; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0002813 (gene) of Snake gourd v1 genome

Gene IDTan0002813
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionRibonuclease H-like superfamily protein
Genome locationLG01:41035084..41035814
RNA-Seq ExpressionTan0002813
SyntenyTan0002813
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022145148.1 uncharacterized protein LOC111014662 [Momordica charantia]3.7e-3952.41Show/hide
Query:  SGKCCRLPNKSCDDINRLCAQFCWGYSGNKKRAHWMSWKKLCQSKHVGGFGFRDFKLFNQATLSKISWRLTCFPNSLLANILRGRYYKNRDFLQAPIGSN
        S  C R P   C +IN L A+F WG +  +K+ HW SWK+LC SK  GG GF+D  +FNQA L+K SW++   PNSLL  +LRG+Y+K+ +F+ A +GSN
Subjt:  SGKCCRLPNKSCDDINRLCAQFCWGYSGNKKRAHWMSWKKLCQSKHVGGFGFRDFKLFNQATLSKISWRLTCFPNSLLANILRGRYYKNRDFLQAPIGSN

Query:  SSLTRRSIIWGKELFLKDYRWKVENGSQVYITKDPWIARQGSHLP
         S   RSI+WGKELF+K  RW++ NG  V I  DPWI R+GS LP
Subjt:  SSLTRRSIIWGKELFLKDYRWKVENGSQVYITKDPWIARQGSHLP

XP_022155286.1 uncharacterized protein LOC111022423 [Momordica charantia]1.6e-4242Show/hide
Query:  IKTISLQRSKTESGKCCRLPNKSCDDINRLCAQFCWGYSGNKKRAHWMSWKKLCQSKHVGGFGFRDFKLFNQATLSKISWRLTCFPNSLLANILRGRYYK
        IKT++ Q     +  C +LP   C++++++  +F WG S   ++ HW SWK LC  K +GG GFRD  +FNQA L+K SWR+   P+SLLA  LRG+Y+K
Subjt:  IKTISLQRSKTESGKCCRLPNKSCDDINRLCAQFCWGYSGNKKRAHWMSWKKLCQSKHVGGFGFRDFKLFNQATLSKISWRLTCFPNSLLANILRGRYYK

Query:  NRDFLQAPIGSNSSLTRRSIIWGKELFLKDYRWKVENGSQVYITKDPWIARQGSHLPLWTSEDLEDKRVSFFLHEDLKWNEPLIRSILIPSDAEDILNTP
           FLQA +G+  S   RSI+WG++LF K YRWKV NG  + ++ DPW+ R G+  P++T   + +  V++ +    +W+E  +R   I S+A+ IL TP
Subjt:  NRDFLQAPIGSNSSLTRRSIIWGKELFLKDYRWKVENGSQVYITKDPWIARQGSHLPLWTSEDLEDKRVSFFLHEDLKWNEPLIRSILIPSDAEDILNTP

XP_024038343.1 uncharacterized protein LOC112097373 [Citrus clementina]4.1e-3842.22Show/hide
Query:  RLPNKSCDDINRLCAQFCWGYSGNKKRAHWMSWKKLCQSKHVGGFGFRDFKLFNQATLSKISWRLTCFPNSLLANILRGRYYKNRDFLQAPIGSNSSLTR
        ++P   CDDI R+ A F WGY  +KK  HW  W KL Q+K  GG GFRDF  FNQA ++K  WR+  FP+SL+A IL+ RY++++DF+ A +GSN S   
Subjt:  RLPNKSCDDINRLCAQFCWGYSGNKKRAHWMSWKKLCQSKHVGGFGFRDFKLFNQATLSKISWRLTCFPNSLLANILRGRYYKNRDFLQAPIGSNSSLTR

Query:  RSIIWGKELFLKDYRWKVENGSQVYITKDPWIARQGSHLPLWTSEDLEDKRVSFFLHEDLKWNEPLIRSILIPSDAEDIL
        RSI+WG+++  K  +W++ NG  + + K+ W+ R  +  P+       D  V+  ++ED  WNE LI       DAE I+
Subjt:  RSIIWGKELFLKDYRWKVENGSQVYITKDPWIARQGSHLPLWTSEDLEDKRVSFFLHEDLKWNEPLIRSILIPSDAEDIL

