKKERRGRGIRKVLRRGKSGGVRNLL
         FED         DDQN R+I RGGSPSFREYCI S SRSRS+ SED+ EGD   W NER+L+ EKEK  E    KKE RG+G RK LRRGKSG  R+LL
Subjt:  EFEDDCSNNDDVEDDQNGREICRGGSPSFREYCIDSDSRSRSVRSEDDSEGDPCKWSNERSLNPEKEKGLEGETGKKERRGRGIRKVLRRGKSGGVRNLL

Query:  SPSR-RH
        S SR RH
Subjt:  SPSR-RH

XP_022935241.1 uncharacterized protein LOC111442180 isoform X2 [Cucurbita moschata]1.6e-3555.56Show/hide
Query:  MGCGISKFDPKEVVEATSKSSHNPPHSSKSSTSNCFTGESKLPLDHHQQVALDRTSRKPH---------EEKL--STVNVKRREAVEIKDRRMPSTGTRI
        MGCGISKF+PKEVVEAT+   HNPP S KSST+NCFT E K  +   +  + ++ SRK +          EK+   +VNVK RE VE  DR+M  T T+I
Subjt:  MGCGISKFDPKEVVEATSKSSHNPPHSSKSSTSNCFTGESKLPLDHHQQVALDRTSRKPH---------EEKL--STVNVKRREAVEIKDRRMPSTGTRI

Query:  EFEDDCSNNDDVEDDQNGREICRGGSPSFREYCIDSDSRSRSVRSEDDSEGDPCKWSNERSLNPEKEKGLEGETGKKERRGRGIRKVLRRGKSGGVRNLL
         FED         DDQN R+I RGGSPSFREYCI S SRSRS+ SED+ EGD   W NER+L+ EKEK       KKE RG+G RK LRRGKSG  R+LL
Subjt:  EFEDDCSNNDDVEDDQNGREICRGGSPSFREYCIDSDSRSRSVRSEDDSEGDPCKWSNERSLNPEKEKGLEGETGKKERRGRGIRKVLRRGKSGGVRNLL

Query:  SPSR-RH
        S SR RH
Subjt:  SPSR-RH

XP_023529002.1 uncharacterized protein LOC111791764 [Cucurbita pepo subsp. pepo]1.7e-3756.52Show/hide
Query:  MGCGISKFDPKEVVEATSKSSHNPPHSSKSSTSNCFTGESKLPLDHHQQVALDRTSRKPH---------EEKL--STVNVKRREAVEIKDRRMPSTGTRI
        MGCGISKF+PKEVVEAT+   HNPP S KSST+NCFTGE K  +   +    ++ SRK +          EK+   +VNVK RE VE  DR+M  T T+I
Subjt:  MGCGISKFDPKEVVEATSKSSHNPPHSSKSSTSNCFTGESKLPLDHHQQVALDRTSRKPH---------EEKL--STVNVKRREAVEIKDRRMPSTGTRI

Query:  EFEDDCSNNDDVEDDQNGREICRGGSPSFREYCIDSDSRSRSVRSEDDSEGDPCKWSNERSLNPEKEKGLEGETGKKERRGRGIRKVLRRGKSGGVRNLL
         FED         DDQN R+I RGGSPSFREYCI S SRSRS+ SED+ +GD   W NER+LN EKEK  E    KKERRG+G +K LRRGKSG  R+LL
Subjt:  EFEDDCSNNDDVEDDQNGREICRGGSPSFREYCIDSDSRSRSVRSEDDSEGDPCKWSNERSLNPEKEKGLEGETGKKERRGRGIRKVLRRGKSGGVRNLL

Query:  SPSR-RH
        S SR RH
Subjt:  SPSR-RH

XP_038877410.1 uncharacterized protein LOC120069699 [Benincasa hispida]6.2e-5160.48Show/hide
Query:  MGCGISKFDPKEVVEATSKSSHNPPHSSKS---STSNCFTGESKLPLDHHQQVAL-DRTSR--KPHEEKL--STVNVKRREAVEIKDRRMPSTGTRIEFE
        MGCGIS+ DPKEVVEAT+  SHNPPH +     STSNCFTGESK  +  H   ++ DR+S   +  EEK+    ++VKR E+ E+ +    + GTR +FE
Subjt:  MGCGISKFDPKEVVEATSKSSHNPPHSSKS---STSNCFTGESKLPLDHHQQVAL-DRTSR--KPHEEKL--STVNVKRREAVEIKDRRMPSTGTRIEFE

