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Tan0002774 (gene) of Snake gourd v1 genome

Gene IDTan0002774
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionGag/pol protein
Genome locationLG03:35691752..35692018
RNA-Seq ExpressionTan0002774
SyntenyTan0002774
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008234 - cysteine-type peptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044955.1 gag/pol protein [Cucumis melo var. makuwa]2.2e-2572.62Show/hide
Query:  MITAKEIMGSLQAMFGQPSSSVRYDALKYVYNSRMKEGTSVREHVLNMMVRFNVAEVNGVVIDEKSQVSFIMESLPKSFLQIHT
        M+TA+EIM SLQ MFGQ S  +++DALKY+YN+RM EG SVREHVLNMMV FNVAE+NG VIDE SQVSFI+ESLP+SFLQ  +
Subjt:  MITAKEIMGSLQAMFGQPSSSVRYDALKYVYNSRMKEGTSVREHVLNMMVRFNVAEVNGVVIDEKSQVSFIMESLPKSFLQIHT

KAA0048404.1 gag/pol protein [Cucumis melo var. makuwa]2.2e-2572.62Show/hide
Query:  MITAKEIMGSLQAMFGQPSSSVRYDALKYVYNSRMKEGTSVREHVLNMMVRFNVAEVNGVVIDEKSQVSFIMESLPKSFLQIHT
        M+TA+EIM SLQ MFGQ S  +++DALKY+YN+RM EG SVREHVLNMMV FNVAE+NG VIDE SQVSFI+ESLP+SFLQ  +
Subjt:  MITAKEIMGSLQAMFGQPSSSVRYDALKYVYNSRMKEGTSVREHVLNMMVRFNVAEVNGVVIDEKSQVSFIMESLPKSFLQIHT

KAA0054490.1 gag/pol protein [Cucumis melo var. makuwa]2.2e-2572.62Show/hide
Query:  MITAKEIMGSLQAMFGQPSSSVRYDALKYVYNSRMKEGTSVREHVLNMMVRFNVAEVNGVVIDEKSQVSFIMESLPKSFLQIHT
        M+TA+EIM SLQ MFGQ S  +++DALKY+YN+RM EG SVREHVLNMMV FNVAE+NG VIDE SQVSFI+ESLP+SFLQ  +
Subjt:  MITAKEIMGSLQAMFGQPSSSVRYDALKYVYNSRMKEGTSVREHVLNMMVRFNVAEVNGVVIDEKSQVSFIMESLPKSFLQIHT

TYK14550.1 gag/pol protein [Cucumis melo var. makuwa]2.2e-2572.62Show/hide
Query:  MITAKEIMGSLQAMFGQPSSSVRYDALKYVYNSRMKEGTSVREHVLNMMVRFNVAEVNGVVIDEKSQVSFIMESLPKSFLQIHT
        M+TA+EIM SLQ MFGQ S  +++DALKY+YN+RM EG SVREHVLNMMV FNVAE+NG VIDE SQVSFI+ESLP+SFLQ  +
Subjt:  MITAKEIMGSLQAMFGQPSSSVRYDALKYVYNSRMKEGTSVREHVLNMMVRFNVAEVNGVVIDEKSQVSFIMESLPKSFLQIHT

XP_022158197.1 uncharacterized protein LOC111024734 [Momordica charantia]5.7e-2673.49Show/hide
Query:  ITAKEIMGSLQAMFGQPSSSVRYDALKYVYNSRMKEGTSVREHVLNMMVRFNVAEVNGVVIDEKSQVSFIMESLPKSFLQIHT
        +T KEIM SLQ+MFGQPS   R++ALK+VYNSRMKEG+SVREHVLN+MV FNVAE NG+VIDE+SQ SFI+ESLPK+FL  H+
Subjt:  ITAKEIMGSLQAMFGQPSSSVRYDALKYVYNSRMKEGTSVREHVLNMMVRFNVAEVNGVVIDEKSQVSFIMESLPKSFLQIHT

TrEMBL top hitse value%identityAlignment
A0A5A7SMH8 Gag/pol protein1.1e-2572.62Show/hide
Query:  MITAKEIMGSLQAMFGQPSSSVRYDALKYVYNSRMKEGTSVREHVLNMMVRFNVAEVNGVVIDEKSQVSFIMESLPKSFLQIHT
        M+TA+EIM SLQ MFGQ S  +++DALKY+YN+RM EG SVREHVLNMMV FNVAE+NG VIDE SQVSFI+ESLP+SFLQ  +
Subjt:  MITAKEIMGSLQAMFGQPSSSVRYDALKYVYNSRMKEGTSVREHVLNMMVRFNVAEVNGVVIDEKSQVSFIMESLPKSFLQIHT

