CuGenDBv2

Gene ID	Tan0002764
Organism	Trichosanthes anguina (Snake gourd v1)
Description	U3 small nucleolar ribonucleoprotein protein IMP4
Genome location	LG11:14559819..14579075
RNA-Seq Expression	Tan0002764
Synteny	Tan0002764
Gene Ontology terms	GO:0006364 - rRNA processing (biological process) GO:0016363 - nuclear matrix (cellular component) GO:0032040 - small-subunit processome (cellular component) GO:0034457 - Mpp10 complex (cellular component) GO:0003729 - mRNA binding (molecular function) GO:0030515 - snoRNA binding (molecular function) GO:0042134 - rRNA primary transcript binding (molecular function)
InterPro domains	IPR007109 - Brix domain IPR044281 - U3 snoRNP protein/Ribosome production factor 1

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6579112.1 U3 small nucleolar ribonucleoprotein IMP4, partial [Cucurbita argyrosperma subsp. sororia]

1.1e-158

96.25

Show/hide

Query:  MLRRNIRLRREYLYRKSLEGKDRLLYEKKRKIREALEEGKPIPTELRNEEATLRKEIELEDDHTSVPRTLIDDEYANASEIDPKILITTSRDPSAPLTQF
        MLRRNIRLRREYLYRKSLEGK+RLLYEKKRKIREALEEGKP PTELRNEEA LRKEIELEDD T+VPRT IDDEYANAS+IDPKILITTSRDPSAPLTQF
Subjt:  MLRRNIRLRREYLYRKSLEGKDRLLYEKKRKIREALEEGKPIPTELRNEEATLRKEIELEDDHTSVPRTLIDDEYANASEIDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
        AKELKIVFPNAQRMNRGGQVI+EIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
Subjt:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANILKHLFPVPKPDTKRVVTFANQSDYVSFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD
        RTAN+LKHLFPVPKPDTKRVVTFANQSDY+SFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKR+FLGD
Subjt:  RTANILKHLFPVPKPDTKRVVTFANQSDYVSFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD

KAG7016636.1 U3 small nucleolar ribonucleoprotein IMP4, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.1e-158

96.25

Show/hide

Query:  MLRRNIRLRREYLYRKSLEGKDRLLYEKKRKIREALEEGKPIPTELRNEEATLRKEIELEDDHTSVPRTLIDDEYANASEIDPKILITTSRDPSAPLTQF
        MLRRNIRLRREYLYRKSLEGK+RLLYEKKRKIREALEEGKP PTELRNEEA LRKEIELEDD T+VPRT IDDEYANAS+IDPKILITTSRDPSAPLTQF
Subjt:  MLRRNIRLRREYLYRKSLEGKDRLLYEKKRKIREALEEGKPIPTELRNEEATLRKEIELEDDHTSVPRTLIDDEYANASEIDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
        AKELKIVFPNAQRMNRGGQVI+EIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
Subjt:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANILKHLFPVPKPDTKRVVTFANQSDYVSFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD
        RTAN+LKHLFPVPKPDTKRVVTFANQSDY+SFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKR+FLGD
Subjt:  RTANILKHLFPVPKPDTKRVVTFANQSDYVSFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD

XP_022157893.1 U3 small nucleolar ribonucleoprotein protein IMP4 [Momordica charantia]

1.1e-158

95.9

Show/hide

Query:  MLRRNIRLRREYLYRKSLEGKDRLLYEKKRKIREALEEGKPIPTELRNEEATLRKEIELEDDHTSVPRTLIDDEYANASEIDPKILITTSRDPSAPLTQF
        MLRRNIRLRREYLYRKSLEGK+RLLYEKKRKIREALEEGKPIPTELRNEEA LRKEIELEDD+T+VPRT IDDEYAN SE+DPKILITTSRDPSAPLTQF
Subjt:  MLRRNIRLRREYLYRKSLEGKDRLLYEKKRKIREALEEGKPIPTELRNEEATLRKEIELEDDHTSVPRTLIDDEYANASEIDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
        AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLI+SHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
Subjt:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANILKHLFPVPKPDTKRVVTFANQSDYVSFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD
        RTANILKHLFPVPKPDTKRV+TFANQSDY+SFRHHIYEK GG KSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD
Subjt:  RTANILKHLFPVPKPDTKRVVTFANQSDYVSFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD

XP_022939256.1 U3 small nucleolar ribonucleoprotein protein IMP4 [Cucurbita moschata]

1.1e-158

96.25

Show/hide

Query:  MLRRNIRLRREYLYRKSLEGKDRLLYEKKRKIREALEEGKPIPTELRNEEATLRKEIELEDDHTSVPRTLIDDEYANASEIDPKILITTSRDPSAPLTQF
        MLRRNIRLRREYLYRKSLEGK+RLLYEKKRKIREALEEGKP PTELRNEEA LRKEIELEDD T+VPRT IDDEYANAS+IDPKILITTSRDPSAPLTQF
Subjt:  MLRRNIRLRREYLYRKSLEGKDRLLYEKKRKIREALEEGKPIPTELRNEEATLRKEIELEDDHTSVPRTLIDDEYANASEIDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
        AKELKIVFPNAQRMNRGGQVI+EIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
Subjt:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANILKHLFPVPKPDTKRVVTFANQSDYVSFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD
        RTAN+LKHLFPVPKPDTKRVVTFANQSDY+SFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKR+FLGD
Subjt:  RTANILKHLFPVPKPDTKRVVTFANQSDYVSFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD

XP_022993779.1 U3 small nucleolar ribonucleoprotein protein IMP4 [Cucurbita maxima]

9.4e-158

95.9

Show/hide

Query:  MLRRNIRLRREYLYRKSLEGKDRLLYEKKRKIREALEEGKPIPTELRNEEATLRKEIELEDDHTSVPRTLIDDEYANASEIDPKILITTSRDPSAPLTQF
        MLRRNIRLRREYLYRKSLEGK+RLLYEKKRKIREALEEGKP PTELRNEEA LRKEIELEDD T+VPRT IDDEYANAS+IDPKILITTSRDPSAPLTQF
Subjt:  MLRRNIRLRREYLYRKSLEGKDRLLYEKKRKIREALEEGKPIPTELRNEEATLRKEIELEDDHTSVPRTLIDDEYANASEIDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
        AKELKIVFPNAQRMNRGGQVI+EIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
Subjt:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANILKHLFPVPKPDTKRVVTFANQSDYVSFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD
        RTAN+LKHLFPVPKPDTKRVVTFANQSDY+SFRHHIYEK GGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKR+FLGD
Subjt:  RTANILKHLFPVPKPDTKRVVTFANQSDYVSFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CPI1 U3 small nucleolar ribonucleoprotein protein IMP4

6.0e-158

96.23

Show/hide

Query:  MLRRNIRLRREYLYRKSLEGKDRLLYEKKRKIREALEEGKPIPTELRNEEATLRKEIELEDDHTSVPRTLIDDEYANASEIDPKILITTSRDPSAPLTQF
        MLRRNIRLRREYLYRKSLEGK+RLLYEKKRKIREALEEGKP PTELRNEEA LRKEIELED+ T+VPRT IDDEYANASE+DPKILITTSRDPSAPLTQF
Subjt:  MLRRNIRLRREYLYRKSLEGKDRLLYEKKRKIREALEEGKPIPTELRNEEATLRKEIELEDDHTSVPRTLIDDEYANASEIDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
        AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEI+DKKAMGTMPEAYPHIILNNFTTKLGE
Subjt:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANILKHLFPVPKPDTKRVVTFANQSDYVSFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLG
        RTANILKHLFPVPKPDTKRVVTFANQSDY+SFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKR FLG
Subjt:  RTANILKHLFPVPKPDTKRVVTFANQSDYVSFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLG

