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Tan0002752 (gene) of Snake gourd v1 genome

Gene IDTan0002752
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG01:113087451..113087669
RNA-Seq ExpressionTan0002752
SyntenyTan0002752
Gene Ontology termsGO:0045168 - cell-cell signaling involved in cell fate commitment (biological process)
InterPro domainsIPR039316 - CLAVATA3/ESR (CLE)-related protein 25/26


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064426.1 hypothetical protein E6C27_scaffold255G001340 [Cucumis melo var. makuwa]1.9e-1172.22Show/hide
Query:  MEARLLLLMAVFTLLVSGESKATMGV----VDQLPPSKMQEKHRKQ---LPSPPLR-HSFNGLFASKRKVPN
        MEARLLLLMAV TLLVSG +KATMGV    VDQ P S MQEKHRK    L SPPLR H FN LFASKRK  N
Subjt:  MEARLLLLMAVFTLLVSGESKATMGV----VDQLPPSKMQEKHRKQ---LPSPPLR-HSFNGLFASKRKVPN

KAE8649873.1 hypothetical protein Csa_012848, partial [Cucumis sativus]2.5e-1163.77Show/hide
Query:  TLLVSGESKATMGV-----VDQLPPSKMQEKHRKQL----PSPPLRHSFNGLFASKRKVPNTSDPLHNR
        TLLVSG++KATMG      +DQ P S MQEKHRK L      PP  H FN LFASKRKVPNT DP+HNR
Subjt:  TLLVSGESKATMGV-----VDQLPPSKMQEKHRKQL----PSPPLRHSFNGLFASKRKVPNTSDPLHNR

KAG2666233.1 hypothetical protein I3760_15G047400 [Carya illinoinensis]4.6e-0547.83Show/hide
Query:  RLLLLMAVFTLLVSGESKATMGV-VDQLPPSKMQEKHRKQLPSPPLRHSFNGLFASKRKVPNTSDPLHN
        R L+ +A    LV  E +A + V V+ L P  MQEK +++     L+HSF+  F+SKRKVPN SDPLHN
Subjt:  RLLLLMAVFTLLVSGESKATMGV-VDQLPPSKMQEKHRKQLPSPPLRHSFNGLFASKRKVPNTSDPLHN

KAG6626451.1 hypothetical protein CIPAW_15G049200 [Carya illinoinensis]4.6e-0547.83Show/hide
Query:  RLLLLMAVFTLLVSGESKATMGV-VDQLPPSKMQEKHRKQLPSPPLRHSFNGLFASKRKVPNTSDPLHN
        R L+ +A    LV  E +A + V V+ L P  MQEK +++     L+HSF+  F+SKRKVPN SDPLHN
Subjt:  RLLLLMAVFTLLVSGESKATMGV-VDQLPPSKMQEKHRKQLPSPPLRHSFNGLFASKRKVPNTSDPLHN

KDP41663.1 hypothetical protein JCGZ_16070 [Jatropha curcas]4.1e-0649.32Show/hide
Query:  EARLLLLMAVFTLLVSGESKATMGV--VDQLPPSKMQEKHRKQLPSPPLRHSFNGLFASKRKVPNTSDPLHNR
        + ++++L+ +++LLVSGE + TM V   D   P + QEKH++      LR SF+ LF+SKRKVPN SDPLHNR
Subjt:  EARLLLLMAVFTLLVSGESKATMGV--VDQLPPSKMQEKHRKQLPSPPLRHSFNGLFASKRKVPNTSDPLHNR

TrEMBL top hitse value%identityAlignment
A0A067L375 Uncharacterized protein2.0e-0649.32Show/hide
Query:  EARLLLLMAVFTLLVSGESKATMGV--VDQLPPSKMQEKHRKQLPSPPLRHSFNGLFASKRKVPNTSDPLHNR
        + ++++L+ +++LLVSGE + TM V   D   P + QEKH++      LR SF+ LF+SKRKVPN SDPLHNR
Subjt:  EARLLLLMAVFTLLVSGESKATMGV--VDQLPPSKMQEKHRKQLPSPPLRHSFNGLFASKRKVPNTSDPLHNR

A0A0A0KZW1 Uncharacterized protein1.6e-1667.9Show/hide
Query:  MEARLLLLMAVFTLLVSGESKATMGV-----VDQLPPSKMQEKHRKQL----PSPPLRHSFNGLFASKRKVPNTSDPLHNR
        MEARLLLLMAV TLLVSG++KATMG      +DQ P S MQEKHRK L      PP  H FN LFASKRKVPNT DP+HNR
Subjt:  MEARLLLLMAVFTLLVSGESKATMGV-----VDQLPPSKMQEKHRKQL----PSPPLRHSFNGLFASKRKVPNTSDPLHNR

A0A1R3HJP1 Uncharacterized protein4.9e-0543.84Show/hide
Query:  LLLLMAVFTLLVSGESK-----ATMGVVDQLPPSKMQEKHRKQLPSPPLRHSFNGLFASKRKVPNTSDPLHNR
        +++L+ +F LLVSG+       A M V  Q          ++Q P   LRHSF+  F+SKR+VPN SDPLHNR
Subjt:  LLLLMAVFTLLVSGESK-----ATMGVVDQLPPSKMQEKHRKQLPSPPLRHSFNGLFASKRKVPNTSDPLHNR

A0A5D3D9C5 Uncharacterized protein9.3e-1272.22Show/hide
Query:  MEARLLLLMAVFTLLVSGESKATMGV----VDQLPPSKMQEKHRKQ---LPSPPLR-HSFNGLFASKRKVPN
        MEARLLLLMAV TLLVSG +KATMGV    VDQ P S MQEKHRK    L SPPLR H FN LFASKRK  N
Subjt:  MEARLLLLMAVFTLLVSGESKATMGV----VDQLPPSKMQEKHRKQ---LPSPPLR-HSFNGLFASKRKVPN

A0A6J5W5V2 Uncharacterized protein1.1e-0442.11Show/hide
Query:  LLLLMAVFTLLVSGESKATMGVVDQLPPSKMQEKHRKQLPSPP--------LRHSFNGLFASKRKVPNTSDPLHNR
        +L+++  F++LVSG  + TM +       + QE+H   +   P        LRHSF   F+SKRKVPN SDPLHNR
Subjt:  LLLLMAVFTLLVSGESKATMGVVDQLPPSKMQEKHRKQLPSPP--------LRHSFNGLFASKRKVPNTSDPLHNR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGCTCGGTTGCTTCTGTTAATGGCAGTTTTCACTCTTCTGGTCTCCGGGGAAAGCAAAGCGACAATGGGGGTCGTCGATCAACTTCCGCCGTCAAAAATGCAGGA
GAAGCACCGGAAGCAGCTGCCGTCGCCTCCGTTGAGACACTCATTCAATGGGCTCTTTGCAAGCAAGAGGAAGGTCCCAAATACTTCGGATCCACTCCATAATCGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGCTCGGTTGCTTCTGTTAATGGCAGTTTTCACTCTTCTGGTCTCCGGGGAAAGCAAAGCGACAATGGGGGTCGTCGATCAACTTCCGCCGTCAAAAATGCAGGA
GAAGCACCGGAAGCAGCTGCCGTCGCCTCCGTTGAGACACTCATTCAATGGGCTCTTTGCAAGCAAGAGGAAGGTCCCAAATACTTCGGATCCACTCCATAATCGTTGA
Protein sequenceShow/hide protein sequence
MEARLLLLMAVFTLLVSGESKATMGVVDQLPPSKMQEKHRKQLPSPPLRHSFNGLFASKRKVPNTSDPLHNR