Query:  DDCSNNDDVE-DDQNGREICRGGSPSFREYCIDSDSRSRSVRSEDDSEGDPCKW-SNERSLNPEKEKGLEGETGKKERRGRGIRKVLRRGKSGGVRNLLS
        DDCS+ DD + +D NGREICRGGSPSFREYCIDS+SRSRS+ SEDD EGD CKW  +ER LN EKEKG E E GKKER+G+GIRK L+RGKSGGV+N LS
Subjt:  DDCSNNDDVE-DDQNGREICRGGSPSFREYCIDSDSRSRSVRSEDDSEGDPCKW-SNERSLNPEKEKGLEGETGKKERRGRGIRKVLRRGKSGGVRNLLS

Query:  PSRRHDSTQK
         SRR    Q+
Subjt:  PSRRHDSTQK

TrEMBL top hitse value%identityAlignment
A0A0A0L883 Uncharacterized protein7.2e-3750.23Show/hide
Query:  MGCGISKFDPKEVVEATSK-SSHN--PPHSSKS--STSNCFTGESK-------LPLDHHQQVALDRTSRKPHEEKLSTVNVKRREA---------VEIKD
        MGCGIS+FDPKEVVEAT+  S+HN  P HS+    STSNCFTGESK        P    +  + DR +    +      NVK+ E+         + ++ 
Subjt:  MGCGISKFDPKEVVEATSK-SSHN--PPHSSKS--STSNCFTGESK-------LPLDHHQQVALDRTSRKPHEEKLSTVNVKRREA---------VEIKD

Query:  RRMPSTGTRIEFEDDCSNNDDVE-DDQNGREICRGGSPSFREYCIDSDSRSRSVRSEDDSEGDPCKWSNERSLNPEKEKGLEGETGKKERRGRGIRKVLR
        R    T T+I+ +DD S+++D + +DQN REICRGGSPSFREYC+DS+SRSRS+ SEDD EGD CKW+        KEKG++ E GKKERRG+G+R  L+
Subjt:  RRMPSTGTRIEFEDDCSNNDDVE-DDQNGREICRGGSPSFREYCIDSDSRSRSVRSEDDSEGDPCKWSNERSLNPEKEKGLEGETGKKERRGRGIRKVLR

Query:  RG-KSGGVRNLLSPSRR
        RG  SGGV+NLL+ S R
Subjt:  RG-KSGGVRNLLSPSRR

A0A6J1F405 uncharacterized protein LOC111442180 isoform X27.9e-3655.56Show/hide
Query:  MGCGISKFDPKEVVEATSKSSHNPPHSSKSSTSNCFTGESKLPLDHHQQVALDRTSRKPH---------EEKL--STVNVKRREAVEIKDRRMPSTGTRI
        MGCGISKF+PKEVVEAT+   HNPP S KSST+NCFT E K  +   +  + ++ SRK +          EK+   +VNVK RE VE  DR+M  T T+I
Subjt:  MGCGISKFDPKEVVEATSKSSHNPPHSSKSSTSNCFTGESKLPLDHHQQVALDRTSRKPH---------EEKL--STVNVKRREAVEIKDRRMPSTGTRI

Query:  EFEDDCSNNDDVEDDQNGREICRGGSPSFREYCIDSDSRSRSVRSEDDSEGDPCKWSNERSLNPEKEKGLEGETGKKERRGRGIRKVLRRGKSGGVRNLL
         FED         DDQN R+I RGGSPSFREYCI S SRSRS+ SED+ EGD   W NER+L+ EKEK       KKE RG+G RK LRRGKSG  R+LL
Subjt:  EFEDDCSNNDDVEDDQNGREICRGGSPSFREYCIDSDSRSRSVRSEDDSEGDPCKWSNERSLNPEKEKGLEGETGKKERRGRGIRKVLRRGKSGGVRNLL