A0A5D3BJ53 U3 small nucleolar ribonucleoprotein IMP4

6.0e-158

96.23

Show/hide

Query:  MLRRNIRLRREYLYRKSLEGKDRLLYEKKRKIREALEEGKPIPTELRNEEATLRKEIELEDDHTSVPRTLIDDEYANASEIDPKILITTSRDPSAPLTQF
        MLRRNIRLRREYLYRKSLEGK+RLLYEKKRKIREALEEGKP PTELRNEEA LRKEIELED+ T+VPRT IDDEYANASE+DPKILITTSRDPSAPLTQF
Subjt:  MLRRNIRLRREYLYRKSLEGKDRLLYEKKRKIREALEEGKPIPTELRNEEATLRKEIELEDDHTSVPRTLIDDEYANASEIDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
        AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEI+DKKAMGTMPEAYPHIILNNFTTKLGE
Subjt:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANILKHLFPVPKPDTKRVVTFANQSDYVSFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLG
        RTANILKHLFPVPKPDTKRVVTFANQSDY+SFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKR FLG
Subjt:  RTANILKHLFPVPKPDTKRVVTFANQSDYVSFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLG

A0A6J1DUL2 U3 small nucleolar ribonucleoprotein protein IMP4

5.4e-159

95.9

Show/hide

Query:  MLRRNIRLRREYLYRKSLEGKDRLLYEKKRKIREALEEGKPIPTELRNEEATLRKEIELEDDHTSVPRTLIDDEYANASEIDPKILITTSRDPSAPLTQF
        MLRRNIRLRREYLYRKSLEGK+RLLYEKKRKIREALEEGKPIPTELRNEEA LRKEIELEDD+T+VPRT IDDEYAN SE+DPKILITTSRDPSAPLTQF
Subjt:  MLRRNIRLRREYLYRKSLEGKDRLLYEKKRKIREALEEGKPIPTELRNEEATLRKEIELEDDHTSVPRTLIDDEYANASEIDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
        AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLI+SHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
Subjt:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANILKHLFPVPKPDTKRVVTFANQSDYVSFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD
        RTANILKHLFPVPKPDTKRV+TFANQSDY+SFRHHIYEK GG KSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD
Subjt:  RTANILKHLFPVPKPDTKRVVTFANQSDYVSFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD

A0A6J1FFE4 U3 small nucleolar ribonucleoprotein protein IMP4

5.4e-159

96.25

Show/hide

Query:  MLRRNIRLRREYLYRKSLEGKDRLLYEKKRKIREALEEGKPIPTELRNEEATLRKEIELEDDHTSVPRTLIDDEYANASEIDPKILITTSRDPSAPLTQF
        MLRRNIRLRREYLYRKSLEGK+RLLYEKKRKIREALEEGKP PTELRNEEA LRKEIELEDD T+VPRT IDDEYANAS+IDPKILITTSRDPSAPLTQF
Subjt:  MLRRNIRLRREYLYRKSLEGKDRLLYEKKRKIREALEEGKPIPTELRNEEATLRKEIELEDDHTSVPRTLIDDEYANASEIDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
        AKELKIVFPNAQRMNRGGQVI+EIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
Subjt:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANILKHLFPVPKPDTKRVVTFANQSDYVSFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD
        RTAN+LKHLFPVPKPDTKRVVTFANQSDY+SFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKR+FLGD
Subjt:  RTANILKHLFPVPKPDTKRVVTFANQSDYVSFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD

A0A6J1K117 U3 small nucleolar ribonucleoprotein protein IMP4

4.6e-158

95.9

Show/hide

Query:  MLRRNIRLRREYLYRKSLEGKDRLLYEKKRKIREALEEGKPIPTELRNEEATLRKEIELEDDHTSVPRTLIDDEYANASEIDPKILITTSRDPSAPLTQF
        MLRRNIRLRREYLYRKSLEGK+RLLYEKKRKIREALEEGKP PTELRNEEA LRKEIELEDD T+VPRT IDDEYANAS+IDPKILITTSRDPSAPLTQF
Subjt:  MLRRNIRLRREYLYRKSLEGKDRLLYEKKRKIREALEEGKPIPTELRNEEATLRKEIELEDDHTSVPRTLIDDEYANASEIDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
        AKELKIVFPNAQRMNRGGQVI+EIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
Subjt:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANILKHLFPVPKPDTKRVVTFANQSDYVSFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD
        RTAN+LKHLFPVPKPDTKRVVTFANQSDY+SFRHHIYEK GGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKR+FLGD
Subjt:  RTANILKHLFPVPKPDTKRVVTFANQSDYVSFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD

