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Tan0002789 (gene) of Snake gourd v1 genome

Gene IDTan0002789
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionRING-type E3 ubiquitin transferase
Genome locationLG01:30892121..30892588
RNA-Seq ExpressionTan0002789
SyntenyTan0002789
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR044675 - E3 ubiquitin-protein ligase RING1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8653247.1 hypothetical protein Csa_019633 [Cucumis sativus]2.8e-4460Show/hide
Query:  PPPSPPPADYLVSVLSAVDFDFLKFTGLSVL----VYFIFTCCGRKYWNQRQDMEGGG-QRQTVAPLPAVCSD-------GNEGAASTRLFQYGSERGME
        PPP PPP +  V VLS +D DFL F GLS L    +YF+FTCC RKYWN+  D+EGG     T+   PA  ++        +    STRLFQYG   G+ 
Subjt:  PPPSPPPADYLVSVLSAVDFDFLKFTGLSVL----VYFIFTCCGRKYWNQRQDMEGGG-QRQTVAPLPAVCSD-------GNEGAASTRLFQYGSERGME

Query:  GKNEDCSICLDEFTEGEICRMLLKCKHVFHRFCIDKWLPNRRHCPLCRSPVHVRI
        GKN DCSICLDEFTEGEICRML KCKHVFHRFCID+WLPN R+CP+CRSPV+VR+
Subjt:  GKNEDCSICLDEFTEGEICRMLLKCKHVFHRFCIDKWLPNRRHCPLCRSPVHVRI

XP_004151031.2 RING-H2 finger protein ATL39 [Cucumis sativus]2.8e-4460Show/hide
Query:  PPPSPPPADYLVSVLSAVDFDFLKFTGLSVL----VYFIFTCCGRKYWNQRQDMEGGG-QRQTVAPLPAVCSD-------GNEGAASTRLFQYGSERGME
        PPP PPP +  V VLS +D DFL F GLS L    +YF+FTCC RKYWN+  D+EGG     T+   PA  ++        +    STRLFQYG   G+ 
Subjt:  PPPSPPPADYLVSVLSAVDFDFLKFTGLSVL----VYFIFTCCGRKYWNQRQDMEGGG-QRQTVAPLPAVCSD-------GNEGAASTRLFQYGSERGME

Query:  GKNEDCSICLDEFTEGEICRMLLKCKHVFHRFCIDKWLPNRRHCPLCRSPVHVRI
        GKN DCSICLDEFTEGEICRML KCKHVFHRFCID+WLPN R+CP+CRSPV+VR+
Subjt:  GKNEDCSICLDEFTEGEICRMLLKCKHVFHRFCIDKWLPNRRHCPLCRSPVHVRI

XP_022970579.1 RING-H2 finger protein ATL14-like [Cucurbita maxima]1.8e-4363.95Show/hide
Query:  PPPADYLVSVLSAVDFDFLKFTGLSVL----VYFIFTCCGRKYWNQRQDMEGGGQRQTVAPLPAVCSDGNE-----GAASTRLFQYGSERGMEGKNEDCS
        PPP +  V VLS VD DFL F GL +L    +YFI+T    KYWN+ +D+EGG    T     +V S G +        STRLFQYG ERGMEGKN DCS
Subjt:  PPPADYLVSVLSAVDFDFLKFTGLSVL----VYFIFTCCGRKYWNQRQDMEGGGQRQTVAPLPAVCSDGNE-----GAASTRLFQYGSERGMEGKNEDCS

Query:  ICLDEFTEGEICRMLLKCKHVFHRFCIDKWLPNRRHCPLCRSPVHVR
        ICLDEF EGEICRML KCKHVFHRFCID+WLPN RHCPLCRSPVHVR
Subjt:  ICLDEFTEGEICRMLLKCKHVFHRFCIDKWLPNRRHCPLCRSPVHVR

XP_023520573.1 RING-H2 finger protein ATL51-like [Cucurbita pepo subsp. pepo]2.0e-4263.58Show/hide
Query:  PPPSPPPADYLVSVLSAVDFDFLKFTGLSVL----VYFIFTCCGRKYWNQRQDMEGGGQRQTVAPLPAVCSDGNE-----GAASTRLFQYGSERGMEGKN
        PPPSP   +  V VLS VD DFL F GL +L    +YFI+T    KYWN+ +D+EGG    T     AV S G +        STRLFQYG ERGM GKN
Subjt:  PPPSPPPADYLVSVLSAVDFDFLKFTGLSVL----VYFIFTCCGRKYWNQRQDMEGGGQRQTVAPLPAVCSDGNE-----GAASTRLFQYGSERGMEGKN