Query:  SPSR-RH
        S SR RH
Subjt:  SPSR-RH

A0A6J1FA30 uncharacterized protein LOC111442180 isoform X12.1e-3656.04Show/hide
Query:  MGCGISKFDPKEVVEATSKSSHNPPHSSKSSTSNCFTGESKLPLDHHQQVALDRTSRKPH---------EEKL--STVNVKRREAVEIKDRRMPSTGTRI
        MGCGISKF+PKEVVEAT+   HNPP S KSST+NCFT E K  +   +  + ++ SRK +          EK+   +VNVK RE VE  DR+M  T T+I
Subjt:  MGCGISKFDPKEVVEATSKSSHNPPHSSKSSTSNCFTGESKLPLDHHQQVALDRTSRKPH---------EEKL--STVNVKRREAVEIKDRRMPSTGTRI

Query:  EFEDDCSNNDDVEDDQNGREICRGGSPSFREYCIDSDSRSRSVRSEDDSEGDPCKWSNERSLNPEKEKGLEGETGKKERRGRGIRKVLRRGKSGGVRNLL
         FED         DDQN R+I RGGSPSFREYCI S SRSRS+ SED+ EGD   W NER+L+ EKEK  E    KKE RG+G RK LRRGKSG  R+LL
Subjt:  EFEDDCSNNDDVEDDQNGREICRGGSPSFREYCIDSDSRSRSVRSEDDSEGDPCKWSNERSLNPEKEKGLEGETGKKERRGRGIRKVLRRGKSGGVRNLL

Query:  SPSR-RH
        S SR RH
Subjt:  SPSR-RH

A0A6J1J2G0 uncharacterized protein LOC111482081 isoform X23.9e-3556.1Show/hide
Query:  MGCGISKFDPKEVVEATSKSSHNPPHSSKSSTSNCFTGESKLPL-----DHHQQVALDRTS--RKPHEEKL--STVNVKRREAVEIKDRRMPSTGTRIEF
        MGCGISKF+PKEVVEA +   HNPP S KSST+NCFT E K  +        Q    D +S  R+   EK+   +VNVK RE VE  DR+M  T T+I F
Subjt:  MGCGISKFDPKEVVEATSKSSHNPPHSSKSSTSNCFTGESKLPL-----DHHQQVALDRTS--RKPHEEKL--STVNVKRREAVEIKDRRMPSTGTRIEF

Query:  EDDCSNNDDVEDDQNGREICRGGSPSFREYCIDSDSRSRSVRSEDDSEGDPCKWSNERSLNPEKEKGLEGETGKKERRGRGIRKVLRRGKSGGVRNLLSP
        ED         DDQN R+I RGGSPSFREYCI S SRSRS+ SED+ EGD   W NER+LN EKEK       KKERRG+G +K L RGKSG  R LLS 
Subjt:  EDDCSNNDDVEDDQNGREICRGGSPSFREYCIDSDSRSRSVRSEDDSEGDPCKWSNERSLNPEKEKGLEGETGKKERRGRGIRKVLRRGKSGGVRNLLSP

Query:  SR-RH
        SR RH
Subjt:  SR-RH

A0A6J1J600 uncharacterized protein LOC111482081 isoform X11.0e-3556.59Show/hide
Query:  MGCGISKFDPKEVVEATSKSSHNPPHSSKSSTSNCFTGESKLPL-----DHHQQVALDRTS--RKPHEEKL--STVNVKRREAVEIKDRRMPSTGTRIEF
        MGCGISKF+PKEVVEA +   HNPP S KSST+NCFT E K  +        Q    D +S  R+   EK+   +VNVK RE VE  DR+M  T T+I F
Subjt:  MGCGISKFDPKEVVEATSKSSHNPPHSSKSSTSNCFTGESKLPL-----DHHQQVALDRTS--RKPHEEKL--STVNVKRREAVEIKDRRMPSTGTRIEF

Query:  EDDCSNNDDVEDDQNGREICRGGSPSFREYCIDSDSRSRSVRSEDDSEGDPCKWSNERSLNPEKEKGLEGETGKKERRGRGIRKVLRRGKSGGVRNLLSP
        ED         DDQN R+I RGGSPSFREYCI S SRSRS+ SED+ EGD   W NER+LN EKEK  E    KKERRG+G +K L RGKSG  R LLS 
Subjt:  EDDCSNNDDVEDDQNGREICRGGSPSFREYCIDSDSRSRSVRSEDDSEGDPCKWSNERSLNPEKEKGLEGETGKKERRGRGIRKVLRRGKSGGVRNLLSP

