| GenBank top hits | e value | %identity | Alignment |
|---|
| ADJ18449.1 gag/pol protein, partial [Bryonia dioica] | 1.6e-241 | 61.55 | Show/hide |
Query: MVLNTELFKTANGQTKKRKISPKENSHLWHLRLGHINLNRIERLVKNGLLNELEENSLSVCESCLEGKMTKRPFSGKGYRAEDTLELIHSDLCGPMNIKA
+VLNTE+F+T Q KK+K+S N++LWHLRLGHINLNRIERLVK+G+LN+LE+NSL CESCLEGKMTKR F+GKG RA+ LEL+HSDLCGPMN+KA
Subjt: MVLNTELFKTANGQTKKRKISPKENSHLWHLRLGHINLNRIERLVKNGLLNELEENSLSVCESCLEGKMTKRPFSGKGYRAEDTLELIHSDLCGPMNIKA
Query: KGGYEYFISFIDDYSRYGHIYLMHHKFEALEKFKEFKTEVENQLGKRVKTLRSDRGGEYMDLKFQNYMIENGITSQLSAPGTLHQNGVSE----------
+GGYEYFISFIDD+SRYGH+YL+HHK E+ EKFKE+K EVEN++GK +KTLRSDRGGEYMD KFQ+Y+IE GI SQLSAP T QNGVSE
Subjt: KGGYEYFISFIDDYSRYGHIYLMHHKFEALEKFKEFKTEVENQLGKRVKTLRSDRGGEYMDLKFQNYMIENGITSQLSAPGTLHQNGVSE----------
Query: ---------------------------------------------------RIWGCPTHVLVTNPKKLDSRSKLCLFVGYPKETRGGLFYDPKEDKVFVS
RIWGCP HVLV NPKKL+ RSKLCLFVGYPKE+RGGLFY P+E+KVFVS
Subjt: ---------------------------------------------------RIWGCPTHVLVTNPKKLDSRSKLCLFVGYPKETRGGLFYDPKEDKVFVS
Query: TNATFMEENHIRDHKPKSKVVLSELDGTIAKVANKNTSTSTRVVD-TSLSSQEGPSQELSMPRRSGRVVIQPDRFIGLAETQVVIPDDNCEDPLTYNQAM
TNATF+EE+H R+H+P+SK+VL E+ K A S+ST+VVD ++S Q SQEL +PRRSGRVV QP+R++GL ETQ++IPDD EDPLTY QAM
Subjt: TNATFMEENHIRDHKPKSKVVLSELDGTIAKVANKNTSTSTRVVD-TSLSSQEGPSQELSMPRRSGRVVIQPDRFIGLAETQVVIPDDNCEDPLTYNQAM
Query: VDIDKDKWVIAMDQEMESMHFNSVWDLVDKPDGVKPIGCKWIYKRKRGVNGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMIKSIRILLAVVAYYDYE-
D+D+D+W+ AM+ EMESM+FNSVW LVD P VKPIGCKWIYKRKR GKVQTFKARLVAKGYTQ EGVDYEETFSPVAM+KSIRILL++ +Y+YE
Subjt: VDIDKDKWVIAMDQEMESMHFNSVWDLVDKPDGVKPIGCKWIYKRKRGVNGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMIKSIRILLAVVAYYDYE-
Query: -------------------------------------------------------------------NDDEPCVYKKIINSSVAFLILYVDDILLIGNDV
N DEPCVYKKI+NS VAFLILYVDDILLIGNDV
Subjt: -------------------------------------------------------------------NDDEPCVYKKIINSSVAFLILYVDDILLIGNDV
Query: GYLTDIKEWLATQFQMKDLGDAQFVLGIQIVRNRKNRTLALSQASYIVKVLSRFKMQDSKKGLLPFRHGIHLFKEQCPKTPQGVEDMRRIPYASAVGSLM
YLTD+K+WL TQFQMKDLG+AQ++LGIQIVRNRKN+TLA+SQASYI KVLSR+KMQ+SKKG LPFRHGIHL KEQCPKTPQ VEDMR IPY+SAVGSLM
Subjt: GYLTDIKEWLATQFQMKDLGDAQFVLGIQIVRNRKNRTLALSQASYIVKVLSRFKMQDSKKGLLPFRHGIHLFKEQCPKTPQGVEDMRRIPYASAVGSLM
Query: YAMLCTKRDI
YAMLCT+ DI
Subjt: YAMLCTKRDI
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| KAA0025945.1 gag/pol protein [Cucumis melo var. makuwa] | 6.3e-246 | 62.43 | Show/hide |
Query: VLNTELFKTANGQTKKRKISPKENSHLWHLRLGHINLNRIERLVKNGLLNELEENSLSVCESCLEGKMTKRPFSGKGYRAEDTLELIHSDLCGPMNIKAK
VLN E+F+TAN Q K+++ISP N++LWHLRLGHINL+RI RLVKNGLLN+L++ SL CESCLEGKMTKRPF+GKGYRA++ LELIHSDLCGPMN+KA+
Subjt: VLNTELFKTANGQTKKRKISPKENSHLWHLRLGHINLNRIERLVKNGLLNELEENSLSVCESCLEGKMTKRPFSGKGYRAEDTLELIHSDLCGPMNIKAK
Query: GGYEYFISFIDDYSRYGHIYLMHHKFEALEKFKEFKTEVENQLGKRVKTLRSDRGGEYMDLKFQNYMIENGITSQLSAPGTLHQNGVSE-----------
GG+EYFISFIDDYSRYG++YLM HK EALEKFKE+KTEVEN L K++K LRSDRGGEYMDL+FQ+YMIE+GI SQLSAPGT QNGVSE
Subjt: GGYEYFISFIDDYSRYGHIYLMHHKFEALEKFKEFKTEVENQLGKRVKTLRSDRGGEYMDLKFQNYMIENGITSQLSAPGTLHQNGVSE-----------
Query: --------------------------------------------------RIWGCPTHVLVTNPKKLDSRSKLCLFVGYPKETRGGLFYDPKEDKVFVST
RIWGCP HVLVTNPKKL+ RS+LC FVGYPKETRGGLF+DP+E++VFVST
Subjt: --------------------------------------------------RIWGCPTHVLVTNPKKLDSRSKLCLFVGYPKETRGGLFYDPKEDKVFVST
Query: NATFMEENHIRDHKPKSKVVLSELDGTIAKVANKNTSTSTRVVDTSLSSQEGPSQELSMPRRSGRVVIQPDRFIGLAETQVVIPDDNCEDPLTYNQAMVD
NATF+EE+H+R+HKP+SK+VLSE +V ++ S+RV +T+ S Q PSQ L MPRRSGRVV QP+R++GL ETQVVIPDD EDPL+Y QAM D
Subjt: NATFMEENHIRDHKPKSKVVLSELDGTIAKVANKNTSTSTRVVDTSLSSQEGPSQELSMPRRSGRVVIQPDRFIGLAETQVVIPDDNCEDPLTYNQAMVD
Query: IDKDKWVIAMDQEMESMHFNSVWDLVDKPDGVKPIGCKWIYKRKRGVNGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMIKSIRILLAVVAYYDYE---
+DKD+WV AMD EMESM+FNSVW+LVD P+GVKPIGCKWIYKRKR GKVQTFKARLVAKGYTQ EGVDYEETFSPVAM+KSIRILL++ +YDYE
Subjt: IDKDKWVIAMDQEMESMHFNSVWDLVDKPDGVKPIGCKWIYKRKRGVNGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMIKSIRILLAVVAYYDYE---
Query: -----------------------------------------------------------------NDDEPCVYKKIINSSVAFLILYVDDILLIGNDVGY
N DEPCVYKKI VAFL+LYVDDILLIGNDVGY
Subjt: -----------------------------------------------------------------NDDEPCVYKKIINSSVAFLILYVDDILLIGNDVGY
Query: LTDIKEWLATQFQMKDLGDAQFVLGIQIVRNRKNRTLALSQASYIVKVLSRFKMQDSKKGLLPFRHGIHLFKEQCPKTPQGVEDMRRIPYASAVGSLMYA
