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Tan0002708 (gene) of Snake gourd v1 genome

Gene IDTan0002708
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG01:10625573..10626328
RNA-Seq ExpressionTan0002708
SyntenyTan0002708
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600517.1 hypothetical protein SDJN03_05750, partial [Cucurbita argyrosperma subsp. sororia]2.2e-2565.22Show/hide
Query:  MGNCVEVLSRRREEEEARAGAATTREEKGEKK-GRMRIKVVLTKEELQWLMEQIKERGGKGLEELLEEIERGRKKVVNYCIEEEDEDDVNNNNNGYWRPS
        MGNCVEVLSRR EEEE      TT  EK E+K G +RIKVVLTKEELQWLMEQ++ERGGKGLEELL EIE  RKKV               N +G WRPS
Subjt:  MGNCVEVLSRRREEEEARAGAATTREEKGEKK-GRMRIKVVLTKEELQWLMEQIKERGGKGLEELLEEIERGRKKVVNYCIEEEDEDDVNNNNNGYWRPS

Query:  LESIMECPEVPDQMQ
        LESIME PEVPD+M+
Subjt:  LESIMECPEVPDQMQ

KAG7031156.1 hypothetical protein SDJN02_05196, partial [Cucurbita argyrosperma subsp. argyrosperma]3.2e-2464.35Show/hide
Query:  MGNCVEVLSRRREEEEARAGAATTREEKGEKK-GRMRIKVVLTKEELQWLMEQIKERGGKGLEELLEEIERGRKKVVNYCIEEEDEDDVNNNNNGYWRPS
        MGNCVEVLSRR EEEE      TT  EK E+K G +RIKVVLTKEELQWLMEQ++ERGGKGLEELL EIE  RKKV               N +G WRPS
Subjt:  MGNCVEVLSRRREEEEARAGAATTREEKGEKK-GRMRIKVVLTKEELQWLMEQIKERGGKGLEELLEEIERGRKKVVNYCIEEEDEDDVNNNNNGYWRPS

Query:  LESIMECPEVPDQMQ
        LESIME PEV D+M+
Subjt:  LESIMECPEVPDQMQ

KGN53406.1 hypothetical protein Csa_015211 [Cucumis sativus]1.1e-2462.39Show/hide
Query:  MGNCVEVLSRRREEEEARAGAATTREEKGEKKGRMRIKVVLTKEELQWLMEQIKERGGKGLEELLEEIERGR--KKVVNYCIEEEDEDDVNNNNNGYWRP
        MGNCVEVLSR+REE+      +T   E+ EKKG MRIKVVL KEEL+WL EQIKE+GGK LEELLEEIERGR  K V+N  I+           N  W+P
Subjt:  MGNCVEVLSRRREEEEARAGAATTREEKGEKKGRMRIKVVLTKEELQWLMEQIKERGGKGLEELLEEIERGR--KKVVNYCIEEEDEDDVNNNNNGYWRP

Query:  SLESIMECPEVPDQMQR
        SLESIMECPE+PD M R
Subjt:  SLESIMECPEVPDQMQR

XP_022942038.1 uncharacterized protein LOC111447226 [Cucurbita moschata]2.8e-2869.03Show/hide
Query:  MGNCVEVLSRRREEEEARAGAATTREEKGEKKGRMRIKVVLTKEELQWLMEQIKERGGKGLEELLEEIERGRKKVVNYCIEEEDEDDVNNNNNGYWRPSL
        MGNCVEVLSRRREEEE    A TT  EK E+KGR+RIKVVLTKEELQWLMEQ++ERGGKGLEELL EIE  RKKV               N +G WRPSL
Subjt:  MGNCVEVLSRRREEEEARAGAATTREEKGEKKGRMRIKVVLTKEELQWLMEQIKERGGKGLEELLEEIERGRKKVVNYCIEEEDEDDVNNNNNGYWRPSL