Query:  EDCSICLDEFTEGEICRMLLKCKHVFHRFCIDKWLPNRRHCPLCRSPVHVR
         DCSICLDEF EGEICRML KCKHVFHRFCID+WLPN RHCPLCRSPVHVR
Subjt:  EDCSICLDEFTEGEICRMLLKCKHVFHRFCIDKWLPNRRHCPLCRSPVHVR

XP_038895799.1 E3 ubiquitin-protein ligase RING1-like [Benincasa hispida]5.7e-4563.46Show/hide
Query:  PPPSPPPADYLVSVLSAVDFDFLKFTGLSVL----VYFIFTCCGRKYWNQRQDMEGG--GQRQTVA-PLPAVCSDGNE------GAASTRLFQYGSERGM
        PPP P PA+  V VLS +D DFL F GLS L    VYFIFTC  RKYWN+  D+EGG      TVA PL +   D +          ST+LFQYG E G+
Subjt:  PPPSPPPADYLVSVLSAVDFDFLKFTGLSVL----VYFIFTCCGRKYWNQRQDMEGG--GQRQTVA-PLPAVCSDGNE------GAASTRLFQYGSERGM

Query:  EGKNEDCSICLDEFTEGEICRMLLKCKHVFHRFCIDKWLPNRRHCPLCRSPVHVRI
         GKN DCSICLDEF+EGEICRML KCKHVFHRFCID+WLPN RHCP+CRSPVHVRI
Subjt:  EGKNEDCSICLDEFTEGEICRMLLKCKHVFHRFCIDKWLPNRRHCPLCRSPVHVRI

TrEMBL top hitse value%identityAlignment
A0A0A0M0H1 RING-type E3 ubiquitin transferase1.4e-4460Show/hide
Query:  PPPSPPPADYLVSVLSAVDFDFLKFTGLSVL----VYFIFTCCGRKYWNQRQDMEGGG-QRQTVAPLPAVCSD-------GNEGAASTRLFQYGSERGME
        PPP PPP +  V VLS +D DFL F GLS L    +YF+FTCC RKYWN+  D+EGG     T+   PA  ++        +    STRLFQYG   G+ 
Subjt:  PPPSPPPADYLVSVLSAVDFDFLKFTGLSVL----VYFIFTCCGRKYWNQRQDMEGGG-QRQTVAPLPAVCSD-------GNEGAASTRLFQYGSERGME

Query:  GKNEDCSICLDEFTEGEICRMLLKCKHVFHRFCIDKWLPNRRHCPLCRSPVHVRI
        GKN DCSICLDEFTEGEICRML KCKHVFHRFCID+WLPN R+CP+CRSPV+VR+
Subjt:  GKNEDCSICLDEFTEGEICRMLLKCKHVFHRFCIDKWLPNRRHCPLCRSPVHVRI

A0A5A7VKM2 RING-H2 finger protein ATL39-like8.3e-4258.71Show/hide
Query:  PPPSPPPADYLVSVLSAVDFDFLKFTGLSVL----VYFIFTCCGRKYWNQRQDMEGGG-QRQTVAPLPAVCS-------DGNEGAASTRLFQYGSERGME
        P P PPP D  V  LSA+D DFL   GLS L    +YFIFTC  RK+WN+  D+EGG    +T+   PA  +         +    STRLFQYG   G+ 
Subjt:  PPPSPPPADYLVSVLSAVDFDFLKFTGLSVL----VYFIFTCCGRKYWNQRQDMEGGG-QRQTVAPLPAVCS-------DGNEGAASTRLFQYGSERGME

Query:  GKNEDCSICLDEFTEGEICRMLLKCKHVFHRFCIDKWLPNRRHCPLCRSPVHVRI
        GKN DCSICLDEFTEGEICRML KCKHVFHRFCID+WLPN R+CP+CRSPV+VR+
Subjt:  GKNEDCSICLDEFTEGEICRMLLKCKHVFHRFCIDKWLPNRRHCPLCRSPVHVRI

A0A5D3BEF0 RING-H2 finger protein ATL39-like8.3e-4256.79Show/hide
Query:  PPPSPPPADYLVSVLSAVDFDFLKFTGLSVL----VYFIFTCCGRKYWNQRQDMEGGGQRQTVAPLPAVCSD---------------GNEGAASTRLFQY
        P P PPP D  V  LSA+D DFL   GLS L    +YFIFTC  RK+WN+  D+EGG        LP+V  D                +    STRLFQY
Subjt:  PPPSPPPADYLVSVLSAVDFDFLKFTGLSVL----VYFIFTCCGRKYWNQRQDMEGGGQRQTVAPLPAVCSD---------------GNEGAASTRLFQY