LTD+K WLA QFQMKDLG+AQ+VLGIQI+R+RKN+TLALSQA+YI K+L R+ MQ+SKKGLLPFRHG+HL KEQ PKTPQ VEDMRRIPYASAVGSLMYA
Subjt: LTDIKEWLATQFQMKDLGDAQFVLGIQIVRNRKNRTLALSQASYIVKVLSRFKMQDSKKGLLPFRHGIHLFKEQCPKTPQGVEDMRRIPYASAVGSLMYA
Query: MLCTKRDI
MLCT+ DI
Subjt: MLCTKRDI
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| KAA0035907.1 gag/pol protein [Cucumis melo var. makuwa] | 3.3e-242 | 61.72 | Show/hide |
Query: VLNTELFKTANGQTKKRKISPKENSHLWHLRLGHINLNRIERLVKNGLLNELEENSLSVCESCLEGKMTKRPFSGKGYRAEDTLELIHSDLCGPMNIKAK
VLN E+F+TAN Q K+++ISP N++LWHLRLGHINL+RI RLVK+GLLN+L++ SL CESCLEGKMTKRPF+GKGYRA++ LELIHSDLCGPMN+KA+
Subjt: VLNTELFKTANGQTKKRKISPKENSHLWHLRLGHINLNRIERLVKNGLLNELEENSLSVCESCLEGKMTKRPFSGKGYRAEDTLELIHSDLCGPMNIKAK
Query: GGYEYFISFIDDYSRYGHIYLMHHKFEALEKFKEFKTEVENQLGKRVKTLRSDRGGEYMDLKFQNYMIENGITSQLSAPGTLHQNGVSE-----------
G +EYFISFIDDYSRYG++YLM HK EALEKFKE+KTEVEN L K++K RSDRGGEYMDL FQ+YMIE+GI SQLSAPGT QNGVSE
Subjt: GGYEYFISFIDDYSRYGHIYLMHHKFEALEKFKEFKTEVENQLGKRVKTLRSDRGGEYMDLKFQNYMIENGITSQLSAPGTLHQNGVSE-----------
Query: --------------------------------------------------RIWGCPTHVLVTNPKKLDSRSKLCLFVGYPKETRGGLFYDPKEDKVFVST
RIWGCP HVLVTNPKKL+ RS+LC FVGYPKETRGGLF+DPKE++VFVST
Subjt: --------------------------------------------------RIWGCPTHVLVTNPKKLDSRSKLCLFVGYPKETRGGLFYDPKEDKVFVST
Query: NATFMEENHIRDHKPKSKVVLSELDGTIAKVANKNTSTSTRVVDTSLSSQEGPSQELSMPRRSGRVVIQPDRFIGLAETQVVIPDDNCEDPLTYNQAMVD
NATF+EE+H+R+HKP+SK+VLSE +V ++ S+RV +T+ S Q PSQ L MPRRSGRVV QP+R++GL ETQVVIPDD EDPL+Y QAM D
Subjt: NATFMEENHIRDHKPKSKVVLSELDGTIAKVANKNTSTSTRVVDTSLSSQEGPSQELSMPRRSGRVVIQPDRFIGLAETQVVIPDDNCEDPLTYNQAMVD
Query: IDKDKWVIAMDQEMESMHFNSVWDLVDKPDGVKPIGCKWIYKRKRGVNGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMIKSIRILLAVVAYYDYE---
+DKD+WV AMD EMESM+FNSVW+LVD P+GVKPIGCKWIYKRKR GKVQTFKARLVAKGYT+ EGVDYEETFS VAM+KSIRILL++ +YDYE
Subjt: IDKDKWVIAMDQEMESMHFNSVWDLVDKPDGVKPIGCKWIYKRKRGVNGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMIKSIRILLAVVAYYDYE---
Query: -----------------------------------------------------------------NDDEPCVYKKIINSSVAFLILYVDDILLIGNDVGY
N DEPCVYKKI VAFL+LYVDDILLIGNDVGY
Subjt: -----------------------------------------------------------------NDDEPCVYKKIINSSVAFLILYVDDILLIGNDVGY
Query: LTDIKEWLATQFQMKDLGDAQFVLGIQIVRNRKNRTLALSQASYIVKVLSRFKMQDSKKGLLPFRHGIHLFKEQCPKTPQGVEDMRRIPYASAVGSLMYA
LTD+K WLA QFQMKDLG+ Q+VLGIQI+R+RKN+TLALSQA+YI K+L R+ MQ+SKKGLLPFRHG+HL KEQ PKTPQ VEDMRRIPYASAVGSLMYA
Subjt: LTDIKEWLATQFQMKDLGDAQFVLGIQIVRNRKNRTLALSQASYIVKVLSRFKMQDSKKGLLPFRHGIHLFKEQCPKTPQGVEDMRRIPYASAVGSLMYA
Query: MLCTKRDI
MLCT+ DI
Subjt: MLCTKRDI
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| KAA0048404.1 gag/pol protein [Cucumis melo var. makuwa] | 4.7e-241 | 61.18 | Show/hide |
Query: VLNTELFKTANGQTKKRKISPKENSHLWHLRLGHINLNRIERLVKNGLLNELEENSLSVCESCLEGKMTKRPFSGKGYRAEDTLELIHSDLCGPMNIKAK
+LNTE+FKTA Q K+ KISPKEN+HLWHLRLGHINLNRIERLVKNGLL+ELEENSL VCESCLEGKMTKRPF+GKG+RA++ LEL+HSDLCGPMN+KA+
Subjt: VLNTELFKTANGQTKKRKISPKENSHLWHLRLGHINLNRIERLVKNGLLNELEENSLSVCESCLEGKMTKRPFSGKGYRAEDTLELIHSDLCGPMNIKAK
Query: GGYEYFISFIDDYSRYGHIYLMHHKFEALEKFKEFKTEVENQLGKRVKTLRSDRGGEYMDLKFQNYMIENGITSQLSAPGTLHQNGVSE-----------
GG+EYFI+F DDYSRYG++YLM HK EALEKFKE+K EVEN L K +KT RSDRGGEYMDLKFQNY++E GI SQLSAPGT QNGVSE
Subjt: GGYEYFISFIDDYSRYGHIYLMHHKFEALEKFKEFKTEVENQLGKRVKTLRSDRGGEYMDLKFQNYMIENGITSQLSAPGTLHQNGVSE-----------
Query: --------------------------------------------------RIWGCPTHVLVTNPKKLDSRSKLCLFVGYPKETRGGLFYDPKEDKVFVST
RIWGCP HVL NPKKL+ RSKLCLFVGYPK TRGG FYDPK++KVFVST
Subjt: --------------------------------------------------RIWGCPTHVLVTNPKKLDSRSKLCLFVGYPKETRGGLFYDPKEDKVFVST
Query: NATFMEENHIRDHKPKSKVVLSELDGTIAKVANK---NTSTSTRVVDTSLSSQEGPSQELSMPRRSGRVVIQPDRFIGLAETQVVIPDDNCEDPLTYNQA
NATF+EE+HIR+HKP+SK+VL+EL + + + S TRVV S++ Q L PRRSGRV P R++ L ET VI D + EDPLT+ +A
Subjt: NATFMEENHIRDHKPKSKVVLSELDGTIAKVANK---NTSTSTRVVDTSLSSQEGPSQELSMPRRSGRVVIQPDRFIGLAETQVVIPDDNCEDPLTYNQA
Query: MVDIDKDKWVIAMDQEMESMHFNSVWDLVDKPDGVKPIGCKWIYKRKRGVNGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMIKSIRILLAVVAYYDYE
M D+DKD+W+ AM+ E+ESM+FNSVWDLVD+PDGVKPIGCKWIYKRKRG +GKVQTFKARLVAKGYTQVEGVDYEETFSPVAM+KSIRILL++ AY+DYE
Subjt: MVDIDKDKWVIAMDQEMESMHFNSVWDLVDKPDGVKPIGCKWIYKRKRGVNGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMIKSIRILLAVVAYYDYE
Query: --------------------------------------------------------------------NDDEPCVYKKIINSSVAFLILYVDDILLIGND
