; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0002729 (gene) of Snake gourd v1 genome

Gene IDTan0002729
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionTransmembrane amino acid transporter family protein
Genome locationLG08:40031267..40034041
RNA-Seq ExpressionTan0002729
SyntenyTan0002729
Gene Ontology termsGO:0006865 - amino acid transport (biological process)
GO:0009734 - auxin-activated signaling pathway (biological process)
GO:0055085 - transmembrane transport (biological process)
GO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0015293 - symporter activity (molecular function)
InterPro domainsIPR013057 - Amino acid transporter, transmembrane domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596171.1 Amino acid transporter AVT1A, partial [Cucurbita argyrosperma subsp. sororia]2.3e-4483.2Show/hide
Query:  MIKFASLTLLKYALLMNPLARSIEELLPPRISNSYGCFILLRTALVISSVCVAFLLPFFGLVMALIGSLLSILVAVIVPTICYLKIMGSEATKMQISSSI
        MI+ ASLTLLKYALLMNPLARSIEELLP RISNS+ CFILLRTALV+SSVCVAFLLPFFGLVMALIGSLLSIL+AVIVP +C+LKIMG EA+KMQ++ S 
Subjt:  MIKFASLTLLKYALLMNPLARSIEELLPPRISNSYGCFILLRTALVISSVCVAFLLPFFGLVMALIGSLLSILVAVIVPTICYLKIMGSEATKMQISSSI

Query:  FVVGLGVVSAIFGTYSSLSQIADSY
        F++GLGV+SAIFGTYSS+SQIA+SY
Subjt:  FVVGLGVVSAIFGTYSSLSQIADSY

KGN59445.1 hypothetical protein Csa_000748 [Cucumis sativus]8.4e-4788Show/hide
Query:  MIKFASLTLLKYALLMNPLARSIEELLPPRISNSYGCFILLRTALVISSVCVAFLLPFFGLVMALIGSLLSILVAVIVPTICYLKIMGSEATKMQISSSI
        MI+FASLTLLKYALLMNPLARSIEELLPPRIS SYGCFILLRTALV SSVCVAF+LPFFGLVM+LIGSLLSILV+VIVPT+CYLKIMGS+ATK+QI+SSI
Subjt:  MIKFASLTLLKYALLMNPLARSIEELLPPRISNSYGCFILLRTALVISSVCVAFLLPFFGLVMALIGSLLSILVAVIVPTICYLKIMGSEATKMQISSSI

Query:  FVVGLGVVSAIFGTYSSLSQIADSY
         VVGLG+VSAI GTYSSLS+IA SY
Subjt:  FVVGLGVVSAIFGTYSSLSQIADSY

XP_022941270.1 amino acid transporter AVT1A-like isoform X3 [Cucurbita moschata]2.3e-4483.2Show/hide
Query:  MIKFASLTLLKYALLMNPLARSIEELLPPRISNSYGCFILLRTALVISSVCVAFLLPFFGLVMALIGSLLSILVAVIVPTICYLKIMGSEATKMQISSSI
        MI+ ASLTLLKYALLMNPLARSIEELLP RISNS+ CFILLRTALV+SSVCVAFLLPFFGLVMALIGSLLSIL+AVIVP +C+LKIMG EA+KMQ++ S 
Subjt:  MIKFASLTLLKYALLMNPLARSIEELLPPRISNSYGCFILLRTALVISSVCVAFLLPFFGLVMALIGSLLSILVAVIVPTICYLKIMGSEATKMQISSSI

Query:  FVVGLGVVSAIFGTYSSLSQIADSY
        F++GLGV+SAIFGTYSS+SQIA+SY
Subjt:  FVVGLGVVSAIFGTYSSLSQIADSY

XP_022971194.1 amino acid transporter AVT1A-like isoform X3 [Cucurbita maxima]3.9e-4483.2Show/hide
Query:  MIKFASLTLLKYALLMNPLARSIEELLPPRISNSYGCFILLRTALVISSVCVAFLLPFFGLVMALIGSLLSILVAVIVPTICYLKIMGSEATKMQISSSI
        MI+ ASLTLLKYALLMNPLARSIEELLP RISNS+ CFILLRTALV+SSVCVAFLLPFFGLVMALIGSLLSIL+AVIVP +C+LKIMG EA+KMQ++ S 
Subjt:  MIKFASLTLLKYALLMNPLARSIEELLPPRISNSYGCFILLRTALVISSVCVAFLLPFFGLVMALIGSLLSILVAVIVPTICYLKIMGSEATKMQISSSI