Query:  GSERGMEGKNEDCSICLDEFTEGEICRMLLKCKHVFHRFCIDKWLPNRRHCPLCRSPVHVRI
        G   G+ GKN DCSICLDEFTEGEICRML KCKHVFHRFCID+WLPN R+CP+CRSPV+VR+
Subjt:  GSERGMEGKNEDCSICLDEFTEGEICRMLLKCKHVFHRFCIDKWLPNRRHCPLCRSPVHVRI

A0A6J1HLQ2 RING-type E3 ubiquitin transferase8.3e-4262.91Show/hide
Query:  PPPSPPPADYLVSVLSAVDFDFLKFTGLSVL----VYFIFTCCGRKYWNQRQDMEGGGQRQTVAPLPAVCSDGNE-----GAASTRLFQYGSERGMEGKN
        PPPSP   +  V VLS VD DFL F GL +L    +YFI+T    KYWN+ +D+EGG          AV S G +        STRLFQYG ERGM GKN
Subjt:  PPPSPPPADYLVSVLSAVDFDFLKFTGLSVL----VYFIFTCCGRKYWNQRQDMEGGGQRQTVAPLPAVCSDGNE-----GAASTRLFQYGSERGMEGKN

Query:  EDCSICLDEFTEGEICRMLLKCKHVFHRFCIDKWLPNRRHCPLCRSPVHVR
         DCSICLDEF EGEICRML KCKHVFHRFCID+WLPN RHCPLCRSPVHVR
Subjt:  EDCSICLDEFTEGEICRMLLKCKHVFHRFCIDKWLPNRRHCPLCRSPVHVR

A0A6J1I603 RING-type E3 ubiquitin transferase8.9e-4463.95Show/hide
Query:  PPPADYLVSVLSAVDFDFLKFTGLSVL----VYFIFTCCGRKYWNQRQDMEGGGQRQTVAPLPAVCSDGNE-----GAASTRLFQYGSERGMEGKNEDCS
        PPP +  V VLS VD DFL F GL +L    +YFI+T    KYWN+ +D+EGG    T     +V S G +        STRLFQYG ERGMEGKN DCS
Subjt:  PPPADYLVSVLSAVDFDFLKFTGLSVL----VYFIFTCCGRKYWNQRQDMEGGGQRQTVAPLPAVCSDGNE-----GAASTRLFQYGSERGMEGKNEDCS

Query:  ICLDEFTEGEICRMLLKCKHVFHRFCIDKWLPNRRHCPLCRSPVHVR
        ICLDEF EGEICRML KCKHVFHRFCID+WLPN RHCPLCRSPVHVR
Subjt:  ICLDEFTEGEICRMLLKCKHVFHRFCIDKWLPNRRHCPLCRSPVHVR

SwissProt top hitse value%identityAlignment
P0C034 RING-H2 finger protein ATL101.1e-1136.44Show/hide
Query:  LSVLVYFIFTCCGRKYWNQRQDMEGGGQRQTVAPLPAVCS---DGNEG--AASTRLF---QYGSERGMEGKNEDCSICLDEFTEGEICRMLLKCKHVFHR
        LS+L+  I  C G  Y   R  +    +     P+P++ S     N+G    + R+F    Y  E  + G +E+C ICL +F  GE  R+L KC H FH 
Subjt:  LSVLVYFIFTCCGRKYWNQRQDMEGGGQRQTVAPLPAVCS---DGNEG--AASTRLF---QYGSERGMEGKNEDCSICLDEFTEGEICRMLLKCKHVFHR

Query:  FCIDKWLPNRRHCPLCRS
         CIDKWL     CP CR+
Subjt:  FCIDKWLPNRRHCPLCRS

P0C041 Putative RING-H2 finger protein ATL531.5e-1150Show/hide
Query:  ERGMEGKNEDCSICLDEFTEGEICRMLLKCKHVFHRFCIDKWLPNRRHCPLCRSPVHV
        + G +    DCSICL EF E E  R+L KC H FH  CID+WL +  +CPLCR+ + V
Subjt:  ERGMEGKNEDCSICLDEFTEGEICRMLLKCKHVFHRFCIDKWLPNRRHCPLCRSPVHV

