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Tan0002692 (gene) of Snake gourd v1 genome

Gene IDTan0002692
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG05:5316441..5316692
RNA-Seq ExpressionTan0002692
SyntenyTan0002692
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN80674.1 hypothetical protein VITISV_002981 [Vitis vinifera]4.5e-0462.5Show/hide
Query:  GDVTLVSSGGLFLLSVILLSISLISMVIFACG--SSGDPQKKK---------DGGGGGCGGGGCGGGGGCGGGGCGGCGG
        G + LVSSGGLFLL +I +++S+ISMVIFAC   +SG  +KKK          GGG GCGGGGCGGGGGCG GG GGCGG
Subjt:  GDVTLVSSGGLFLLSVILLSISLISMVIFACG--SSGDPQKKK---------DGGGGGCGGGGCGGGGGCGGGGCGGCGG

DAD43550.1 TPA_asm: hypothetical protein HUJ06_001780 [Nelumbo nucifera]6.2e-0661.04Show/hide
Query:  MARQILAAAAGGGFGDVTLVSSGGLFLLSVILLSISLISMVIFACGSSGDPQKKKDG-GGGGCGGGGCGGGGGCGGG
        M R I A +AG   G+  + +SGGLFLL  ++ S+S+ISMVIFACG SG  +  KDG GGGGCGGGGC  GGGCGGG
Subjt:  MARQILAAAAGGGFGDVTLVSSGGLFLLSVILLSISLISMVIFACGSSGDPQKKKDG-GGGGCGGGGCGGGGGCGGG

KAG6603228.1 hypothetical protein SDJN03_03837, partial [Cucurbita argyrosperma subsp. sororia]5.1e-0869.05Show/hide
Query:  LAAAAGGGFGDVTLVSSGGLFLLSVILLSISLISMVIFACG-SSGDPQKKKDGGG-GGCGGGGC----GGGGGCGGGGCGGCGG
        + AA GGG GDVTL SSGGL LL+ +LLS+SL+SM+IFACG SS D ++K++GGG GG GGGGC    GGGGGCGGGG GGCGG
Subjt:  LAAAAGGGFGDVTLVSSGGLFLLSVILLSISLISMVIFACG-SSGDPQKKKDGGG-GGCGGGGC----GGGGGCGGGGCGGCGG

KAG6603229.1 hypothetical protein SDJN03_03838, partial [Cucurbita argyrosperma subsp. sororia]3.2e-1067.61Show/hide
Query:  LAAAAGGGFGDVTLVSSGGLFLLSVILLSISLISMVIFACGSSGDPQKKK---DGGGGGCGGGGCGGGGGC
        + AA GGG GDVTL SSGGL LL+ IL+S+SL+SM+IFACG S    K+K    GGG GCGGGGCGGGGGC
Subjt:  LAAAAGGGFGDVTLVSSGGLFLLSVILLSISLISMVIFACGSSGDPQKKK---DGGGGGCGGGGCGGGGGC

KAG6604774.1 hypothetical protein SDJN03_02091, partial [Cucurbita argyrosperma subsp. sororia]1.8e-1378.57Show/hide
Query:  MARQILAAA-AGGGFGDVTLVSSGGLFLLSVILLSISLISMVIFACGSSGDPQKKKDGGGGGCGGGGCGGGGGCGGGGCGGCGG
        M R ILAAA  GGGF DVTLVSSGGLFLLS ILLSISL+SM+IFACG+S DP++K   GGGGCGGG  GGGGGC GGGCGGCGG
Subjt:  MARQILAAA-AGGGFGDVTLVSSGGLFLLSVILLSISLISMVIFACGSSGDPQKKKDGGGGGCGGGGCGGGGGCGGGGCGGCGG

TrEMBL top hitse value%identityAlignment
A0A061DKB8 Uncharacterized protein4.8e-0451.76Show/hide
Query:  MARQILAAAAGGGFGDVTLVSSGGLFLLSVILLSISLISMVIFACG--SSGDPQKKKDGGGGGCGGGGCGGGGGCGGGGCGGCGG
        MAR+++     G  G+  +  SGGLFLL +I+ S+S+ISMVIFACG  +SG P+     GGGGC         GCGGGGCGGCGG
Subjt:  MARQILAAAAGGGFGDVTLVSSGGLFLLSVILLSISLISMVIFACG--SSGDPQKKKDGGGGGCGGGGCGGGGGCGGGGCGGCGG

A0A540MXA9 Uncharacterized protein6.3e-0463.16Show/hide
Query:  GGGFGDVTLV----SSGGLFLLSVILLSISLISMVIFACG-SSGDPQKKKDGGGGGCGGGGCGGGGGCGGGGCGGC
        GG  G+V ++    +SGGL LL +IL+S+SLISMVIFACG SSG P+ +  GGG G GGGGCGGGGG GG G GGC
Subjt:  GGGFGDVTLV----SSGGLFLLSVILLSISLISMVIFACG-SSGDPQKKKDGGGGGCGGGGCGGGGGCGGGGCGGC

A5B1D1 Uncharacterized protein2.2e-0462.5Show/hide
Query:  GDVTLVSSGGLFLLSVILLSISLISMVIFACG--SSGDPQKKK---------DGGGGGCGGGGCGGGGGCGGGGCGGCGG
        G + LVSSGGLFLL +I +++S+ISMVIFAC   +SG  +KKK          GGG GCGGGGCGGGGGCG GG GGCGG
Subjt:  GDVTLVSSGGLFLLSVILLSISLISMVIFACG--SSGDPQKKK---------DGGGGGCGGGGCGGGGGCGGGGCGGCGG

F6GYM8 Uncharacterized protein8.2e-0457.65Show/hide
Query:  MARQILAAAAGGGFGDVTLVSSGGLFLLSVILLSISLISMVIFACGSSGD---PQKKKDGGGGGCGGGGCGGGGGCG-GGGCGGC
        MAR +L A  GGG   +   SSG LFLL ++++S+S++SMVIFACG S     P+K++ GGGGG  GGGCGGGGG G GGG GGC
Subjt:  MARQILAAAAGGGFGDVTLVSSGGLFLLSVILLSISLISMVIFACGSSGD---PQKKKDGGGGGCGGGGCGGGGGCG-GGGCGGC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAGGCAAATTCTTGCTGCTGCCGCCGGCGGCGGCTTCGGAGATGTCACCTTGGTGAGCTCCGGCGGGCTATTTTTGCTTTCGGTCATCCTCCTATCCATTTCTCT
CATATCAATGGTCATATTTGCTTGCGGCAGCTCCGGTGACCCTCAAAAGAAAAAAGATGGTGGCGGCGGAGGCTGCGGTGGTGGTGGCTGCGGTGGCGGTGGGGGTTGTG
GTGGTGGTGGATGTGGTGGCTGTGGAGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAGGCAAATTCTTGCTGCTGCCGCCGGCGGCGGCTTCGGAGATGTCACCTTGGTGAGCTCCGGCGGGCTATTTTTGCTTTCGGTCATCCTCCTATCCATTTCTCT
CATATCAATGGTCATATTTGCTTGCGGCAGCTCCGGTGACCCTCAAAAGAAAAAAGATGGTGGCGGCGGAGGCTGCGGTGGTGGTGGCTGCGGTGGCGGTGGGGGTTGTG
GTGGTGGTGGATGTGGTGGCTGTGGAGGTTGA
Protein sequenceShow/hide protein sequence
MARQILAAAAGGGFGDVTLVSSGGLFLLSVILLSISLISMVIFACGSSGDPQKKKDGGGGGCGGGGCGGGGGCGGGGCGGCGG