Query:  FVVGLGVVSAIFGTYSSLSQIADSY
        F++GLGV+SAIFGTYSS+SQIA SY
Subjt:  FVVGLGVVSAIFGTYSSLSQIADSY

XP_023539402.1 amino acid transporter AVT1A-like isoform X3 [Cucurbita pepo subsp. pepo]2.3e-4483.2Show/hide
Query:  MIKFASLTLLKYALLMNPLARSIEELLPPRISNSYGCFILLRTALVISSVCVAFLLPFFGLVMALIGSLLSILVAVIVPTICYLKIMGSEATKMQISSSI
        MI+ ASLTLLKYALLMNPLARSIEELLP RISNS+ CFILLRTALV+SSVCVAFLLPFFGLVMALIGSLLSIL+AVIVP +C+LKIMG EA+KMQ++ S 
Subjt:  MIKFASLTLLKYALLMNPLARSIEELLPPRISNSYGCFILLRTALVISSVCVAFLLPFFGLVMALIGSLLSILVAVIVPTICYLKIMGSEATKMQISSSI

Query:  FVVGLGVVSAIFGTYSSLSQIADSY
        F++GLGV+SAIFGTYSS+SQIA+SY
Subjt:  FVVGLGVVSAIFGTYSSLSQIADSY

TrEMBL top hitse value%identityAlignment
A0A0A0LBQ3 Aa_trans domain-containing protein4.1e-4788Show/hide
Query:  MIKFASLTLLKYALLMNPLARSIEELLPPRISNSYGCFILLRTALVISSVCVAFLLPFFGLVMALIGSLLSILVAVIVPTICYLKIMGSEATKMQISSSI
        MI+FASLTLLKYALLMNPLARSIEELLPPRIS SYGCFILLRTALV SSVCVAF+LPFFGLVM+LIGSLLSILV+VIVPT+CYLKIMGS+ATK+QI+SSI
Subjt:  MIKFASLTLLKYALLMNPLARSIEELLPPRISNSYGCFILLRTALVISSVCVAFLLPFFGLVMALIGSLLSILVAVIVPTICYLKIMGSEATKMQISSSI

Query:  FVVGLGVVSAIFGTYSSLSQIADSY
         VVGLG+VSAI GTYSSLS+IA SY
Subjt:  FVVGLGVVSAIFGTYSSLSQIADSY

A0A1S3B7N4 vacuolar amino acid transporter 1-like isoform X11.6e-4388.7Show/hide
Query:  KYALLMNPLARSIEELLPPRISNSYGCFILLRTALVISSVCVAFLLPFFGLVMALIGSLLSILVAVIVPTICYLKIMGSEATKMQISSSIFVVGLGVVSA
        KYALLMNPLARSIEELLPPRIS SYGCFILLRTALV SSVCVAFLLPFFGLVM+LIGSLLSILV+VIVPTICYLKIMGS+ATK+ I+SSIFVVG+G+VSA
Subjt:  KYALLMNPLARSIEELLPPRISNSYGCFILLRTALVISSVCVAFLLPFFGLVMALIGSLLSILVAVIVPTICYLKIMGSEATKMQISSSIFVVGLGVVSA

Query:  IFGTYSSLSQIADSY
        I GTYSSLS+IA SY
Subjt:  IFGTYSSLSQIADSY

A0A6J1FMS3 amino acid transporter AVT1A-like isoform X23.3e-4183.48Show/hide
Query:  KYALLMNPLARSIEELLPPRISNSYGCFILLRTALVISSVCVAFLLPFFGLVMALIGSLLSILVAVIVPTICYLKIMGSEATKMQISSSIFVVGLGVVSA
        KYALLMNPLARSIEELLP RISNS+ CFILLRTALV+SSVCVAFLLPFFGLVMALIGSLLSIL+AVIVP +C+LKIMG EA+KMQ++ S F++GLGV+SA
Subjt:  KYALLMNPLARSIEELLPPRISNSYGCFILLRTALVISSVCVAFLLPFFGLVMALIGSLLSILVAVIVPTICYLKIMGSEATKMQISSSIFVVGLGVVSA