DEPCVYK+IIN SVAFL+LYVDDILLIGND
Subjt: --------------------------------------------------------------------NDDEPCVYKKIINSSVAFLILYVDDILLIGND
Query: VGYLTDIKEWLATQFQMKDLGDAQFVLGIQIVRNRKNRTLALSQASYIVKVLSRFKMQDSKKGLLPFRHGIHLFKEQCPKTPQGVEDMRRIPYASAVGSL
+G LTDIK+WLATQFQMKDLG+AQFVLGIQI R+RKN+ LALSQASYI K++ ++ MQ+SK+GLLPFRHG+ L KEQCPKTPQ VE+MR IPYASAVGSL
Subjt: VGYLTDIKEWLATQFQMKDLGDAQFVLGIQIVRNRKNRTLALSQASYIVKVLSRFKMQDSKKGLLPFRHGIHLFKEQCPKTPQGVEDMRRIPYASAVGSL
Query: MYAMLCTKRDI
MYAMLCT+ DI
Subjt: MYAMLCTKRDI
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| TYK14550.1 gag/pol protein [Cucumis melo var. makuwa] | 4.7e-241 | 61.18 | Show/hide |
Query: VLNTELFKTANGQTKKRKISPKENSHLWHLRLGHINLNRIERLVKNGLLNELEENSLSVCESCLEGKMTKRPFSGKGYRAEDTLELIHSDLCGPMNIKAK
+LNTE+FKTA Q K+ KISPKEN+HLWHLRLGHINLNRIERLVKNGLL+ELEENSL VCESCLEGKMTKRPF+GKG+RA++ LEL+HSDLCGPMN+KA+
Subjt: VLNTELFKTANGQTKKRKISPKENSHLWHLRLGHINLNRIERLVKNGLLNELEENSLSVCESCLEGKMTKRPFSGKGYRAEDTLELIHSDLCGPMNIKAK
Query: GGYEYFISFIDDYSRYGHIYLMHHKFEALEKFKEFKTEVENQLGKRVKTLRSDRGGEYMDLKFQNYMIENGITSQLSAPGTLHQNGVSE-----------
GG+EYFI+F DDYSRYG++YLM HK EALEKFKE+K EVEN L K +KT RSDRGGEYMDLKFQNY++E GI SQLSAPGT QNGVSE
Subjt: GGYEYFISFIDDYSRYGHIYLMHHKFEALEKFKEFKTEVENQLGKRVKTLRSDRGGEYMDLKFQNYMIENGITSQLSAPGTLHQNGVSE-----------
Query: --------------------------------------------------RIWGCPTHVLVTNPKKLDSRSKLCLFVGYPKETRGGLFYDPKEDKVFVST
RIWGCP HVL NPKKL+ RSKLCLFVGYPK TRGG FYDPK++KVFVST
Subjt: --------------------------------------------------RIWGCPTHVLVTNPKKLDSRSKLCLFVGYPKETRGGLFYDPKEDKVFVST
Query: NATFMEENHIRDHKPKSKVVLSELDGTIAKVANK---NTSTSTRVVDTSLSSQEGPSQELSMPRRSGRVVIQPDRFIGLAETQVVIPDDNCEDPLTYNQA
NATF+EE+HIR+HKP+SK+VL+EL + + + S TRVV S++ Q L PRRSGRV P R++ L ET VI D + EDPLT+ +A
Subjt: NATFMEENHIRDHKPKSKVVLSELDGTIAKVANK---NTSTSTRVVDTSLSSQEGPSQELSMPRRSGRVVIQPDRFIGLAETQVVIPDDNCEDPLTYNQA
Query: MVDIDKDKWVIAMDQEMESMHFNSVWDLVDKPDGVKPIGCKWIYKRKRGVNGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMIKSIRILLAVVAYYDYE
M D+DKD+W+ AM+ E+ESM+FNSVWDLVD+PDGVKPIGCKWIYKRKRG +GKVQTFKARLVAKGYTQVEGVDYEETFSPVAM+KSIRILL++ AY+DYE
Subjt: MVDIDKDKWVIAMDQEMESMHFNSVWDLVDKPDGVKPIGCKWIYKRKRGVNGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMIKSIRILLAVVAYYDYE
Query: --------------------------------------------------------------------NDDEPCVYKKIINSSVAFLILYVDDILLIGND
DEPCVYK+IIN SVAFL+LYVDDILLIGND
Subjt: --------------------------------------------------------------------NDDEPCVYKKIINSSVAFLILYVDDILLIGND
Query: VGYLTDIKEWLATQFQMKDLGDAQFVLGIQIVRNRKNRTLALSQASYIVKVLSRFKMQDSKKGLLPFRHGIHLFKEQCPKTPQGVEDMRRIPYASAVGSL
+G LTDIK+WLATQFQMKDLG+AQFVLGIQI R+RKN+ LALSQASYI K++ ++ MQ+SK+GLLPFRHG+ L KEQCPKTPQ VE+MR IPYASAVGSL
Subjt: VGYLTDIKEWLATQFQMKDLGDAQFVLGIQIVRNRKNRTLALSQASYIVKVLSRFKMQDSKKGLLPFRHGIHLFKEQCPKTPQGVEDMRRIPYASAVGSL
Query: MYAMLCTKRDI
MYAMLCT+ DI
Subjt: MYAMLCTKRDI
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SMH8 Gag/pol protein | 2.3e-241 | 61.18 | Show/hide |
Query: VLNTELFKTANGQTKKRKISPKENSHLWHLRLGHINLNRIERLVKNGLLNELEENSLSVCESCLEGKMTKRPFSGKGYRAEDTLELIHSDLCGPMNIKAK
+LNTE+FKTA Q K+ KISPKEN+HLWHLRLGHINLNRIERLVKNGLL+ELEENSL VCESCLEGKMTKRPF+GKG+RA++ LEL+HSDLCGPMN+KA+
Subjt: VLNTELFKTANGQTKKRKISPKENSHLWHLRLGHINLNRIERLVKNGLLNELEENSLSVCESCLEGKMTKRPFSGKGYRAEDTLELIHSDLCGPMNIKAK
Query: GGYEYFISFIDDYSRYGHIYLMHHKFEALEKFKEFKTEVENQLGKRVKTLRSDRGGEYMDLKFQNYMIENGITSQLSAPGTLHQNGVSE-----------
GG+EYFI+F DDYSRYG++YLM HK EALEKFKE+K EVEN L K +KT RSDRGGEYMDLKFQNY++E GI SQLSAPGT QNGVSE
Subjt: GGYEYFISFIDDYSRYGHIYLMHHKFEALEKFKEFKTEVENQLGKRVKTLRSDRGGEYMDLKFQNYMIENGITSQLSAPGTLHQNGVSE-----------
Query: --------------------------------------------------RIWGCPTHVLVTNPKKLDSRSKLCLFVGYPKETRGGLFYDPKEDKVFVST
RIWGCP HVL NPKKL+ RSKLCLFVGYPK TRGG FYDPK++KVFVST
Subjt: --------------------------------------------------RIWGCPTHVLVTNPKKLDSRSKLCLFVGYPKETRGGLFYDPKEDKVFVST
Query: NATFMEENHIRDHKPKSKVVLSELDGTIAKVANK---NTSTSTRVVDTSLSSQEGPSQELSMPRRSGRVVIQPDRFIGLAETQVVIPDDNCEDPLTYNQA
NATF+EE+HIR+HKP+SK+VL+EL + + + S TRVV S++ Q L PRRSGRV P R++ L ET VI D + EDPLT+ +A
Subjt: NATFMEENHIRDHKPKSKVVLSELDGTIAKVANK---NTSTSTRVVDTSLSSQEGPSQELSMPRRSGRVVIQPDRFIGLAETQVVIPDDNCEDPLTYNQA
Query: MVDIDKDKWVIAMDQEMESMHFNSVWDLVDKPDGVKPIGCKWIYKRKRGVNGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMIKSIRILLAVVAYYDYE
M D+DKD+W+ AM+ E+ESM+FNSVWDLVD+PDGVKPIGCKWIYKRKRG +GKVQTFKARLVAKGYTQVEGVDYEETFSPVAM+KSIRILL++ AY+DYE