Query:  ESIMECPEVPDQM
        ESIME PEVPD+M
Subjt:  ESIMECPEVPDQM

XP_023543788.1 uncharacterized protein LOC111803552 [Cucurbita pepo subsp. pepo]5.2e-2767.54Show/hide
Query:  MGNCVEVLSRRREEEEARAGAATTREEKGEKKGRMRIKVVLTKEELQWLMEQIKERGGKGLEELLEEIERGRKKVVNYCIEEEDEDDVNNNNNGYWRPSL
        MGNCVEVLSRRREEE       TT  EK E+KG +RIKVVLTKEELQWLMEQ++ERGGKGLEELL EIER R+KV        DED       G WRPSL
Subjt:  MGNCVEVLSRRREEEEARAGAATTREEKGEKKGRMRIKVVLTKEELQWLMEQIKERGGKGLEELLEEIERGRKKVVNYCIEEEDEDDVNNNNNGYWRPSL

Query:  ESIMECPEVPDQMQ
        ESIME PEVPD+M+
Subjt:  ESIMECPEVPDQMQ

TrEMBL top hitse value%identityAlignment
A0A0A0KZU9 Uncharacterized protein5.2e-2562.39Show/hide
Query:  MGNCVEVLSRRREEEEARAGAATTREEKGEKKGRMRIKVVLTKEELQWLMEQIKERGGKGLEELLEEIERGR--KKVVNYCIEEEDEDDVNNNNNGYWRP
        MGNCVEVLSR+REE+      +T   E+ EKKG MRIKVVL KEEL+WL EQIKE+GGK LEELLEEIERGR  K V+N  I+           N  W+P
Subjt:  MGNCVEVLSRRREEEEARAGAATTREEKGEKKGRMRIKVVLTKEELQWLMEQIKERGGKGLEELLEEIERGR--KKVVNYCIEEEDEDDVNNNNNGYWRP

Query:  SLESIMECPEVPDQMQR
        SLESIMECPE+PD M R
Subjt:  SLESIMECPEVPDQMQR

A0A5E4GAQ3 Uncharacterized protein2.4e-1446.03Show/hide
Query:  MGNCVEVLSRRR-----------EEEEARAGAATTREEKGEKKGRMRIKVVLTKEELQWLMEQIKERGGKGLEELLEEIERGRKKVVNYCIEEEDEDDVN
        MGNCVE  + R+           E+EE +      +E    K G +R+K+VLTKEEL+WLM Q+K+RGGK LE++LEEI+R R KV      EE      
Subjt:  MGNCVEVLSRRR-----------EEEEARAGAATTREEKGEKKGRMRIKVVLTKEELQWLMEQIKERGGKGLEELLEEIERGRKKVVNYCIEEEDEDDVN

Query:  NNNNGYWRPSLESIMECPEVPDQMQR
              W+PSLESIMECPEV ++M R
Subjt:  NNNNGYWRPSLESIMECPEVPDQMQR

A0A6J1C443 uncharacterized protein LOC1110083083.3e-1954.62Show/hide
Query:  MGNCVEVLSRRREEEEARAGAATTREEKGEKKGRMRIKVVLTKEELQWLMEQIKERGGKGLEELLEE--IERGR--KKVVNYCIEEEDEDDVNNNNNGYW
        MGNCVE + +  E  E         EEK E KG MRIKVVLTKEEL+WLME I ERGG+ LE+LLEE  IERGR  +KV++        + ++ N +  W
Subjt:  MGNCVEVLSRRREEEEARAGAATTREEKGEKKGRMRIKVVLTKEELQWLMEQIKERGGKGLEELLEE--IERGR--KKVVNYCIEEEDEDDVNNNNNGYW

Query:  RPSLESIMECPEVPDQMQR
        +PSLESI+ECPE+PD MQR
Subjt:  RPSLESIMECPEVPDQMQR

A0A6J1FTR3 uncharacterized protein LOC1114472261.3e-2869.03Show/hide
Query:  MGNCVEVLSRRREEEEARAGAATTREEKGEKKGRMRIKVVLTKEELQWLMEQIKERGGKGLEELLEEIERGRKKVVNYCIEEEDEDDVNNNNNGYWRPSL
        MGNCVEVLSRRREEEE    A TT  EK E+KGR+RIKVVLTKEELQWLMEQ++ERGGKGLEELL EIE  RKKV               N +G WRPSL
Subjt:  MGNCVEVLSRRREEEEARAGAATTREEKGEKKGRMRIKVVLTKEELQWLMEQIKERGGKGLEELLEEIERGRKKVVNYCIEEEDEDDVNNNNNGYWRPSL