Query:  IFGTYSSLSQIADSY
        IFGTYSS+SQIA+SY
Subjt:  IFGTYSSLSQIADSY

A0A6J1FT41 amino acid transporter AVT1A-like isoform X31.1e-4483.2Show/hide
Query:  MIKFASLTLLKYALLMNPLARSIEELLPPRISNSYGCFILLRTALVISSVCVAFLLPFFGLVMALIGSLLSILVAVIVPTICYLKIMGSEATKMQISSSI
        MI+ ASLTLLKYALLMNPLARSIEELLP RISNS+ CFILLRTALV+SSVCVAFLLPFFGLVMALIGSLLSIL+AVIVP +C+LKIMG EA+KMQ++ S 
Subjt:  MIKFASLTLLKYALLMNPLARSIEELLPPRISNSYGCFILLRTALVISSVCVAFLLPFFGLVMALIGSLLSILVAVIVPTICYLKIMGSEATKMQISSSI

Query:  FVVGLGVVSAIFGTYSSLSQIADSY
        F++GLGV+SAIFGTYSS+SQIA+SY
Subjt:  FVVGLGVVSAIFGTYSSLSQIADSY

A0A6J1I7V6 amino acid transporter AVT1A-like isoform X31.9e-4483.2Show/hide
Query:  MIKFASLTLLKYALLMNPLARSIEELLPPRISNSYGCFILLRTALVISSVCVAFLLPFFGLVMALIGSLLSILVAVIVPTICYLKIMGSEATKMQISSSI
        MI+ ASLTLLKYALLMNPLARSIEELLP RISNS+ CFILLRTALV+SSVCVAFLLPFFGLVMALIGSLLSIL+AVIVP +C+LKIMG EA+KMQ++ S 
Subjt:  MIKFASLTLLKYALLMNPLARSIEELLPPRISNSYGCFILLRTALVISSVCVAFLLPFFGLVMALIGSLLSILVAVIVPTICYLKIMGSEATKMQISSSI

Query:  FVVGLGVVSAIFGTYSSLSQIADSY
        F++GLGV+SAIFGTYSS+SQIA SY
Subjt:  FVVGLGVVSAIFGTYSSLSQIADSY

SwissProt top hitse value%identityAlignment
F4IUW3 Amino acid transporter AVT1C1.1e-1744.25Show/hide
Query:  KYALLMNPLARSIEELLPPRISNSYGCFILLRTALVISSVCVAFLLPFFGLVMALIGSLLSILVAVIVPTICYLKIMGSEATKMQISSSIFVVGLGVVSA
        KYAL ++P+A S+EEL+P R   S+   I +RT LV S++ V   +PFFGLVM+LIGSLL++LV +I+P  C+L I+  + T  Q+   + ++ +G +S+
Subjt:  KYALLMNPLARSIEELLPPRISNSYGCFILLRTALVISSVCVAFLLPFFGLVMALIGSLLSILVAVIVPTICYLKIMGSEATKMQISSSIFVVGLGVVSA

Query:  IFGTYSSLSQIAD
        + G+YS+LS+I +
Subjt:  IFGTYSSLSQIAD

F4JE35 Amino acid transporter AVT1B2.5e-1742.48Show/hide
Query:  KYALLMNPLARSIEELLPPRISNSYGCFILLRTALVISSVCVAFLLPFFGLVMALIGSLLSILVAVIVPTICYLKIMGSEATKMQISSSIFVVGLGVVSA
        KYAL ++P+A S+EEL+P     S    I +R+AL IS++ V   +PFFGLVM+LIGS L++L+ +I+P  C+L I+  + T  Q++  I ++ +G V +
Subjt:  KYALLMNPLARSIEELLPPRISNSYGCFILLRTALVISSVCVAFLLPFFGLVMALIGSLLSILVAVIVPTICYLKIMGSEATKMQISSSIFVVGLGVVSA

Query:  IFGTYSSLSQIAD
        + GTYS+L++I +
Subjt:  IFGTYSSLSQIAD

O80668 Amino acid transporter AVT1A2.5e-3366.96Show/hide
Query:  KYALLMNPLARSIEELLPPRISNSYGCFILLRTALVISSVCVAFLLPFFGLVMALIGSLLSILVAVIVPTICYLKIMGSEATKMQISSSIFVVGLGVVSA
        KYALLMNPLARSIEELLP R+S +  CF+LLRTALV SSVC AFL+PFFGL+MALIGSLLSILVA+I+P +C++KIMG++AT+ Q+  S  +V +GVVS 
Subjt:  KYALLMNPLARSIEELLPPRISNSYGCFILLRTALVISSVCVAFLLPFFGLVMALIGSLLSILVAVIVPTICYLKIMGSEATKMQISSSIFVVGLGVVSA