Subjt: MVDIDKDKWVIAMDQEMESMHFNSVWDLVDKPDGVKPIGCKWIYKRKRGVNGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMIKSIRILLAVVAYYDYE
Query: --------------------------------------------------------------------NDDEPCVYKKIINSSVAFLILYVDDILLIGND
DEPCVYK+IIN SVAFL+LYVDDILLIGND
Subjt: --------------------------------------------------------------------NDDEPCVYKKIINSSVAFLILYVDDILLIGND
Query: VGYLTDIKEWLATQFQMKDLGDAQFVLGIQIVRNRKNRTLALSQASYIVKVLSRFKMQDSKKGLLPFRHGIHLFKEQCPKTPQGVEDMRRIPYASAVGSL
+G LTDIK+WLATQFQMKDLG+AQFVLGIQI R+RKN+ LALSQASYI K++ ++ MQ+SK+GLLPFRHG+ L KEQCPKTPQ VE+MR IPYASAVGSL
Subjt: VGYLTDIKEWLATQFQMKDLGDAQFVLGIQIVRNRKNRTLALSQASYIVKVLSRFKMQDSKKGLLPFRHGIHLFKEQCPKTPQGVEDMRRIPYASAVGSL
Query: MYAMLCTKRDI
MYAMLCT+ DI
Subjt: MYAMLCTKRDI
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| A0A5A7T2V9 Gag/pol protein | 1.6e-242 | 61.72 | Show/hide |
Query: VLNTELFKTANGQTKKRKISPKENSHLWHLRLGHINLNRIERLVKNGLLNELEENSLSVCESCLEGKMTKRPFSGKGYRAEDTLELIHSDLCGPMNIKAK
VLN E+F+TAN Q K+++ISP N++LWHLRLGHINL+RI RLVK+GLLN+L++ SL CESCLEGKMTKRPF+GKGYRA++ LELIHSDLCGPMN+KA+
Subjt: VLNTELFKTANGQTKKRKISPKENSHLWHLRLGHINLNRIERLVKNGLLNELEENSLSVCESCLEGKMTKRPFSGKGYRAEDTLELIHSDLCGPMNIKAK
Query: GGYEYFISFIDDYSRYGHIYLMHHKFEALEKFKEFKTEVENQLGKRVKTLRSDRGGEYMDLKFQNYMIENGITSQLSAPGTLHQNGVSE-----------
G +EYFISFIDDYSRYG++YLM HK EALEKFKE+KTEVEN L K++K RSDRGGEYMDL FQ+YMIE+GI SQLSAPGT QNGVSE
Subjt: GGYEYFISFIDDYSRYGHIYLMHHKFEALEKFKEFKTEVENQLGKRVKTLRSDRGGEYMDLKFQNYMIENGITSQLSAPGTLHQNGVSE-----------
Query: --------------------------------------------------RIWGCPTHVLVTNPKKLDSRSKLCLFVGYPKETRGGLFYDPKEDKVFVST
RIWGCP HVLVTNPKKL+ RS+LC FVGYPKETRGGLF+DPKE++VFVST
Subjt: --------------------------------------------------RIWGCPTHVLVTNPKKLDSRSKLCLFVGYPKETRGGLFYDPKEDKVFVST
Query: NATFMEENHIRDHKPKSKVVLSELDGTIAKVANKNTSTSTRVVDTSLSSQEGPSQELSMPRRSGRVVIQPDRFIGLAETQVVIPDDNCEDPLTYNQAMVD
NATF+EE+H+R+HKP+SK+VLSE +V ++ S+RV +T+ S Q PSQ L MPRRSGRVV QP+R++GL ETQVVIPDD EDPL+Y QAM D
Subjt: NATFMEENHIRDHKPKSKVVLSELDGTIAKVANKNTSTSTRVVDTSLSSQEGPSQELSMPRRSGRVVIQPDRFIGLAETQVVIPDDNCEDPLTYNQAMVD
Query: IDKDKWVIAMDQEMESMHFNSVWDLVDKPDGVKPIGCKWIYKRKRGVNGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMIKSIRILLAVVAYYDYE---
+DKD+WV AMD EMESM+FNSVW+LVD P+GVKPIGCKWIYKRKR GKVQTFKARLVAKGYT+ EGVDYEETFS VAM+KSIRILL++ +YDYE
Subjt: IDKDKWVIAMDQEMESMHFNSVWDLVDKPDGVKPIGCKWIYKRKRGVNGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMIKSIRILLAVVAYYDYE---
Query: -----------------------------------------------------------------NDDEPCVYKKIINSSVAFLILYVDDILLIGNDVGY
N DEPCVYKKI VAFL+LYVDDILLIGNDVGY
Subjt: -----------------------------------------------------------------NDDEPCVYKKIINSSVAFLILYVDDILLIGNDVGY
Query: LTDIKEWLATQFQMKDLGDAQFVLGIQIVRNRKNRTLALSQASYIVKVLSRFKMQDSKKGLLPFRHGIHLFKEQCPKTPQGVEDMRRIPYASAVGSLMYA
LTD+K WLA QFQMKDLG+ Q+VLGIQI+R+RKN+TLALSQA+YI K+L R+ MQ+SKKGLLPFRHG+HL KEQ PKTPQ VEDMRRIPYASAVGSLMYA
Subjt: LTDIKEWLATQFQMKDLGDAQFVLGIQIVRNRKNRTLALSQASYIVKVLSRFKMQDSKKGLLPFRHGIHLFKEQCPKTPQGVEDMRRIPYASAVGSLMYA
Query: MLCTKRDI
MLCT+ DI
Subjt: MLCTKRDI
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| A0A5A7TZD0 Gag/pol protein | 3.1e-246 | 62.43 | Show/hide |
Query: VLNTELFKTANGQTKKRKISPKENSHLWHLRLGHINLNRIERLVKNGLLNELEENSLSVCESCLEGKMTKRPFSGKGYRAEDTLELIHSDLCGPMNIKAK
VLN E+F+TAN Q K+++ISP N++LWHLRLGHINL+RI RLVKNGLLN+L++ SL CESCLEGKMTKRPF+GKGYRA++ LELIHSDLCGPMN+KA+
Subjt: VLNTELFKTANGQTKKRKISPKENSHLWHLRLGHINLNRIERLVKNGLLNELEENSLSVCESCLEGKMTKRPFSGKGYRAEDTLELIHSDLCGPMNIKAK
Query: GGYEYFISFIDDYSRYGHIYLMHHKFEALEKFKEFKTEVENQLGKRVKTLRSDRGGEYMDLKFQNYMIENGITSQLSAPGTLHQNGVSE-----------
GG+EYFISFIDDYSRYG++YLM HK EALEKFKE+KTEVEN L K++K LRSDRGGEYMDL+FQ+YMIE+GI SQLSAPGT QNGVSE
Subjt: GGYEYFISFIDDYSRYGHIYLMHHKFEALEKFKEFKTEVENQLGKRVKTLRSDRGGEYMDLKFQNYMIENGITSQLSAPGTLHQNGVSE-----------
Query: --------------------------------------------------RIWGCPTHVLVTNPKKLDSRSKLCLFVGYPKETRGGLFYDPKEDKVFVST
RIWGCP HVLVTNPKKL+ RS+LC FVGYPKETRGGLF+DP+E++VFVST
Subjt: --------------------------------------------------RIWGCPTHVLVTNPKKLDSRSKLCLFVGYPKETRGGLFYDPKEDKVFVST
Query: NATFMEENHIRDHKPKSKVVLSELDGTIAKVANKNTSTSTRVVDTSLSSQEGPSQELSMPRRSGRVVIQPDRFIGLAETQVVIPDDNCEDPLTYNQAMVD
NATF+EE+H+R+HKP+SK+VLSE +V ++ S+RV +T+ S Q PSQ L MPRRSGRVV QP+R++GL ETQVVIPDD EDPL+Y QAM D
Subjt: NATFMEENHIRDHKPKSKVVLSELDGTIAKVANKNTSTSTRVVDTSLSSQEGPSQELSMPRRSGRVVIQPDRFIGLAETQVVIPDDNCEDPLTYNQAMVD
Query: IDKDKWVIAMDQEMESMHFNSVWDLVDKPDGVKPIGCKWIYKRKRGVNGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMIKSIRILLAVVAYYDYE---
+DKD+WV AMD EMESM+FNSVW+LVD P+GVKPIGCKWIYKRKR GKVQTFKARLVAKGYTQ EGVDYEETFSPVAM+KSIRILL++ +YDYE
Subjt: IDKDKWVIAMDQEMESMHFNSVWDLVDKPDGVKPIGCKWIYKRKRGVNGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMIKSIRILLAVVAYYDYE---
Query: -----------------------------------------------------------------NDDEPCVYKKIINSSVAFLILYVDDILLIGNDVGY
N DEPCVYKKI VAFL+LYVDDILLIGNDVGY
Subjt: -----------------------------------------------------------------NDDEPCVYKKIINSSVAFLILYVDDILLIGNDVGY
Query: LTDIKEWLATQFQMKDLGDAQFVLGIQIVRNRKNRTLALSQASYIVKVLSRFKMQDSKKGLLPFRHGIHLFKEQCPKTPQGVEDMRRIPYASAVGSLMYA
LTD+K WLA QFQMKDLG+AQ+VLGIQI+R+RKN+TLALSQA+YI K+L R+ MQ+SKKGLLPFRHG+HL KEQ PKTPQ VEDMRRIPYASAVGSLMYA
Subjt: LTDIKEWLATQFQMKDLGDAQFVLGIQIVRNRKNRTLALSQASYIVKVLSRFKMQDSKKGLLPFRHGIHLFKEQCPKTPQGVEDMRRIPYASAVGSLMYA
Query: MLCTKRDI
MLCT+ DI
Subjt: MLCTKRDI
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| A0A5D3CPJ6 Gag/pol protein | 2.3e-241 | 61.18 | Show/hide |
Query: VLNTELFKTANGQTKKRKISPKENSHLWHLRLGHINLNRIERLVKNGLLNELEENSLSVCESCLEGKMTKRPFSGKGYRAEDTLELIHSDLCGPMNIKAK
+LNTE+FKTA Q K+ KISPKEN+HLWHLRLGHINLNRIERLVKNGLL+ELEENSL VCESCLEGKMTKRPF+GKG+RA++ LEL+HSDLCGPMN+KA+
Subjt: VLNTELFKTANGQTKKRKISPKENSHLWHLRLGHINLNRIERLVKNGLLNELEENSLSVCESCLEGKMTKRPFSGKGYRAEDTLELIHSDLCGPMNIKAK
Query: GGYEYFISFIDDYSRYGHIYLMHHKFEALEKFKEFKTEVENQLGKRVKTLRSDRGGEYMDLKFQNYMIENGITSQLSAPGTLHQNGVSE-----------
GG+EYFI+F DDYSRYG++YLM HK EALEKFKE+K EVEN L K +KT RSDRGGEYMDLKFQNY++E GI SQLSAPGT QNGVSE
Subjt: GGYEYFISFIDDYSRYGHIYLMHHKFEALEKFKEFKTEVENQLGKRVKTLRSDRGGEYMDLKFQNYMIENGITSQLSAPGTLHQNGVSE-----------
Query: --------------------------------------------------RIWGCPTHVLVTNPKKLDSRSKLCLFVGYPKETRGGLFYDPKEDKVFVST
RIWGCP HVL NPKKL+ RSKLCLFVGYPK TRGG FYDPK++KVFVST
Subjt: --------------------------------------------------RIWGCPTHVLVTNPKKLDSRSKLCLFVGYPKETRGGLFYDPKEDKVFVST
Query: NATFMEENHIRDHKPKSKVVLSELDGTIAKVANK---NTSTSTRVVDTSLSSQEGPSQELSMPRRSGRVVIQPDRFIGLAETQVVIPDDNCEDPLTYNQA
NATF+EE+HIR+HKP+SK+VL+EL + + + S TRVV S++ Q L PRRSGRV P R++ L ET VI D + EDPLT+ +A
Subjt: NATFMEENHIRDHKPKSKVVLSELDGTIAKVANK---NTSTSTRVVDTSLSSQEGPSQELSMPRRSGRVVIQPDRFIGLAETQVVIPDDNCEDPLTYNQA
Query: MVDIDKDKWVIAMDQEMESMHFNSVWDLVDKPDGVKPIGCKWIYKRKRGVNGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMIKSIRILLAVVAYYDYE
M D+DKD+W+ AM+ E+ESM+FNSVWDLVD+PDGVKPIGCKWIYKRKRG +GKVQTFKARLVAKGYTQVEGVDYEETFSPVAM+KSIRILL++ AY+DYE
Subjt: MVDIDKDKWVIAMDQEMESMHFNSVWDLVDKPDGVKPIGCKWIYKRKRGVNGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMIKSIRILLAVVAYYDYE
Query: --------------------------------------------------------------------NDDEPCVYKKIINSSVAFLILYVDDILLIGND
DEPCVYK+IIN SVAFL+LYVDDILLIGND
Subjt: --------------------------------------------------------------------NDDEPCVYKKIINSSVAFLILYVDDILLIGND
Query: VGYLTDIKEWLATQFQMKDLGDAQFVLGIQIVRNRKNRTLALSQASYIVKVLSRFKMQDSKKGLLPFRHGIHLFKEQCPKTPQGVEDMRRIPYASAVGSL
+G LTDIK+WLATQFQMKDLG+AQFVLGIQI R+RKN+ LALSQASYI K++ ++ MQ+SK+GLLPFRHG+ L KEQCPKTPQ VE+MR IPYASAVGSL
Subjt: VGYLTDIKEWLATQFQMKDLGDAQFVLGIQIVRNRKNRTLALSQASYIVKVLSRFKMQDSKKGLLPFRHGIHLFKEQCPKTPQGVEDMRRIPYASAVGSL
Query: MYAMLCTKRDI
MYAMLCT+ DI
Subjt: MYAMLCTKRDI
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| E2GK51 Gag/pol protein (Fragment) | 7.8e-242 | 61.55 | Show/hide |
Query: MVLNTELFKTANGQTKKRKISPKENSHLWHLRLGHINLNRIERLVKNGLLNELEENSLSVCESCLEGKMTKRPFSGKGYRAEDTLELIHSDLCGPMNIKA
+VLNTE+F+T Q KK+K+S N++LWHLRLGHINLNRIERLVK+G+LN+LE+NSL CESCLEGKMTKR F+GKG RA+ LEL+HSDLCGPMN+KA
Subjt: MVLNTELFKTANGQTKKRKISPKENSHLWHLRLGHINLNRIERLVKNGLLNELEENSLSVCESCLEGKMTKRPFSGKGYRAEDTLELIHSDLCGPMNIKA
Query: KGGYEYFISFIDDYSRYGHIYLMHHKFEALEKFKEFKTEVENQLGKRVKTLRSDRGGEYMDLKFQNYMIENGITSQLSAPGTLHQNGVSE----------
+GGYEYFISFIDD+SRYGH+YL+HHK E+ EKFKE+K EVEN++GK +KTLRSDRGGEYMD KFQ+Y+IE GI SQLSAP T QNGVSE
Subjt: KGGYEYFISFIDDYSRYGHIYLMHHKFEALEKFKEFKTEVENQLGKRVKTLRSDRGGEYMDLKFQNYMIENGITSQLSAPGTLHQNGVSE----------
Query: ---------------------------------------------------RIWGCPTHVLVTNPKKLDSRSKLCLFVGYPKETRGGLFYDPKEDKVFVS
RIWGCP HVLV NPKKL+ RSKLCLFVGYPKE+RGGLFY P+E+KVFVS
Subjt: ---------------------------------------------------RIWGCPTHVLVTNPKKLDSRSKLCLFVGYPKETRGGLFYDPKEDKVFVS
Query: TNATFMEENHIRDHKPKSKVVLSELDGTIAKVANKNTSTSTRVVD-TSLSSQEGPSQELSMPRRSGRVVIQPDRFIGLAETQVVIPDDNCEDPLTYNQAM
TNATF+EE+H R+H+P+SK+VL E+ K A S+ST+VVD ++S Q SQEL +PRRSGRVV QP+R++GL ETQ++IPDD EDPLTY QAM