Query:  ESIMECPEVPDQM
        ESIME PEVPD+M
Subjt:  ESIMECPEVPDQM

A0A6J5UXI2 Uncharacterized protein2.4e-1446.03Show/hide
Query:  MGNCVEVLSRRR-----------EEEEARAGAATTREEKGEKKGRMRIKVVLTKEELQWLMEQIKERGGKGLEELLEEIERGRKKVVNYCIEEEDEDDVN
        MGNCVE  + R+           E+EE +      +E    K G +R+K+VLTKEEL+WLM Q+K+RGGK LE++LEEI+R R KV      EE      
Subjt:  MGNCVEVLSRRR-----------EEEEARAGAATTREEKGEKKGRMRIKVVLTKEELQWLMEQIKERGGKGLEELLEEIERGRKKVVNYCIEEEDEDDVN

Query:  NNNNGYWRPSLESIMECPEVPDQMQR
              W+PSLESIMECPEV ++M R
Subjt:  NNNNGYWRPSLESIMECPEVPDQMQR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCAATTGCGTGGAAGTGTTATCGAGGCGGCGAGAGGAAGAAGAAGCGAGGGCGGGAGCGGCGACGACGAGGGAGGAGAAAGGAGAAAAGAAAGGGAGAATGAGAAT
AAAAGTAGTGTTGACAAAAGAGGAATTGCAGTGGCTAATGGAGCAAATTAAGGAGAGAGGAGGGAAGGGATTAGAAGAATTGTTGGAAGAGATTGAGAGAGGAAGAAAAA
AAGTAGTGAATTATTGTATTGAAGAAGAAGATGAAGATGATGTAAATAATAATAATAATGGTTATTGGAGACCTTCTTTGGAGAGTATTATGGAATGCCCTGAAGTTCCT
GATCAGATGCAGAGATAA
mRNA sequenceShow/hide mRNA sequence
CATTTTTCTCTCTCACCTCAATTTCCATTACCAACTCCAAAATCCGCCGGAAAAACCATCCGAGCAGCGGCCAACGACTCCGGTGGCGATATCATCGATGGGCAATTGCG
TGGAAGTGTTATCGAGGCGGCGAGAGGAAGAAGAAGCGAGGGCGGGAGCGGCGACGACGAGGGAGGAGAAAGGAGAAAAGAAAGGGAGAATGAGAATAAAAGTAGTGTTG
ACAAAAGAGGAATTGCAGTGGCTAATGGAGCAAATTAAGGAGAGAGGAGGGAAGGGATTAGAAGAATTGTTGGAAGAGATTGAGAGAGGAAGAAAAAAAGTAGTGAATTA
TTGTATTGAAGAAGAAGATGAAGATGATGTAAATAATAATAATAATGGTTATTGGAGACCTTCTTTGGAGAGTATTATGGAATGCCCTGAAGTTCCTGATCAGATGCAGA
GATAAAAGAATAATATATGTTTACCTTTGTCTTCTTCTCTTCCTCTTTTCTCATATCTAAAAAAAAAAATAGTGGCAGGAACGAATATTAGTTTCTATGATCGAAGTATC
AGAGAAATATTGTTCGAGATAGGTTCTTCTTTTTGTACCCACCTCTTTTTCAACTTTTAGGTTCCTCTTTATGATCATCAGATCTAGATATATAAGTTTTTCTTTTCGCA
CCAAATTTCTCTTTCTTTCTACTTTTAGGTTTTTGTTTTGGGATTTGGATAATGAGCCAAGTTTGTAATTATACATTTTGTTTTAATTGGAGAGCC
Protein sequenceShow/hide protein sequence
MGNCVEVLSRRREEEEARAGAATTREEKGEKKGRMRIKVVLTKEELQWLMEQIKERGGKGLEELLEEIERGRKKVVNYCIEEEDEDDVNNNNNGYWRPSLESIMECPEVP
DQMQR