SwissProt top hits

e value

%identity

Alignment

Q0VD01 U3 small nucleolar ribonucleoprotein protein IMP4

4.1e-87

55.48

Show/hide

Query:  MLRRNIRLRREYLYRKSLEGKDRLLYEKKRKIREALEEGKPIPTELRNEEATLRKEIELEDDHTSVPRTLIDDEYANASEIDPKILITTSRDPSAPLTQF
        MLRR  RLRREYLYRK+ E  +R   E+K K+R ALEE + IPTELR E   L+  +E +D         +DDEY  A   DPK++ITTSRDPS+ L  F
Subjt:  MLRRNIRLRREYLYRKSLEGKDRLLYEKKRKIREALEEGKPIPTELRNEEATLRKEIELEDDHTSVPRTLIDDEYANASEIDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
        AKELK+VFP AQRMNRG   +  ++  C+A+  TD+++VHEHRG P GLI+SHLPFGPTAYF L NVV RH+I D   +GT  EA PH+I++ F+++LG+
Subjt:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANILKHLFPVPKPDTKRVVTFANQSDYVSFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQ-TEAQNEWVIRPYMKTTKKRKFL
        R ++IL++LFPVPK D++RV+TFANQ DY+SFRHH+Y+K    +++EL E+GPRFEL+LY I+LGT++Q   A  EW   PY  T  KR FL
Subjt:  RTANILKHLFPVPKPDTKRVVTFANQSDYVSFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQ-TEAQNEWVIRPYMKTTKKRKFL

Q5PQR5 U3 small nucleolar ribonucleoprotein protein IMP4

4.1e-87

55.48

Show/hide

Query:  MLRRNIRLRREYLYRKSLEGKDRLLYEKKRKIREALEEGKPIPTELRNEEATLRKEIELEDDHTSVPRTLIDDEYANASEIDPKILITTSRDPSAPLTQF
        MLRR  RLRREYLYRK+ E   R + EKK +++ ALEE + IPTELR E   L+  +E +D       + +DDEY  A   DPK++ITTSRDPS+ L  F
Subjt:  MLRRNIRLRREYLYRKSLEGKDRLLYEKKRKIREALEEGKPIPTELRNEEATLRKEIELEDDHTSVPRTLIDDEYANASEIDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
        AKELK+VFP AQRMNRG   +  ++  C+A+  TD+++VHEHRG P GLI+SHLPFGPTAYF L NVV RH+I D   +GTM EA PH+I + F+++LG+
Subjt:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANILKHLFPVPKPDTKRVVTFANQSDYVSFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQ-TEAQNEWVIRPYMKTTKKRKFL
        R ++IL++LFPVPK D+ RV+TFANQ DY+SFRHH+Y+K    +++EL E+GPRFEL+LY I+LGT++Q   A  EW   PY  T +KR FL
Subjt:  RTANILKHLFPVPKPDTKRVVTFANQSDYVSFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQ-TEAQNEWVIRPYMKTTKKRKFL

