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Tan0002754 (gene) of Snake gourd v1 genome

Gene IDTan0002754
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionLYR motif-containing protein 2
Genome locationLG01:116108895..116109946
RNA-Seq ExpressionTan0002754
SyntenyTan0002754
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591251.1 LYR motif-containing protein 2, partial [Cucurbita argyrosperma subsp. sororia]7.9e-3090.12Show/hide
Query:  MVLSFDLQEFILRARVLKLYRQALRTARKAPVNGREELRHTIRQEMENNRSCNDRQKVRFLLSEGIERLKRLDEMLDMQGN
        MVL+ DLQEFILRARVLKLYRQALRT RKAPV+ REELRHTIRQEMENNRSC+DRQKVRFLLSEG+ERLKRLDEMLDMQG+
Subjt:  MVLSFDLQEFILRARVLKLYRQALRTARKAPVNGREELRHTIRQEMENNRSCNDRQKVRFLLSEGIERLKRLDEMLDMQGN
XP_022936861.1 uncharacterized protein LOC111443321 [Cucurbita moschata]1.0e-2990.12Show/hide
Query:  MVLSFDLQEFILRARVLKLYRQALRTARKAPVNGREELRHTIRQEMENNRSCNDRQKVRFLLSEGIERLKRLDEMLDMQGN
        MVL+ DLQEFILRARVLKLYRQALRT RKAPV+ REELRHTIRQEMENNR C+DRQKVRFLLSEGIERLKRLDEMLDMQG+
Subjt:  MVLSFDLQEFILRARVLKLYRQALRTARKAPVNGREELRHTIRQEMENNRSCNDRQKVRFLLSEGIERLKRLDEMLDMQGN
XP_022941069.1 uncharacterized protein LOC111446466 [Cucurbita moschata]1.0e-2990.12Show/hide
Query:  MVLSFDLQEFILRARVLKLYRQALRTARKAPVNGREELRHTIRQEMENNRSCNDRQKVRFLLSEGIERLKRLDEMLDMQGN
        MVLS DLQEFILRARVLKLYR ALRTA+KAPV+ REELRHTIRQEMENNR CN+RQKVRFLLSEGIERLKRL+EMLDMQGN
Subjt:  MVLSFDLQEFILRARVLKLYRQALRTARKAPVNGREELRHTIRQEMENNRSCNDRQKVRFLLSEGIERLKRLDEMLDMQGN
XP_023524988.1 uncharacterized protein LOC111788747 [Cucurbita pepo subsp. pepo]1.0e-2990.12Show/hide
Query:  MVLSFDLQEFILRARVLKLYRQALRTARKAPVNGREELRHTIRQEMENNRSCNDRQKVRFLLSEGIERLKRLDEMLDMQGN
        MVL  DLQEFILRARVLKLYRQALRTA+KAPV+ REELRHTIRQEMENNR CN+RQKVRFLLSEGIERLKRL+EMLDMQGN
Subjt:  MVLSFDLQEFILRARVLKLYRQALRTARKAPVNGREELRHTIRQEMENNRSCNDRQKVRFLLSEGIERLKRLDEMLDMQGN
XP_023535371.1 uncharacterized protein LOC111796833 [Cucurbita pepo subsp. pepo]3.5e-3091.36Show/hide
Query:  MVLSFDLQEFILRARVLKLYRQALRTARKAPVNGREELRHTIRQEMENNRSCNDRQKVRFLLSEGIERLKRLDEMLDMQGN
        MVL+ DLQEFILRARVLKLYRQALRT RKAPV+ REELRHTIRQEMENNRSC+DRQKVRFLLSEGIERLKRLDEMLDMQG+
Subjt:  MVLSFDLQEFILRARVLKLYRQALRTARKAPVNGREELRHTIRQEMENNRSCNDRQKVRFLLSEGIERLKRLDEMLDMQGN
TrEMBL top hitse value%identityAlignment
A0A6J1CHJ1 uncharacterized protein LOC1110112187.2e-2986.42Show/hide
Query:  MVLSFDLQEFILRARVLKLYRQALRTARKAPVNGREELRHTIRQEMENNRSCNDRQKVRFLLSEGIERLKRLDEMLDMQGN
        MV+S DL EFILRARVLKL+RQALRTARKAPV+ REELRHTIRQEMENNRSCND+QKVR+L+SEGIE LKRLDEMLDMQG+
Subjt:  MVLSFDLQEFILRARVLKLYRQALRTARKAPVNGREELRHTIRQEMENNRSCNDRQKVRFLLSEGIERLKRLDEMLDMQGN
A0A6J1F8N3 uncharacterized protein LOC1114433215.0e-3090.12Show/hide