Subjt: TNATFMEENHIRDHKPKSKVVLSELDGTIAKVANKNTSTSTRVVD-TSLSSQEGPSQELSMPRRSGRVVIQPDRFIGLAETQVVIPDDNCEDPLTYNQAM
Query: VDIDKDKWVIAMDQEMESMHFNSVWDLVDKPDGVKPIGCKWIYKRKRGVNGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMIKSIRILLAVVAYYDYE-
D+D+D+W+ AM+ EMESM+FNSVW LVD P VKPIGCKWIYKRKR GKVQTFKARLVAKGYTQ EGVDYEETFSPVAM+KSIRILL++ +Y+YE
Subjt: VDIDKDKWVIAMDQEMESMHFNSVWDLVDKPDGVKPIGCKWIYKRKRGVNGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMIKSIRILLAVVAYYDYE-
Query: -------------------------------------------------------------------NDDEPCVYKKIINSSVAFLILYVDDILLIGNDV
N DEPCVYKKI+NS VAFLILYVDDILLIGNDV
Subjt: -------------------------------------------------------------------NDDEPCVYKKIINSSVAFLILYVDDILLIGNDV
Query: GYLTDIKEWLATQFQMKDLGDAQFVLGIQIVRNRKNRTLALSQASYIVKVLSRFKMQDSKKGLLPFRHGIHLFKEQCPKTPQGVEDMRRIPYASAVGSLM
YLTD+K+WL TQFQMKDLG+AQ++LGIQIVRNRKN+TLA+SQASYI KVLSR+KMQ+SKKG LPFRHGIHL KEQCPKTPQ VEDMR IPY+SAVGSLM
Subjt: GYLTDIKEWLATQFQMKDLGDAQFVLGIQIVRNRKNRTLALSQASYIVKVLSRFKMQDSKKGLLPFRHGIHLFKEQCPKTPQGVEDMRRIPYASAVGSLM
Query: YAMLCTKRDI
YAMLCT+ DI
Subjt: YAMLCTKRDI
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 3.2e-43 | 22.5 | Show/hide |
Query: KENSHLWHLRLGHIN------LNRIERLVKNGLLNELEENSLSVCESCLEGKMTKRPFSGKGYRA--EDTLELIHSDLCGPMNIKAKGGYEYFISFIDDY
K N LWH R GHI+ + R LLN L E S +CE CL GK + PF + + L ++HSD+CGP+ YF+ F+D +
Subjt: KENSHLWHLRLGHIN------LNRIERLVKNGLLNELEENSLSVCESCLEGKMTKRPFSGKGYRA--EDTLELIHSDLCGPMNIKAKGGYEYFISFIDDY
Query: SRYGHIYLMHHKFEALEKFKEFKTEVENQLGKRVKTLRSDRGGEYMDLKFQNYMIENGITSQLSAPGTLHQNGVSERI---------------------W
+ Y YL+ +K + F++F + E +V L D G EY+ + + + ++ GI+ L+ P T NGVSER+ W
Subjt: SRYGHIYLMHHKFEALEKFKEFKTEVENQLGKRVKTLRSDRGGEYMDLKFQNYMIENGITSQLSAPGTLHQNGVSERI---------------------W
Query: G------------CPTHVLVTNPK--------------------------------KLDSRSKLCLFVGYPKETRGGLFYDPKEDKVFVSTNATFMEENH
G P+ LV + K K D +S +FVGY E G +D +K V+ + E N
Subjt: G------------CPTHVLVTNPK--------------------------------KLDSRSKLCLFVGYPKETRGGLFYDPKEDKVFVSTNATFMEENH
Query: IRDHKPK---------------------SKVVLSELDGTIAKV------------ANKNTSTSTRVV---------------------------------
+ K K++ +E + NKN +R +
Subjt: IRDHKPK---------------------SKVVLSELDGTIAKV------------ANKNTSTSTRVV---------------------------------
Query: ----DTSLSSQEG---PSQELS-----------------------MPRRSGRVVIQPDRFIGLAE---TQVVIPDDNC--EDPLTYNQAMVDIDKDKWVI
D L+ +G P++ + RRS R+ +P + +VV+ + P ++++ DK W
Subjt: ----DTSLSSQEG---PSQELS-----------------------MPRRSGRVVIQPDRFIGLAE---TQVVIPDDNC--EDPLTYNQAMVDIDKDKWVI
Query: AMDQEMESMHFNSVWDLVDKPDGVKPIGCKWIYKRKRGVNGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMIKSIRILLAVVAYYDYE-----------
A++ E+ + N+ W + +P+ + +W++ K G +KARLVA+G+TQ +DYEETF+PVA I S R +L++V Y+ +
Subjt: AMDQEMESMHFNSVWDLVDKPDGVKPIGCKWIYKRKRGVNGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMIKSIRILLAVVAYYDYE-----------
Query: ------------------NDDEPCVYKK------------------------IINSSV---------------AFLILYVDDILLIGNDVGYLTDIKEWL
N D C K +NSSV +++LYVDD+++ D+ + + K +L
Subjt: ------------------NDDEPCVYKK------------------------IINSSV---------------AFLILYVDDILLIGNDVGYLTDIKEWL
Query: ATQFQMKDLGDAQFVLGIQIVRNRKNRTLALSQASYIVKVLSRFKMQDSKKGLLPFRHGIHLFKEQCPKTPQGVEDMRRIPYASAVGSLMYAMLCTKRDI
+F+M DL + + +GI+I + + LSQ++Y+ K+LS+F M++ P I+ + ED P S +G LMY MLCT+ D+
Subjt: ATQFQMKDLGDAQFVLGIQIVRNRKNRTLALSQASYIVKVLSRFKMQDSKKGLLPFRHGIHLFKEQCPKTPQGVEDMRRIPYASAVGSLMYAMLCTKRDI
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.8e-87 | 30.38 | Show/hide |
Query: LWHLRLGHINLNRIERLVKNGLLNELEENSLSVCESCLEGKMTKRPFSGKGYRAEDTLELIHSDLCGPMNIKAKGGYEYFISFIDDYSRYGHIYLMHHKF
LWH R+GH++ ++ L K L++ + ++ C+ CL GK + F R + L+L++SD+CGPM I++ GG +YF++FIDD SR +Y++ K
Subjt: LWHLRLGHINLNRIERLVKNGLLNELEENSLSVCESCLEGKMTKRPFSGKGYRAEDTLELIHSDLCGPMNIKAKGGYEYFISFIDDYSRYGHIYLMHHKF
Query: EALEKFKEFKTEVENQLGKRVKTLRSDRGGEYMDLKFQNYMIENGITSQLSAPGTLHQNGVSER------------------------------------
+ + F++F VE + G+++K LRSD GGEY +F+ Y +GI + + PGT NGV+ER
Subjt: EALEKFKEFKTEVENQLGKRVKTLRSDRGGEYMDLKFQNYMIENGITSQLSAPGTLHQNGVSER------------------------------------
Query: --------------------------IWGCP--THVLVTNPKKLDSRSKLCLFVGYPKETRGGLFYDPKEDKVFVSTNATFMEENHIR---DHKPKSKVV
++GC HV KLD +S C+F+GY E G +DP + KV S + F E+ +R D K K
Subjt: --------------------------IWGCP--THVLVTNPKKLDSRSKLCLFVGYPKETRGGLFYDPKEDKVFVSTNATFMEENHIR---DHKPKSKVV
Query: LSELDGTIAKVANKNTSTSTRV-------------------VDTSLSSQEGPSQ--ELSMP-RRSGRVVIQPDRFIGLAETQVVIPDDNCEDPLTYNQAM
