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Tan0002672 (gene) of Snake gourd v1 genome

Gene IDTan0002672
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUbiquitin
Genome locationLG02:96012839..96013351
RNA-Seq ExpressionTan0002672
SyntenyTan0002672
Gene Ontology termsGO:0006396 - RNA processing (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3970385.1 hypothetical protein CMV_005914 [Castanea mollissima]6.4e-1056.58Show/hide
Query:  MKRASIDSRKSAIVHGDSKDKVKFQNLLLDFLEVQKEFVSKKRKLQVLKQRKETLEDEVGFLRRRHIHLQKLQNRK
        MKR S+DS +S  + G  + KVK+Q+LL D+LE+QKEFVSKK+K+Q +K  +E L  EV FLR+RH HL KLQ+ K
Subjt:  MKRASIDSRKSAIVHGDSKDKVKFQNLLLDFLEVQKEFVSKKRKLQVLKQRKETLEDEVGFLRRRHIHLQKLQNRK

XP_022132126.1 uncharacterized protein LOC111005070 [Momordica charantia]1.6e-2171.28Show/hide
Query:  MKRASIDSRKSAIVHGDSKDKVKFQNLLLDFLEVQKEFVSKKRKLQVLKQRKETLEDEVGFLRRRHIHLQKLQNRKHG--LENFPMVLEKKQNV
        MKRASI SRKSAIVH +S+ + K+Q LL DFLEVQK+FVSKKRKLQVL+QRKETL  EV FLR+R  +LQKLQNRKH    E+ PMVLE KQN+
Subjt:  MKRASIDSRKSAIVHGDSKDKVKFQNLLLDFLEVQKEFVSKKRKLQVLKQRKETLEDEVGFLRRRHIHLQKLQNRKHG--LENFPMVLEKKQNV

XP_030951238.1 uncharacterized protein LOC115974838 [Quercus lobata]4.9e-1057.89Show/hide
Query:  MKRASIDSRKSAIVHGDSKDKVKFQNLLLDFLEVQKEFVSKKRKLQVLKQRKETLEDEVGFLRRRHIHLQKLQNRK
        MKR S+DS +S  + G  + KVK+QNLL D+LE+QKEFVSKK+K Q +K  +E L  EV FLR+RH HL KLQ+ K
Subjt:  MKRASIDSRKSAIVHGDSKDKVKFQNLLLDFLEVQKEFVSKKRKLQVLKQRKETLEDEVGFLRRRHIHLQKLQNRK

XP_038884216.1 uncharacterized protein LOC120075114 isoform X1 [Benincasa hispida]1.7e-1578.12Show/hide
Query:  LDFLEVQKEFVSKKRKLQVLKQRKETLEDEVGFLRRRHIHLQKLQNRKHGLENFPMVLEKKQNV
        L  LE+QKE VSK RKL+VLKQRKETLEDEVGFLRRR  +LQKLQNR H LEN PMVLE KQN+
Subjt:  LDFLEVQKEFVSKKRKLQVLKQRKETLEDEVGFLRRRHIHLQKLQNRKHGLENFPMVLEKKQNV

XP_038884217.1 uncharacterized protein LOC120075114 isoform X2 [Benincasa hispida]1.7e-1578.12Show/hide
Query:  LDFLEVQKEFVSKKRKLQVLKQRKETLEDEVGFLRRRHIHLQKLQNRKHGLENFPMVLEKKQNV
        L  LE+QKE VSK RKL+VLKQRKETLEDEVGFLRRR  +LQKLQNR H LEN PMVLE KQN+
Subjt:  LDFLEVQKEFVSKKRKLQVLKQRKETLEDEVGFLRRRHIHLQKLQNRKHGLENFPMVLEKKQNV

TrEMBL top hitse value%identityAlignment
A0A1R3GU14 Uncharacterized protein1.5e-0950.62Show/hide
Query:  MKRASIDSRKS-AIVHGDSKDKVKFQNLLLDFLEVQKEFVSKKRKLQVLKQRKETLEDEVGFLRRRHIHLQKLQNRKHGLE
        MKRASI+SR+    V  ++K ++K QNLL +FLE+QKEFV KK+KLQ +KQ++ETL  EV FLR+R+ +L  ++++++ +E
Subjt:  MKRASIDSRKS-AIVHGDSKDKVKFQNLLLDFLEVQKEFVSKKRKLQVLKQRKETLEDEVGFLRRRHIHLQKLQNRKHGLE

A0A1R3J7E0 Ubiquitin6.9e-1051.85Show/hide
Query:  MKRASIDSRKS-AIVHGDSKDKVKFQNLLLDFLEVQKEFVSKKRKLQVLKQRKETLEDEVGFLRRRHIHLQKLQNRKHGLE
        MKRASI+SR+    V  ++K ++K QNLL +FLE+QKEFV KKRKLQ +KQ++ETL  EV FLR+R+ +L  ++++++ +E
Subjt:  MKRASIDSRKS-AIVHGDSKDKVKFQNLLLDFLEVQKEFVSKKRKLQVLKQRKETLEDEVGFLRRRHIHLQKLQNRKHGLE