Q5R947 U3 small nucleolar ribonucleoprotein protein IMP4

6.9e-87

55.48

Show/hide

Query:  MLRRNIRLRREYLYRKSLEGKDRLLYEKKRKIREALEEGKPIPTELRNEEATLRKEIELEDDHTSVPRTLIDDEYANASEIDPKILITTSRDPSAPLTQF
        MLRR  RLRREYLYRK+ E   R   E+K ++R ALEE + IPTELR E   L+  +E +D       + +DDEY  A   DPK++ITTSRDPS+ L  F
Subjt:  MLRRNIRLRREYLYRKSLEGKDRLLYEKKRKIREALEEGKPIPTELRNEEATLRKEIELEDDHTSVPRTLIDDEYANASEIDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
        AKELK+VFP AQRMNRG   +  ++  C+A+  TD+++VHEHRG P GLI+SHLPFGPTAYF L NVV RH+I D   +GTM EA PH+I + F+++LG+
Subjt:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANILKHLFPVPKPDTKRVVTFANQSDYVSFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQ-TEAQNEWVIRPYMKTTKKRKFL
        R ++IL++LFPVPK D+ RV+TFANQ DY+SFRHH+Y+K    +++EL E+GPRFEL+LY I+LGT++Q   A  EW   PY  T +KR FL
Subjt:  RTANILKHLFPVPKPDTKRVVTFANQSDYVSFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQ-TEAQNEWVIRPYMKTTKKRKFL

Q8VHZ7 U3 small nucleolar ribonucleoprotein protein IMP4

4.1e-87

55.48

Show/hide

Query:  MLRRNIRLRREYLYRKSLEGKDRLLYEKKRKIREALEEGKPIPTELRNEEATLRKEIELEDDHTSVPRTLIDDEYANASEIDPKILITTSRDPSAPLTQF
        MLRR  RLRREYLYRK+ E   R + EKK +++ ALEE + IPTELR E   L+  +E +D       + +DDEY  A   DPK++ITTSRDPS+ L  F
Subjt:  MLRRNIRLRREYLYRKSLEGKDRLLYEKKRKIREALEEGKPIPTELRNEEATLRKEIELEDDHTSVPRTLIDDEYANASEIDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
        AKELK+VFP AQRMNRG   +  ++  C+A+  TD+++VHEHRG P GLI+SHLPFGPTAYF L NVV RH+I D   +GTM EA PH+I + F+++LG+
Subjt:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANILKHLFPVPKPDTKRVVTFANQSDYVSFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQ-TEAQNEWVIRPYMKTTKKRKFL
        R ++IL++LFPVPK D+ RV+TFANQ DY+SFRHH+Y+K    +++EL E+GPRFEL+LY I+LGT++Q   A  EW   PY  T +KR FL
Subjt:  RTANILKHLFPVPKPDTKRVVTFANQSDYVSFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQ-TEAQNEWVIRPYMKTTKKRKFL

Q96G21 U3 small nucleolar ribonucleoprotein protein IMP4

6.9e-87

55.48

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Query:  MLRRNIRLRREYLYRKSLEGKDRLLYEKKRKIREALEEGKPIPTELRNEEATLRKEIELEDDHTSVPRTLIDDEYANASEIDPKILITTSRDPSAPLTQF
        MLRR  RLRREYLYRK+ E   R   E+K ++R ALEE + IPTELR E   L+  +E +D       + +DDEY  A   DPK++ITTSRDPS+ L  F
Subjt:  MLRRNIRLRREYLYRKSLEGKDRLLYEKKRKIREALEEGKPIPTELRNEEATLRKEIELEDDHTSVPRTLIDDEYANASEIDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
        AKELK+VFP AQRMNRG   +  ++  C+A+  TD+++VHEHRG P GLI+SHLPFGPTAYF L NVV RH+I D   +GTM EA PH+I + F+++LG+
Subjt:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANILKHLFPVPKPDTKRVVTFANQSDYVSFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQ-TEAQNEWVIRPYMKTTKKRKFL
        R ++IL++LFPVPK D+ RV+TFANQ DY+SFRHH+Y+K    +++EL E+GPRFEL+LY I+LGT++Q   A  EW   PY  T +KR FL
Subjt:  RTANILKHLFPVPKPDTKRVVTFANQSDYVSFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQ-TEAQNEWVIRPYMKTTKKRKFL