A0A5A7TU93 Gag/pol protein1.1e-2572.62Show/hide
Query:  MITAKEIMGSLQAMFGQPSSSVRYDALKYVYNSRMKEGTSVREHVLNMMVRFNVAEVNGVVIDEKSQVSFIMESLPKSFLQIHT
        M+TA+EIM SLQ MFGQ S  +++DALKY+YN+RM EG SVREHVLNMMV FNVAE+NG VIDE SQVSFI+ESLP+SFLQ  +
Subjt:  MITAKEIMGSLQAMFGQPSSSVRYDALKYVYNSRMKEGTSVREHVLNMMVRFNVAEVNGVVIDEKSQVSFIMESLPKSFLQIHT

A0A5A7V4M1 Gag/pol protein1.1e-2572.62Show/hide
Query:  MITAKEIMGSLQAMFGQPSSSVRYDALKYVYNSRMKEGTSVREHVLNMMVRFNVAEVNGVVIDEKSQVSFIMESLPKSFLQIHT
        M+TA+EIM SLQ MFGQ S  +++DALKY+YN+RM EG SVREHVLNMMV FNVAE+NG VIDE SQVSFI+ESLP+SFLQ  +
Subjt:  MITAKEIMGSLQAMFGQPSSSVRYDALKYVYNSRMKEGTSVREHVLNMMVRFNVAEVNGVVIDEKSQVSFIMESLPKSFLQIHT

A0A5D3CPJ6 Gag/pol protein1.1e-2572.62Show/hide
Query:  MITAKEIMGSLQAMFGQPSSSVRYDALKYVYNSRMKEGTSVREHVLNMMVRFNVAEVNGVVIDEKSQVSFIMESLPKSFLQIHT
        M+TA+EIM SLQ MFGQ S  +++DALKY+YN+RM EG SVREHVLNMMV FNVAE+NG VIDE SQVSFI+ESLP+SFLQ  +
Subjt:  MITAKEIMGSLQAMFGQPSSSVRYDALKYVYNSRMKEGTSVREHVLNMMVRFNVAEVNGVVIDEKSQVSFIMESLPKSFLQIHT

A0A6J1DWL0 uncharacterized protein LOC1110247342.8e-2673.49Show/hide
Query:  ITAKEIMGSLQAMFGQPSSSVRYDALKYVYNSRMKEGTSVREHVLNMMVRFNVAEVNGVVIDEKSQVSFIMESLPKSFLQIHT
        +T KEIM SLQ+MFGQPS   R++ALK+VYNSRMKEG+SVREHVLN+MV FNVAE NG+VIDE+SQ SFI+ESLPK+FL  H+
Subjt:  ITAKEIMGSLQAMFGQPSSSVRYDALKYVYNSRMKEGTSVREHVLNMMVRFNVAEVNGVVIDEKSQVSFIMESLPKSFLQIHT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCACCGCAAAGGAGATCATGGGATCATTACAGGCCATGTTTGGACAACCGTCCTCATCGGTCCGTTATGATGCTCTCAAGTACGTTTACAACTCCCGAATGAAGGA
GGGAACATCTGTTAGGGAGCATGTCCTTAATATGATGGTCCGTTTCAACGTGGCCGAGGTAAACGGGGTTGTCATTGATGAGAAGAGTCAGGTTAGCTTTATAATGGAAT
CTCTTCCGAAGAGTTTCCTGCAGATTCACACACCAATTCGAGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGATCACCGCAAAGGAGATCATGGGATCATTACAGGCCATGTTTGGACAACCGTCCTCATCGGTCCGTTATGATGCTCTCAAGTACGTTTACAACTCCCGAATGAAGGA
GGGAACATCTGTTAGGGAGCATGTCCTTAATATGATGGTCCGTTTCAACGTGGCCGAGGTAAACGGGGTTGTCATTGATGAGAAGAGTCAGGTTAGCTTTATAATGGAAT
CTCTTCCGAAGAGTTTCCTGCAGATTCACACACCAATTCGAGAATGA
Protein sequenceShow/hide protein sequence
MITAKEIMGSLQAMFGQPSSSVRYDALKYVYNSRMKEGTSVREHVLNMMVRFNVAEVNGVVIDEKSQVSFIMESLPKSFLQIHTPIRE