A0A371FDZ5 Uncharacterized protein (Fragment)9.0e-1055.26Show/hide
Query:  MKRASIDSRKSAIVHGDSKDKVKFQNLLLDFLEVQKEFVSKKRKLQVLKQRKETLEDEVGFLRRRHIHLQKLQNRK
        MKR  ++SRKS     D+K   K+ +LL ++ E+QKEFVSKKRKLQV KQ+++ L D+V FLR RH +L KLQN K
Subjt:  MKRASIDSRKSAIVHGDSKDKVKFQNLLLDFLEVQKEFVSKKRKLQVLKQRKETLEDEVGFLRRRHIHLQKLQNRK

A0A6J1BRD5 uncharacterized protein LOC1110050707.8e-2271.28Show/hide
Query:  MKRASIDSRKSAIVHGDSKDKVKFQNLLLDFLEVQKEFVSKKRKLQVLKQRKETLEDEVGFLRRRHIHLQKLQNRKHG--LENFPMVLEKKQNV
        MKRASI SRKSAIVH +S+ + K+Q LL DFLEVQK+FVSKKRKLQVL+QRKETL  EV FLR+R  +LQKLQNRKH    E+ PMVLE KQN+
Subjt:  MKRASIDSRKSAIVHGDSKDKVKFQNLLLDFLEVQKEFVSKKRKLQVLKQRKETLEDEVGFLRRRHIHLQKLQNRKHG--LENFPMVLEKKQNV

A0A7N2KTS1 Uncharacterized protein2.4e-1057.89Show/hide
Query:  MKRASIDSRKSAIVHGDSKDKVKFQNLLLDFLEVQKEFVSKKRKLQVLKQRKETLEDEVGFLRRRHIHLQKLQNRK
        MKR S+DS +S  + G  + KVK+QNLL D+LE+QKEFVSKK+K Q +K  +E L  EV FLR+RH HL KLQ+ K
Subjt:  MKRASIDSRKSAIVHGDSKDKVKFQNLLLDFLEVQKEFVSKKRKLQVLKQRKETLEDEVGFLRRRHIHLQKLQNRK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G30630.1 unknown protein9.5e-0434.07Show/hide
Query:  MKRASIDSRKSAIVHGDSKDKVKFQNLLLDFLEVQKEFVSKKRKLQVLKQRKETLEDEVGFLRRRHIHLQKLQNRKHGLENFPMVLEKKQN
        MK+ +  S  S    GD   ++ F    +  LE++KE   K+++L+++KQ++ TL+ EV FLRRR+ HL++ Q     LE  P +L   ++
Subjt:  MKRASIDSRKSAIVHGDSKDKVKFQNLLLDFLEVQKEFVSKKRKLQVLKQRKETLEDEVGFLRRRHIHLQKLQNRKHGLENFPMVLEKKQN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAGAGCGTCGATCGATTCTCGAAAATCCGCCATTGTTCACGGAGACTCCAAGGATAAGGTTAAATTTCAAAATCTGCTGCTAGATTTCTTGGAAGTTCAGAAGGA
ATTTGTCTCGAAGAAGAGAAAATTGCAGGTTCTAAAACAGAGGAAGGAGACTCTTGAAGATGAAGTTGGGTTTTTGAGACGAAGGCACATACATTTGCAGAAACTGCAGA
ATCGTAAACATGGTTTAGAAAACTTTCCCATGGTTTTGGAAAAGAAGCAGAATGTGGTAAGCAAATTGGTATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAGAGCGTCGATCGATTCTCGAAAATCCGCCATTGTTCACGGAGACTCCAAGGATAAGGTTAAATTTCAAAATCTGCTGCTAGATTTCTTGGAAGTTCAGAAGGA
ATTTGTCTCGAAGAAGAGAAAATTGCAGGTTCTAAAACAGAGGAAGGAGACTCTTGAAGATGAAGTTGGGTTTTTGAGACGAAGGCACATACATTTGCAGAAACTGCAGA
ATCGTAAACATGGTTTAGAAAACTTTCCCATGGTTTTGGAAAAGAAGCAGAATGTGGTAAGCAAATTGGTATGAATTTTTTCTTTTTCTATAATGGATTGATGAAGAAAT
TTTAATGGAG
Protein sequenceShow/hide protein sequence
MKRASIDSRKSAIVHGDSKDKVKFQNLLLDFLEVQKEFVSKKRKLQVLKQRKETLEDEVGFLRRRHIHLQKLQNRKHGLENFPMVLEKKQNVVSKLV