Query:  SR-RH
        SR RH
Subjt:  SR-RH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAGAATTCAATGGCAATGGACAAAAATCAGAGAATTACCAAAACGCTCCATTATTTCCCCGTCGCTTCCTTCGACGCCTCTCGATGGGTTGTGGCATCTCAAAGTT
CGACCCGAAGGAGGTAGTCGAAGCAACCAGTAAATCCTCTCATAATCCTCCTCATTCCTCCAAGTCCTCCACCTCCAATTGTTTCACCGGTGAATCCAAGCTCCCTTTGG
ATCATCATCAACAAGTTGCACTTGATCGCACGTCCCGAAAGCCCCACGAGGAGAAGCTATCGACCGTTAATGTCAAGCGACGAGAAGCGGTGGAGATCAAGGATCGTAGG
ATGCCATCTACTGGGACTCGGATAGAGTTTGAAGATGATTGTAGTAACAACGACGATGTTGAGGATGATCAAAATGGTCGTGAGATTTGTCGAGGAGGGTCGCCGAGTTT
CCGAGAGTATTGTATTGACTCTGACTCGAGATCGAGAAGTGTGCGAAGCGAAGATGACAGTGAAGGAGATCCGTGCAAGTGGTCAAATGAACGATCGCTAAATCCAGAAA
AGGAAAAGGGATTAGAGGGTGAAACGGGGAAAAAAGAGCGAAGAGGAAGAGGCATAAGGAAAGTATTACGGCGCGGTAAATCAGGTGGAGTGAGGAACCTTTTAAGCCCT
TCACGTCGTCATGACAGTACTCAGAAACTACTCGCCAAAGCCTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTAGAATTCAATGGCAATGGACAAAAATCAGAGAATTACCAAAACGCTCCATTATTTCCCCGTCGCTTCCTTCGACGCCTCTCGATGGGTTGTGGCATCTCAAAGTT
CGACCCGAAGGAGGTAGTCGAAGCAACCAGTAAATCCTCTCATAATCCTCCTCATTCCTCCAAGTCCTCCACCTCCAATTGTTTCACCGGTGAATCCAAGCTCCCTTTGG
ATCATCATCAACAAGTTGCACTTGATCGCACGTCCCGAAAGCCCCACGAGGAGAAGCTATCGACCGTTAATGTCAAGCGACGAGAAGCGGTGGAGATCAAGGATCGTAGG
ATGCCATCTACTGGGACTCGGATAGAGTTTGAAGATGATTGTAGTAACAACGACGATGTTGAGGATGATCAAAATGGTCGTGAGATTTGTCGAGGAGGGTCGCCGAGTTT
CCGAGAGTATTGTATTGACTCTGACTCGAGATCGAGAAGTGTGCGAAGCGAAGATGACAGTGAAGGAGATCCGTGCAAGTGGTCAAATGAACGATCGCTAAATCCAGAAA
AGGAAAAGGGATTAGAGGGTGAAACGGGGAAAAAAGAGCGAAGAGGAAGAGGCATAAGGAAAGTATTACGGCGCGGTAAATCAGGTGGAGTGAGGAACCTTTTAAGCCCT
TCACGTCGTCATGACAGTACTCAGAAACTACTCGCCAAAGCCTCTTGA
Protein sequenceShow/hide protein sequence
MLEFNGNGQKSENYQNAPLFPRRFLRRLSMGCGISKFDPKEVVEATSKSSHNPPHSSKSSTSNCFTGESKLPLDHHQQVALDRTSRKPHEEKLSTVNVKRREAVEIKDRR
MPSTGTRIEFEDDCSNNDDVEDDQNGREICRGGSPSFREYCIDSDSRSRSVRSEDDSEGDPCKWSNERSLNPEKEKGLEGETGKKERRGRGIRKVLRRGKSGGVRNLLSP
SRRHDSTQKLLAKAS