Arabidopsis top hits

e value

%identity

Alignment

AT1G63780.1 Ribosomal RNA processing Brix domain protein

1.2e-131

75.85

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Query:  MLRRNIRLRREYLYRKSLEGKDRLLYEKKRKIREALEEGKPIPTELRNEEATLRKEIELEDDHTSVPRTLIDDEYANASEIDPKILITTSRDPSAPLTQF
        M RR +RL++EY+YRKSLEG +R +YE+KR IREAL+EGKPIPTELRN EA LR+EI+LED +T+VPR+ IDDEYANA+E DPKIL+TTSR+PSAPL +F
Subjt:  MLRRNIRLRREYLYRKSLEGKDRLLYEKKRKIREALEEGKPIPTELRNEEATLRKEIELEDDHTSVPRTLIDDEYANASEIDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
         KELK VFPN+QR+NRG QVISEIIET R+H+FTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRH+I DKK++G MPE YPH+I NNFTT++G+
Subjt:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANILKHLFPVPKPDTKRVVTFANQSDYVSFRHHIYEK-HGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD
        R  NILKH+FP PK D KR+VTF+NQSDY+SFR+H+Y+K  GG KSIELKEIGPRFELRLYQ+KLGTV+Q EA+ EWVIRPYM T+KKRKF+G+
Subjt:  RTANILKHLFPVPKPDTKRVVTFANQSDYVSFRHHIYEK-HGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD

AT4G01560.1 Ribosomal RNA processing Brix domain protein

1.8e-37

35.83

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Query:  RREYLYRKSLEGKDRLLYEKKRKIR-------EALEEG-----KPIPTELRNEEATLRKEIELEDDHTSVPRTLIDDEYANASEIDPKILITTSRDPSAP
        +R  +Y K    K     EK++KIR        ALE G     K IP  + N   +       +D+         +       EI PK+L+TT R  S  
Subjt:  RREYLYRKSLEGKDRLLYEKKRKIR-------EALEEG-----KPIPTELRNEEATLRKEIELEDDHTSVPRTLIDDEYANASEIDPKILITTSRDPSAP

Query:  LTQFAKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTT
              EL  V PN+    RG   + +I+E     +FT +I+VH +R  PD L+I  LP GPTA+F L N+V R +IK+    G      P ++LNNFTT
Subjt:  LTQFAKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTT

Query:  KLGERTANILKHLFPVPKPD--TKRVVTFANQSDYVSFRHHIY--------EKHGGAKSIE--LKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKT
        +LG R     + LFP P P+   +RVVTF NQ D++ FRHH Y           G  ++I+  L+E GPRF L+L  ++ GT D    + EWV +P M T
Subjt:  KLGERTANILKHLFPVPKPD--TKRVVTFANQSDYVSFRHHIY--------EKHGGAKSIE--LKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKT

Query:  TKKRKFL
        +++R FL
Subjt:  TKKRKFL

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTTGCGAAGAAACATTCGACTGAGGAGGGAGTATTTGTACCGAAAGAGTTTAGAGGGCAAGGATCGTTTGCTCTATGAGAAGAAGCGAAAGATTAGAGAAGCCCTTGA
AGAGGGAAAACCCATTCCTACTGAACTCCGTAATGAGGAGGCAACACTTCGTAAAGAAATTGAACTCGAAGATGATCACACGTCAGTCCCTAGGACACTCATTGATGATG
AGTATGCGAATGCTTCAGAAATTGATCCTAAAATTTTGATTACTACATCTCGGGATCCAAGTGCACCTTTGACACAGTTTGCAAAGGAATTGAAAATTGTTTTTCCCAAT
GCTCAACGAATGAACCGTGGTGGTCAGGTGATCTCAGAGATTATAGAGACCTGCCGTGCTCACGAATTTACAGATGTTATTTTAGTTCATGAACATCGTGGCGTGCCAGA
TGGTTTAATTATCAGCCATCTTCCTTTTGGTCCAACTGCATATTTTGGATTGTTGAATGTGGTTACCCGACATGAAATTAAGGACAAAAAAGCTATGGGAACGATGCCTG
AGGCATATCCGCACATAATTTTGAACAATTTTACAACGAAGTTGGGTGAAAGGACGGCCAACATCTTAAAGCATCTATTTCCTGTGCCGAAGCCAGATACCAAACGTGTG
GTTACTTTTGCTAATCAATCTGACTATGTTTCATTCAGGCATCATATTTATGAGAAGCATGGAGGTGCTAAATCAATTGAGCTGAAGGAGATCGGTCCTCGGTTTGAATT
GCGACTGTATCAGATAAAGTTGGGAACTGTTGATCAAACGGAAGCTCAAAATGAATGGGTGATTAGACCATATATGAAAACAACCAAGAAACGCAAGTTCCTTGGTGATT
GA