Query:  IFGTYSSLSQIADSY
          GTYSS+++I  +Y
Subjt:  IFGTYSSLSQIADSY

Q8GYS4 Amino acid transporter AVT1D2.9e-1846.96Show/hide
Query:  LLKYALLMNPLARSIEELLPPRISNSYGCFILLRTALVISSVCVAFLLPFFGLVMALIGSLLSILVAVIVPTICYLKIMGSEATKMQISSSIFVVGLGVV
        + KYAL + P+  S+EEL+P     S G  IL RT LV S++ VA  +PFF +V ALIGS L++LVA+I P +CYL I+  + +  QI   IF++  GVV
Subjt:  LLKYALLMNPLARSIEELLPPRISNSYGCFILLRTALVISSVCVAFLLPFFGLVMALIGSLLSILVAVIVPTICYLKIMGSEATKMQISSSIFVVGLGVV

Query:  SAIFGTYSSLSQIAD
        S   GTYS++S++A+
Subjt:  SAIFGTYSSLSQIAD

Q8LPF4 Amino acid transporter AVT1E1.4e-1543.48Show/hide
Query:  LLKYALLMNPLARSIEELLP--PRISNSYGCFILLRTALVISSVCVAFLLPFFGLVMALIGSLLSILVAVIVPTICYLKIMGSEATKMQISSSIFVVGLG
        + KYAL + P+  S+EEL+P   R   S G  +L RT LV+S++ VA  +PFF  V ALIGS +++L+A+I P +CY+ IM    T  QI   I +V +G
Subjt:  LLKYALLMNPLARSIEELLP--PRISNSYGCFILLRTALVISSVCVAFLLPFFGLVMALIGSLLSILVAVIVPTICYLKIMGSEATKMQISSSIFVVGLG

Query:  VVSAIFGTYSSLSQI
        +VS   GTYS+++++
Subjt:  VVSAIFGTYSSLSQI

Arabidopsis top hitse value%identityAlignment
AT2G39130.1 Transmembrane amino acid transporter family protein7.9e-1944.25Show/hide
Query:  KYALLMNPLARSIEELLPPRISNSYGCFILLRTALVISSVCVAFLLPFFGLVMALIGSLLSILVAVIVPTICYLKIMGSEATKMQISSSIFVVGLGVVSA
        KYAL ++P+A S+EEL+P R   S+   I +RT LV S++ V   +PFFGLVM+LIGSLL++LV +I+P  C+L I+  + T  Q+   + ++ +G +S+
Subjt:  KYALLMNPLARSIEELLPPRISNSYGCFILLRTALVISSVCVAFLLPFFGLVMALIGSLLSILVAVIVPTICYLKIMGSEATKMQISSSIFVVGLGVVSA

Query:  IFGTYSSLSQIAD
        + G+YS+LS+I +
Subjt:  IFGTYSSLSQIAD

AT2G41190.1 Transmembrane amino acid transporter family protein1.7e-3466.96Show/hide
Query:  KYALLMNPLARSIEELLPPRISNSYGCFILLRTALVISSVCVAFLLPFFGLVMALIGSLLSILVAVIVPTICYLKIMGSEATKMQISSSIFVVGLGVVSA
        KYALLMNPLARSIEELLP R+S +  CF+LLRTALV SSVC AFL+PFFGL+MALIGSLLSILVA+I+P +C++KIMG++AT+ Q+  S  +V +GVVS 
Subjt:  KYALLMNPLARSIEELLPPRISNSYGCFILLRTALVISSVCVAFLLPFFGLVMALIGSLLSILVAVIVPTICYLKIMGSEATKMQISSSIFVVGLGVVSA

Query:  IFGTYSSLSQIADSY
          GTYSS+++I  +Y
Subjt:  IFGTYSSLSQIADSY

AT3G09340.1 Transmembrane amino acid transporter family protein3.7e-1641.23Show/hide
Query:  LLKYALLMNPLARSIEELLPP-RISNSYGCFILLRTALVISSVCVAFLLPFFGLVMALIGSLLSILVAVIVPTICYLKIMGSEATKMQISSSIFVVGLGV
        + KYAL + P+   +EEL+PP     SYG  I ++T LV+S++ VA   PFF ++ AL+GS L+ LV  I P +CYL I+    +K QI   +F++  G+
Subjt:  LLKYALLMNPLARSIEELLPP-RISNSYGCFILLRTALVISSVCVAFLLPFFGLVMALIGSLLSILVAVIVPTICYLKIMGSEATKMQISSSIFVVGLGV