Query:  MVLSFDLQEFILRARVLKLYRQALRTARKAPVNGREELRHTIRQEMENNRSCNDRQKVRFLLSEGIERLKRLDEMLDMQGN
        MVL+ DLQEFILRARVLKLYRQALRT RKAPV+ REELRHTIRQEMENNR C+DRQKVRFLLSEGIERLKRLDEMLDMQG+
Subjt:  MVLSFDLQEFILRARVLKLYRQALRTARKAPVNGREELRHTIRQEMENNRSCNDRQKVRFLLSEGIERLKRLDEMLDMQGN
A0A6J1FM54 uncharacterized protein LOC1114464665.0e-3090.12Show/hide
Query:  MVLSFDLQEFILRARVLKLYRQALRTARKAPVNGREELRHTIRQEMENNRSCNDRQKVRFLLSEGIERLKRLDEMLDMQGN
        MVLS DLQEFILRARVLKLYR ALRTA+KAPV+ REELRHTIRQEMENNR CN+RQKVRFLLSEGIERLKRL+EMLDMQGN
Subjt:  MVLSFDLQEFILRARVLKLYRQALRTARKAPVNGREELRHTIRQEMENNRSCNDRQKVRFLLSEGIERLKRLDEMLDMQGN
A0A6J1IFA5 uncharacterized protein LOC1114764181.4e-2988.89Show/hide
Query:  MVLSFDLQEFILRARVLKLYRQALRTARKAPVNGREELRHTIRQEMENNRSCNDRQKVRFLLSEGIERLKRLDEMLDMQGN
        MVL+ DLQEFILRARVLKLYRQALRT RKAPV+ REELRHTIRQEMENNRSC+DRQK+RFLLSEG ERLKRLDEMLDMQG+
Subjt:  MVLSFDLQEFILRARVLKLYRQALRTARKAPVNGREELRHTIRQEMENNRSCNDRQKVRFLLSEGIERLKRLDEMLDMQGN
A0A6J1IY12 uncharacterized protein LOC1114809624.7e-2887.65Show/hide
Query:  MVLSFDLQEFILRARVLKLYRQALRTARKAPVNGREELRHTIRQEMENNRSCNDRQKVRFLLSEGIERLKRLDEMLDMQGN
        MVLS DLQEFILRARVLKLYRQALR A+KAPV+ REELR  IRQEMENNR CN+RQKVRFLLSEGIERLKRL+EMLDMQGN
Subjt:  MVLSFDLQEFILRARVLKLYRQALRTARKAPVNGREELRHTIRQEMENNRSCNDRQKVRFLLSEGIERLKRLDEMLDMQGN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G76065.1 LYR family of Fe/S cluster biogenesis protein2.8e-2568.75Show/hide
Query:  VLSFDLQEFILRARVLKLYRQALRTARKAPVNGREELRHTIRQEMENNRSCNDRQKVRFLLSEGIERLKRLDEMLDMQGN
        ++  DLQ FILRARVLKLYRQAL+ A +APV+ R EL+ T+RQEME NR CND+QK+R+L+SEG+ER+K LDEMLDMQG+
Subjt:  VLSFDLQEFILRARVLKLYRQALRTARKAPVNGREELRHTIRQEMENNRSCNDRQKVRFLLSEGIERLKRLDEMLDMQGN

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCTCTCCTTTGATTTACAGGAATTTATTCTCCGGGCAAGGGTGTTGAAACTGTACAGACAGGCTTTAAGAACTGCTCGAAAAGCTCCTGTTAACGGTCGAGAGGA
ACTGCGGCATACAATCAGACAAGAAATGGAAAACAACCGGAGCTGCAATGACAGACAGAAAGTAAGATTTCTGCTGAGTGAAGGAATAGAGAGATTGAAGCGTTTAGATG
AGATGTTGGATATGCAGGGTAATTAA
mRNA sequenceShow/hide mRNA sequence
GCTTTCTCCAGATCGTCGTCTTAATTCAAGACCTTAGAACTTAGAACTCAGAACTGAACGACAGAAATAGTTAATCGTCCGATTGAATAAGAAATGGAATTCACTGCAGT
GGACTCGACGAACTGGTATTAGCCTCTTCTCTTTGTCTTCTACGGAAGAGAACTCGCCATGGTTCTCTCCTTTGATTTACAGGAATTTATTCTCCGGGCAAGGGTGTTGA
AACTGTACAGACAGGCTTTAAGAACTGCTCGAAAAGCTCCTGTTAACGGTCGAGAGGAACTGCGGCATACAATCAGACAAGAAATGGAAAACAACCGGAGCTGCAATGAC
AGACAGAAAGTAAGATTTCTGCTGAGTGAAGGAATAGAGAGATTGAAGCGTTTAGATGAGATGTTGGATATGCAGGGTAATTAATAAAGATAATAAGCTAATTTATCTTT
TTGATCTATCGGCCGTTGTAATTTAAATGTTCAGAGTGAATTTGGAAGGAAGGATTAATCTTTCCTTGATCATTCAATAATTGTAGCTATTGGGATTATTAATCAATCTT
TTAAAATTTCTGTTGCTTTAGTATGATATTGAGAC
Protein sequenceShow/hide protein sequence
MVLSFDLQEFILRARVLKLYRQALRTARKAPVNGREELRHTIRQEMENNRSCNDRQKVRFLLSEGIERLKRLDEMLDMQGN