Q5XF85 E3 ubiquitin-protein ligase ATL423.3e-1141.33Show/hide
Query:  STRLFQYGSERGMEGKNEDCSICLDEFTEGEICRMLLKCKHVFHRFCIDKWLPNRRHCPLCRSPVHVRISPSMIS
        S  LF++ + +G + +  DCS+CL +F   EI R+L KC+H FH  CID+WL     CPLCR  V +    S+++
Subjt:  STRLFQYGSERGMEGKNEDCSICLDEFTEGEICRMLLKCKHVFHRFCIDKWLPNRRHCPLCRSPVHVRISPSMIS

Q94BY6 RING-H2 finger protein ATL753.0e-1237.93Show/hide
Query:  LSVLVYFIFTCCGRKYWNQRQDMEGGG--QRQTVAPLPAVCSDGNEG--AASTRLF---QYGSERGMEGKNEDCSICLDEFTEGEICRMLLKCKHVFHRF
        LSVL+  I  C G  Y  +            + +A L   C   N+G    + R+F    Y  E  + G  E+C ICL +F  GE  RML KC H FH  
Subjt:  LSVLVYFIFTCCGRKYWNQRQDMEGGG--QRQTVAPLPAVCSDGNEG--AASTRLF---QYGSERGMEGKNEDCSICLDEFTEGEICRMLLKCKHVFHRF

Query:  CIDKWLPNRRHCPLCR
        CIDKWL     CP CR
Subjt:  CIDKWLPNRRHCPLCR

Q9LX93 E3 ubiquitin-protein ligase RING13.0e-1232.73Show/hide
Query:  PPPPSPPPADYLVSVLSAVDFDFLKFTGLSV-LVYFIFTCCGRKY-----------WNQRQDMEGGGQR-----QTVAPLPAVCSDGNEGAASTRLFQYG
        PPPP PPP    +S+L       +    L + LV+F++    ++             NQ++D +   +R       V  +P V   G   +A   +   G
Subjt:  PPPPSPPPADYLVSVLSAVDFDFLKFTGLSV-LVYFIFTCCGRKY-----------WNQRQDMEGGGQR-----QTVAPLPAVCSDGNEGAASTRLFQYG

Query:  SERGMEG--KNEDCSICLDEFTEGEICRMLLKCKHVFHRFCIDKWLPNRRHCPLCRSPVHVRISP
         ++G EG     +CS+CL+EF E E  R+L KC H FH  CID WL + ++CPLCR+PV +   P
Subjt:  SERGMEG--KNEDCSICLDEFTEGEICRMLLKCKHVFHRFCIDKWLPNRRHCPLCRSPVHVRISP

Arabidopsis top hitse value%identityAlignment
AT1G49200.1 RING/U-box superfamily protein2.1e-1337.93Show/hide
Query:  LSVLVYFIFTCCGRKYWNQRQDMEGGG--QRQTVAPLPAVCSDGNEG--AASTRLF---QYGSERGMEGKNEDCSICLDEFTEGEICRMLLKCKHVFHRF
        LSVL+  I  C G  Y  +            + +A L   C   N+G    + R+F    Y  E  + G  E+C ICL +F  GE  RML KC H FH  
Subjt:  LSVLVYFIFTCCGRKYWNQRQDMEGGG--QRQTVAPLPAVCSDGNEG--AASTRLF---QYGSERGMEGKNEDCSICLDEFTEGEICRMLLKCKHVFHRF

Query:  CIDKWLPNRRHCPLCR
        CIDKWL     CP CR
Subjt:  CIDKWLPNRRHCPLCR

AT1G49220.1 RING/U-box superfamily protein8.0e-1336.44Show/hide
Query:  LSVLVYFIFTCCGRKYWNQRQDMEGGGQRQTVAPLPAVCS---DGNEG--AASTRLF---QYGSERGMEGKNEDCSICLDEFTEGEICRMLLKCKHVFHR
        LS+L+  I  C G  Y   R  +    +     P+P++ S     N+G    + R+F    Y  E  + G +E+C ICL +F  GE  R+L KC H FH 
Subjt:  LSVLVYFIFTCCGRKYWNQRQDMEGGGQRQTVAPLPAVCS---DGNEG--AASTRLF---QYGSERGMEGKNEDCSICLDEFTEGEICRMLLKCKHVFHR