mRNA sequence

Show/hide mRNA sequence

CCTCCCTTAAACCCTTTGCATCCCCCTCAATCACGTGCCCCACCTTGTTCTTCTCCTTCAGCTGGTTCTTCTCCCTTTCAGCAGCTCAGCGTCGTCGTTGCTCTCCGGTT
TAGTGCCGCCGTTGCCGTCTTTCTTCCGCTCGTGCCACTGCAGCCTGCCTCGTAGGGGCTTGCACTGATTGTCTGCTCTCTCGTTGGCACTGACTCTAGGTGGGGGTTTG
ACACAAATAGACTTGAGCAATGTTGCGAAGAAACATTCGACTGAGGAGGGAGTATTTGTACCGAAAGAGTTTAGAGGGCAAGGATCGTTTGCTCTATGAGAAGAAGCGAA
AGATTAGAGAAGCCCTTGAAGAGGGAAAACCCATTCCTACTGAACTCCGTAATGAGGAGGCAACACTTCGTAAAGAAATTGAACTCGAAGATGATCACACGTCAGTCCCT
AGGACACTCATTGATGATGAGTATGCGAATGCTTCAGAAATTGATCCTAAAATTTTGATTACTACATCTCGGGATCCAAGTGCACCTTTGACACAGTTTGCAAAGGAATT
GAAAATTGTTTTTCCCAATGCTCAACGAATGAACCGTGGTGGTCAGGTGATCTCAGAGATTATAGAGACCTGCCGTGCTCACGAATTTACAGATGTTATTTTAGTTCATG
AACATCGTGGCGTGCCAGATGGTTTAATTATCAGCCATCTTCCTTTTGGTCCAACTGCATATTTTGGATTGTTGAATGTGGTTACCCGACATGAAATTAAGGACAAAAAA
GCTATGGGAACGATGCCTGAGGCATATCCGCACATAATTTTGAACAATTTTACAACGAAGTTGGGTGAAAGGACGGCCAACATCTTAAAGCATCTATTTCCTGTGCCGAA
GCCAGATACCAAACGTGTGGTTACTTTTGCTAATCAATCTGACTATGTTTCATTCAGGCATCATATTTATGAGAAGCATGGAGGTGCTAAATCAATTGAGCTGAAGGAGA
TCGGTCCTCGGTTTGAATTGCGACTGTATCAGATAAAGTTGGGAACTGTTGATCAAACGGAAGCTCAAAATGAATGGGTGATTAGACCATATATGAAAACAACCAAGAAA
CGCAAGTTCCTTGGTGATTGAGAAACAGCTGAAGGAGGGAGCAGATTGTATTCTGTGTTTTATTTTTTATTTATTTATTTTTAGCATAATCACATTTTTATTAAAAAATA
TATTTTGTTCGGTTGGGGATACCAAAATTTCTTTAGAACAAGAACTTGAAATTGTTTGCAAATTCCATCAAAGTGTACGGAATTCTGATTATATATAAAAAAAATGAGTC
GACTTCTTG

Protein sequence

Show/hide protein sequence

MLRRNIRLRREYLYRKSLEGKDRLLYEKKRKIREALEEGKPIPTELRNEEATLRKEIELEDDHTSVPRTLIDDEYANASEIDPKILITTSRDPSAPLTQFAKELKIVFPN
AQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGERTANILKHLFPVPKPDTKRV
VTFANQSDYVSFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD

Tan0002764 (gene) of Snake gourd v1 genome