+ TI +N TS + +D + E P+Q E P RRS R ++ R+ T+ V+ D+ +P + + +
Subjt: LSELDGTIAKVANKNTSTSTRV-------------------VDTSLSSQEGPSQ--ELSMP-RRSGRVVIQPDRFIGLAETQVVIPDDNCEDPLTYNQAM
Query: VDIDKDKWVIAMDQEMESMHFNSVWDLVDKPDGVKPIGCKWIYKRKRGVNGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMIKSIRILLAVVAYYDYEN
+K++ + AM +EMES+ N + LV+ P G +P+ CKW++K K+ + K+ +KARLV KG+ Q +G+D++E FSPV + SIR +L++ A D E
Subjt: VDIDKDKWVIAMDQEMESMHFNSVWDLVDKPDGVKPIGCKWIYKRKRGVNGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMIKSIRILLAVVAYYDYEN
Query: D--------------------------------------------------------------------DEPCVY-KKIINSSVAFLILYVDDILLIGND
+ +PCVY K+ ++ L+LYVDD+L++G D
Subjt: D--------------------------------------------------------------------DEPCVY-KKIINSSVAFLILYVDDILLIGND
Query: VGYLTDIKEWLATQFQMKDLGDAQFVLGIQIVRNRKNRTLALSQASYIVKVLSRFKMQDSKKGLLPFRHGIHLFKEQCPKTPQGVEDMRRIPYASAVGSL
G + +K L+ F MKDLG AQ +LG++IVR R +R L LSQ YI +VL RF M+++K P + L K+ CP T + +M ++PY+SAVGSL
Subjt: VGYLTDIKEWLATQFQMKDLGDAQFVLGIQIVRNRKNRTLALSQASYIVKVLSRFKMQDSKKGLLPFRHGIHLFKEQCPKTPQGVEDMRRIPYASAVGSL
Query: MYAMLCTKRDI
MYAM+CT+ DI
Subjt: MYAMLCTKRDI
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| P92520 Uncharacterized mitochondrial protein AtMg00820 | 2.0e-13 | 42.35 | Show/hide |
Query: WVIAMDQEMESMHFNSVWDLVDKPDGVKPIGCKWIYKRKRGVNGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMIKSIRILLAV
W AM +E++++ N W LV P +GCKW++K K +G + KARLVAKG+ Q EG+ + ET+SPV +IR +L V
Subjt: WVIAMDQEMESMHFNSVWDLVDKPDGVKPIGCKWIYKRKRGVNGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMIKSIRILLAV
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 2.4e-38 | 22.86 | Show/hide |
Query: SPKENSHLWHLRLGHINLNRIERLVKNGLLNELE-ENSLSVCESCLEGKMTKRPFSGKGYRAEDTLELIHSDLCGPMNIKAKGGYEYFISFIDDYSRYGH
S K WH RLGH + + ++ N L+ L + C CL K K PFS + LE I+SD+ I + Y Y++ F+D ++RY
Subjt: SPKENSHLWHLRLGHINLNRIERLVKNGLLNELE-ENSLSVCESCLEGKMTKRPFSGKGYRAEDTLELIHSDLCGPMNIKAKGGYEYFISFIDDYSRYGH
Query: IYLMHHKFEALEKFKEFKTEVENQLGKRVKTLRSDRGGEYMDLKFQNYMIENGITSQLSAPGTLHQNGVSE-----------------------------
+Y + K + E F FK +EN+ R+ T SD GGE++ L Y ++GI+ S P T NG+SE
Subjt: IYLMHHKFEALEKFKEFKTEVENQLGKRVKTLRSDRGGEYMDLKFQNYMIENGITSQLSAPGTLHQNGVSE-----------------------------
Query: ---------------------------------RIWGCPTHVLVT--NPKKLDSRSKLCLFVGYPKETRGGLFYDPKEDKVFVSTNATFME-----ENHI
R++GC + + N KLD +S+ C+F+GY L + ++++S + F E N++
Subjt: ---------------------------------RIWGCPTHVLVT--NPKKLDSRSKLCLFVGYPKETRGGLFYDPKEDKVFVSTNATFME-----ENHI
Query: RDHKP------------------------------------------------KSKVVLSELDGTIA-----------------KVANKNTSTSTRVVDT
P S+V S LD + + + + T T T+ +
Subjt: RDHKP------------------------------------------------KSKVVLSELDGTIA-----------------KVANKNTSTSTRVVDT
Query: SLSSQEGP--------SQELSMPRRSGRVVIQPDRFIGLAETQVVIP--------------DDNCEDPLTYNQ---------------------------
+SQ P +Q LS P +S P + T P ++N + PL +
Subjt: SLSSQEGP--------SQELSMPRRSGRVVIQPDRFIGLAETQVVIP--------------DDNCEDPLTYNQ---------------------------
Query: ---AMVDIDKDKWVIAMDQEMESMHFNSVWDLVDKPDG-VKPIGCKWIYKRKRGVNGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMIKSIRILLAVV-
A+ + ++W AM E+ + N WDLV P V +GC+WI+ +K +G + +KARLVAKGY Q G+DY ETFSPV SIRI+L V
Subjt: ---AMVDIDKDKWVIAMDQEMESMHFNSVWDLVDKPDG-VKPIGCKWIYKRKRGVNGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMIKSIRILLAVV-
Query: ------------------------------AYYDYENDDEPCVYKK------------------------IINS-------------SVAFLILYVDDIL
+ D + + C +K +NS S+ ++++YVDDIL
Subjt: ------------------------------AYYDYENDDEPCVYKK------------------------IINS-------------SVAFLILYVDDIL
Query: LIGNDVGYLTDIKEWLATQFQMKDLGDAQFVLGIQIVRNRKNRTLALSQASYIVKVLSRFKMQDSKKGLLPFRHGIHLFKEQCPKTPQGVEDMRRIPYAS
+ GND L + + L+ +F +KD + + LGI+ R L LSQ YI+ +L+R M +K P L K E Y
Subjt: LIGNDVGYLTDIKEWLATQFQMKDLGDAQFVLGIQIVRNRKNRTLALSQASYIVKVLSRFKMQDSKKGLLPFRHGIHLFKEQCPKTPQGVEDMRRIPYAS
Query: AVGSLMYAMLCTKRDIRF
VGSL Y + T+ DI +
Subjt: AVGSLMYAMLCTKRDIRF
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 2.9e-36 | 22.66 | Show/hide |
Query: ANGQTKKRKISP--KENSHLWHLRLGHINLNRIERLVKNGLLNELE-ENSLSVCESCLEGKMTKRPFSGKGYRAEDTLELIHSDLCGPMNIKAKGGYEYF
A+ Q SP K WH RLGH +L + ++ N L L + L C C K K PFS + LE I+SD+ I + Y Y+
Subjt: ANGQTKKRKISP--KENSHLWHLRLGHINLNRIERLVKNGLLNELE-ENSLSVCESCLEGKMTKRPFSGKGYRAEDTLELIHSDLCGPMNIKAKGGYEYF