Query:  FCIDKWLPNRRHCPLCRS
         CIDKWL     CP CR+
Subjt:  FCIDKWLPNRRHCPLCRS

AT4G17905.1 RING/U-box superfamily protein1.0e-1250Show/hide
Query:  ERGMEGKNEDCSICLDEFTEGEICRMLLKCKHVFHRFCIDKWLPNRRHCPLCRSPVHV
        + G +    DCSICL EF E E  R+L KC H FH  CID+WL +  +CPLCR+ + V
Subjt:  ERGMEGKNEDCSICLDEFTEGEICRMLLKCKHVFHRFCIDKWLPNRRHCPLCRSPVHV

AT4G33565.1 RING/U-box superfamily protein8.6e-1548.48Show/hide
Query:  ASTRLFQYGSERGMEGKNEDCSICLDEFTEGEICRMLLKCKHVFHRFCIDKWLPNRRHCPLCRSPV
        +S ++ QY  + G+  +  DCS+CL EF E E  R+L KCKH FH +CID WL +  +CPLCR+P+
Subjt:  ASTRLFQYGSERGMEGKNEDCSICLDEFTEGEICRMLLKCKHVFHRFCIDKWLPNRRHCPLCRSPV

AT5G10380.1 RING/U-box superfamily protein2.1e-1332.73Show/hide
Query:  PPPPSPPPADYLVSVLSAVDFDFLKFTGLSV-LVYFIFTCCGRKY-----------WNQRQDMEGGGQR-----QTVAPLPAVCSDGNEGAASTRLFQYG
        PPPP PPP    +S+L       +    L + LV+F++    ++             NQ++D +   +R       V  +P V   G   +A   +   G
Subjt:  PPPPSPPPADYLVSVLSAVDFDFLKFTGLSV-LVYFIFTCCGRKY-----------WNQRQDMEGGGQR-----QTVAPLPAVCSDGNEGAASTRLFQYG

Query:  SERGMEG--KNEDCSICLDEFTEGEICRMLLKCKHVFHRFCIDKWLPNRRHCPLCRSPVHVRISP
         ++G EG     +CS+CL+EF E E  R+L KC H FH  CID WL + ++CPLCR+PV +   P
Subjt:  SERGMEG--KNEDCSICLDEFTEGEICRMLLKCKHVFHRFCIDKWLPNRRHCPLCRSPVHVRISP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCCGCCGCCGCCGTCGCCGCCGCCGGCAGATTACTTGGTGAGCGTTCTATCCGCGGTGGATTTCGACTTTCTAAAATTCACAGGACTGTCCGTTCTGGTGTACTT
CATCTTCACCTGTTGCGGACGCAAATACTGGAACCAAAGGCAAGATATGGAAGGCGGAGGGCAGCGACAGACGGTGGCTCCACTTCCGGCGGTTTGTTCGGACGGCAATG
AAGGAGCGGCGTCGACGAGGCTGTTCCAATACGGATCAGAGCGAGGAATGGAAGGGAAAAATGAGGATTGTTCGATTTGTTTGGATGAATTCACAGAAGGTGAGATTTGT
CGAATGCTACTAAAATGCAAACATGTTTTTCATCGATTTTGCATCGATAAATGGCTTCCTAATCGACGTCACTGTCCTCTTTGTCGTTCTCCTGTTCATGTTCGTATATC
CCCATCCATGATCTCGAGACTTTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCCGCCGCCGCCGTCGCCGCCGCCGGCAGATTACTTGGTGAGCGTTCTATCCGCGGTGGATTTCGACTTTCTAAAATTCACAGGACTGTCCGTTCTGGTGTACTT
CATCTTCACCTGTTGCGGACGCAAATACTGGAACCAAAGGCAAGATATGGAAGGCGGAGGGCAGCGACAGACGGTGGCTCCACTTCCGGCGGTTTGTTCGGACGGCAATG
AAGGAGCGGCGTCGACGAGGCTGTTCCAATACGGATCAGAGCGAGGAATGGAAGGGAAAAATGAGGATTGTTCGATTTGTTTGGATGAATTCACAGAAGGTGAGATTTGT
CGAATGCTACTAAAATGCAAACATGTTTTTCATCGATTTTGCATCGATAAATGGCTTCCTAATCGACGTCACTGTCCTCTTTGTCGTTCTCCTGTTCATGTTCGTATATC
CCCATCCATGATCTCGAGACTTTTTTGA
Protein sequenceShow/hide protein sequence
MAPPPPSPPPADYLVSVLSAVDFDFLKFTGLSVLVYFIFTCCGRKYWNQRQDMEGGGQRQTVAPLPAVCSDGNEGAASTRLFQYGSERGMEGKNEDCSICLDEFTEGEIC
RMLLKCKHVFHRFCIDKWLPNRRHCPLCRSPVHVRISPSMISRLF