Query:  VSAIFGTYSSLSQI
        VS   GTYS++ ++
Subjt:  VSAIFGTYSSLSQI

AT5G02170.1 Transmembrane amino acid transporter family protein9.6e-1743.48Show/hide
Query:  LLKYALLMNPLARSIEELLP--PRISNSYGCFILLRTALVISSVCVAFLLPFFGLVMALIGSLLSILVAVIVPTICYLKIMGSEATKMQISSSIFVVGLG
        + KYAL + P+  S+EEL+P   R   S G  +L RT LV+S++ VA  +PFF  V ALIGS +++L+A+I P +CY+ IM    T  QI   I +V +G
Subjt:  LLKYALLMNPLARSIEELLP--PRISNSYGCFILLRTALVISSVCVAFLLPFFGLVMALIGSLLSILVAVIVPTICYLKIMGSEATKMQISSSIFVVGLG

Query:  VVSAIFGTYSSLSQI
        +VS   GTYS+++++
Subjt:  VVSAIFGTYSSLSQI

AT5G02180.1 Transmembrane amino acid transporter family protein2.1e-1946.96Show/hide
Query:  LLKYALLMNPLARSIEELLPPRISNSYGCFILLRTALVISSVCVAFLLPFFGLVMALIGSLLSILVAVIVPTICYLKIMGSEATKMQISSSIFVVGLGVV
        + KYAL + P+  S+EEL+P     S G  IL RT LV S++ VA  +PFF +V ALIGS L++LVA+I P +CYL I+  + +  QI   IF++  GVV
Subjt:  LLKYALLMNPLARSIEELLPPRISNSYGCFILLRTALVISSVCVAFLLPFFGLVMALIGSLLSILVAVIVPTICYLKIMGSEATKMQISSSIFVVGLGVV

Query:  SAIFGTYSSLSQIAD
        S   GTYS++S++A+
Subjt:  SAIFGTYSSLSQIAD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTAAATTTGCTTCCTTGACATTGCTCAAATATGCACTGTTGATGAATCCATTGGCAAGAAGCATAGAGGAGCTATTACCACCTAGAATTTCAAATAGCTACGGGTG
TTTCATTCTTCTAAGAACAGCACTGGTTATTTCTTCTGTTTGCGTGGCTTTCCTTCTGCCCTTTTTTGGTCTTGTGATGGCTTTGATTGGCTCCCTTCTCAGCATACTTG
TGGCGGTAATAGTGCCAACCATATGTTATTTAAAAATTATGGGAAGCGAAGCTACAAAAATGCAGATCAGTTCGAGCATCTTTGTCGTTGGACTTGGTGTCGTCAGTGCA
ATCTTCGGAACATATTCTTCTTTGTCACAGATTGCAGACAGTTACTGA
mRNA sequenceShow/hide mRNA sequence
ATGATTAAATTTGCTTCCTTGACATTGCTCAAATATGCACTGTTGATGAATCCATTGGCAAGAAGCATAGAGGAGCTATTACCACCTAGAATTTCAAATAGCTACGGGTG
TTTCATTCTTCTAAGAACAGCACTGGTTATTTCTTCTGTTTGCGTGGCTTTCCTTCTGCCCTTTTTTGGTCTTGTGATGGCTTTGATTGGCTCCCTTCTCAGCATACTTG
TGGCGGTAATAGTGCCAACCATATGTTATTTAAAAATTATGGGAAGCGAAGCTACAAAAATGCAGATCAGTTCGAGCATCTTTGTCGTTGGACTTGGTGTCGTCAGTGCA
ATCTTCGGAACATATTCTTCTTTGTCACAGATTGCAGACAGTTACTGA
Protein sequenceShow/hide protein sequence
MIKFASLTLLKYALLMNPLARSIEELLPPRISNSYGCFILLRTALVISSVCVAFLLPFFGLVMALIGSLLSILVAVIVPTICYLKIMGSEATKMQISSSIFVVGLGVVSA
IFGTYSSLSQIADSY