Query: ISFIDDYSRYGHIYLMHHKFEALEKFKEFKTEVENQLGKRVKTLRSDRGGEYMDLKFQNYMIENGITSQLSAPGTLHQNGVSER----------------
+ F+D ++RY +Y + K + + F FK+ VEN+ R+ TL SD GGE++ L+ +Y+ ++GI+ S P T NG+SER
Subjt: ISFIDDYSRYGHIYLMHHKFEALEKFKEFKTEVENQLGKRVKTLRSDRGGEYMDLKFQNYMIENGITSQLSAPGTLHQNGVSER----------------
Query: ----------------------------------------------IWGCPTHVLVT--NPKKLDSRSKLCLFVGYPKETRGGLFYDPKEDKVFVSTNAT
++GC + + N KL+ +SK C F+GY L +++ S +
Subjt: ----------------------------------------------IWGCPTHVLVT--NPKKLDSRSKLCLFVGYPKETRGGLFYDPKEDKVFVSTNAT
Query: FME---------------ENHIRDHKPK---------SKVVLSELD--GTIAKVANKNTSTSTRVVDTSLSSQEGPSQELSMPRRS---------GRVVI
F E + D P + +VL G + + S+ + + T +SS PS +S P S +
Subjt: FME---------------ENHIRDHKPK---------SKVVLSELD--GTIAKVANKNTSTSTRVVDTSLSSQEGPSQELSMPRRS---------GRVVI
Query: QPDRFIGLAETQVVI--PDDNCEDPLTYNQ----------------------------------------------------------------------
QP + ++ P+ N P + NQ
Subjt: QPDRFIGLAETQVVI--PDDNCEDPLTYNQ----------------------------------------------------------------------
Query: -------------------AMVDIDKDKWVIAMDQEMESMHFNSVWDLV-DKPDGVKPIGCKWIYKRKRGVNGKVQTFKARLVAKGYTQVEGVDYEETFS
A+ + D+W AM E+ + N WDLV P V +GC+WI+ +K +G + +KARLVAKGY Q G+DY ETFS
Subjt: -------------------AMVDIDKDKWVIAMDQEMESMHFNSVWDLV-DKPDGVKPIGCKWIYKRKRGVNGKVQTFKARLVAKGYTQVEGVDYEETFS
Query: PVAMIKSIRILLAVV-------------------------------AYYDYENDDEPCVYKKII------------------------------------
PV SIRI+L V + D + D C +K I
Subjt: PVAMIKSIRILLAVV-------------------------------AYYDYENDDEPCVYKKII------------------------------------
Query: -NSSVAFLILYVDDILLIGNDVGYLTDIKEWLATQFQMKDLGDAQFVLGIQIVRNRKNRTLALSQASYIVKVLSRFKMQDSKKGLLPFRHGIHLFKEQCP
S+ ++++YVDDIL+ GND L + L+ +F +K+ D + LGI+ R + L LSQ Y + +L+R M +K P L
Subjt: -NSSVAFLILYVDDILLIGNDVGYLTDIKEWLATQFQMKDLGDAQFVLGIQIVRNRKNRTLALSQASYIVKVLSRFKMQDSKKGLLPFRHGIHLFKEQCP
Query: KTPQGVEDMRRIPYASAVGSLMYAMLCTKRDIRF
K P E Y VGSL Y + T+ D+ +
Subjt: KTPQGVEDMRRIPYASAVGSLMYAMLCTKRDIRF
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | 1.4e-28 | 26.99 | Show/hide |
Query: EDPLTYNQAMVDIDKDKWVIAMDQEMESMHFNSVWDLVDKPDGVKPIGCKWIYKRKRGVNGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMIKSIRILL
++P TYN+A + W AMD E+ +M W++ P KPIGCKW+YK K +G ++ +KARLVAKGYTQ EG+D+ ETFSPV + S++++L
Subjt: EDPLTYNQAMVDIDKDKWVIAMDQEMESMHFNSVWDLVDKPDGVKPIGCKWIYKRKRGVNGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMIKSIRILL
Query: AVVAYYDY-------------------------------ENDDEP----CVYKKIIN-----------------------------------SSVAFL--
A+ A Y++ + D P C KK I ++ FL
Subjt: AVVAYYDY-------------------------------ENDDEP----CVYKKIIN-----------------------------------SSVAFL--
Query: ILYVDDILLIGNDVGYLTDIKEWLATQFQMKDLGDAQFVLGIQIVRNRKNRTLALSQASYIVKVLSRFKMQDSKKGLLPFRHGIHLFKEQCPKTPQGVED
++YVDDI++ N+ + ++K L + F+++DLG ++ LG++I R+ + + Q Y + +L + K +P + G +
Subjt: ILYVDDILLIGNDVGYLTDIKEWLATQFQMKDLGDAQFVLGIQIVRNRKNRTLALSQASYIVKVLSRFKMQDSKKGLLPFRHGIHLFKEQCPKTPQGVED
Query: MRRIPYASAVGSLMYAMLCTKRDIRF
+ Y +G LMY + T+ DI F
Subjt: MRRIPYASAVGSLMYAMLCTKRDIRF
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| ATMG00300.1 Gag-Pol-related retrotransposon family protein | 2.4e-09 | 36.84 | Show/hide |
Query: KENSHLWHLRLGHINLNRIERLVKNGLLNELEENSLSVCESCLEGKMTKRPFSGKGYRAEDTLELIHSDLCGPMNI
K+ + LWH RL H++ +E LVK G L+ + +SL CE C+ GK + FS + ++ L+ +HSDL G ++
Subjt: KENSHLWHLRLGHINLNRIERLVKNGLLNELEENSLSVCESCLEGKMTKRPFSGKGYRAEDTLELIHSDLCGPMNI
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| ATMG00810.1 DNA/RNA polymerases superfamily protein | 3.8e-07 | 34.38 | Show/hide |
Query: FLILYVDDILLIGNDVGYLTDIKEWLATQFQMKDLGDAQFVLGIQIVRNRKNRTLALSQASYIVKVLSRFKMQDSKKGLLPFRHGIHLFKEQCPKTPQGV
+L+LYVDDILL G+ L + L++ F MKDLG + LGIQI + L LSQ Y ++L+ M D K P ++ K P
Subjt: FLILYVDDILLIGNDVGYLTDIKEWLATQFQMKDLGDAQFVLGIQIVRNRKNRTLALSQASYIVKVLSRFKMQDSKKGLLPFRHGIHLFKEQCPKTPQGV
Query: EDMRRIPYASAVGSLMYAMLCTKRDIRF
+ + S VG+L Y L T+ DI +
Subjt: EDMRRIPYASAVGSLMYAMLCTKRDIRF
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| ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase) | 1.5e-14 | 42.35 | Show/hide |
Query: WVIAMDQEMESMHFNSVWDLVDKPDGVKPIGCKWIYKRKRGVNGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMIKSIRILLAV
W AM +E++++ N W LV P +GCKW++K K +G + KARLVAKG+ Q EG+ + ET+SPV +IR +L V
Subjt: WVIAMDQEMESMHFNSVWDLVDKPDGVKPIGCKWIYKRKRGVNGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMIKSIRILLAV
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