XP_030509050.1 uncharacterized protein LOC115723712 [Cannabis sativa]2.0e-3740Show/hide
Query:  LQRSKTESGKCCRLPNKSCDDINRLCAQFCWGYSGNKKRAHWMSWKKLCQSKHVGGFGFRDFKLFNQATLSKISWRLTCFPNSLLANILRGRYYKNRDFL
        +Q   T +  C +LP K C+ I +L ++F WG S N    HW +WK LC+SK  GG GFR+F  FNQA L+K +WR+   P+SL+A +L+ RY+    FL
Subjt:  LQRSKTESGKCCRLPNKSCDDINRLCAQFCWGYSGNKKRAHWMSWKKLCQSKHVGGFGFRDFKLFNQATLSKISWRLTCFPNSLLANILRGRYYKNRDFL

Query:  QAPIGSNSSLTRRSIIWGKELFLKDYRWKVENGSQVYITKDPWIARQGSHLPLWTSEDLEDKRVSFFLHEDLKWNEPLIRSILIPSDAEDILNTP
        +A  G+  SLT +SI+WGKEL LK  RW++ +G+ V     PWI    +  PL       D +V+ F+    +W+ P ++    P D + IL+ P
Subjt:  QAPIGSNSSLTRRSIIWGKELFLKDYRWKVENGSQVYITKDPWIARQGSHLPLWTSEDLEDKRVSFFLHEDLKWNEPLIRSILIPSDAEDILNTP

XP_030509336.1 uncharacterized protein LOC115724021 [Cannabis sativa]4.6e-3741.62Show/hide
Query:  CCRLPNKSCDDINRLCAQFCWGYSGNKKRAHWMSWKKLCQSKHVGGFGFRDFKLFNQATLSKISWRLTCFPNSLLANILRGRYYKNRDFLQAPIGSNSSL
        C +LP+     + ++ A F WG   +KK+ HW  WK LC++K  GG GFR F  FNQA L+K +WR+  FP+SLL+ +L+GRY+ + DFLQAP    SSL
Subjt:  CCRLPNKSCDDINRLCAQFCWGYSGNKKRAHWMSWKKLCQSKHVGGFGFRDFKLFNQATLSKISWRLTCFPNSLLANILRGRYYKNRDFLQAPIGSNSSL

Query:  TRRSIIWGKELFLKDYRWKVENGSQVYITKDPWIARQGSHLPLWTSEDLEDKRVSFFLHEDLKWNEPLIRSILIPSDAEDILNTP
        T + I WG++L +K  R K+ +GS V    DPWI R     P+    D ++  VS+++ +D +WN PL+       D + IL+ P
Subjt:  TRRSIIWGKELFLKDYRWKVENGSQVYITKDPWIARQGSHLPLWTSEDLEDKRVSFFLHEDLKWNEPLIRSILIPSDAEDILNTP

TrEMBL top hitse value%identityAlignment
A0A1S8ACU2 Ribonuclease H-like superfamily protein2.2e-3744.07Show/hide
Query:  RLPNKSCDDINRLCAQFCWGYSGNKKRAHWMSWKKLCQSKHVGGFGFRDFKLFNQATLSKISWRLTCFPNSLLANILRGRYYKNRDFLQAPIGSNSSLTR
        RLP   C+DI R+ A F WG   ++K  HW SW+KLCQ+K  GG GFRD   FNQA ++K SWR+  +P SL+A IL+ +Y+K  DFLQA +GS  S   
Subjt:  RLPNKSCDDINRLCAQFCWGYSGNKKRAHWMSWKKLCQSKHVGGFGFRDFKLFNQATLSKISWRLTCFPNSLLANILRGRYYKNRDFLQAPIGSNSSLTR

Query:  RSIIWGKELFLKDYRWKVENGSQVYITKDPWIARQGSHLPLWTSEDLEDKRVSFFLHEDLKWNEPLIRSILIPSDAE
        RSIIWG+++ +   RW++  G +V I K  WI R  +  P+       D  V+  + E+ KW E LI+      DAE
Subjt:  RSIIWGKELFLKDYRWKVENGSQVYITKDPWIARQGSHLPLWTSEDLEDKRVSFFLHEDLKWNEPLIRSILIPSDAE

A0A6J1CV63 uncharacterized protein LOC1110146621.8e-3952.41Show/hide
Query:  SGKCCRLPNKSCDDINRLCAQFCWGYSGNKKRAHWMSWKKLCQSKHVGGFGFRDFKLFNQATLSKISWRLTCFPNSLLANILRGRYYKNRDFLQAPIGSN
        S  C R P   C +IN L A+F WG +  +K+ HW SWK+LC SK  GG GF+D  +FNQA L+K SW++   PNSLL  +LRG+Y+K+ +F+ A +GSN
Subjt:  SGKCCRLPNKSCDDINRLCAQFCWGYSGNKKRAHWMSWKKLCQSKHVGGFGFRDFKLFNQATLSKISWRLTCFPNSLLANILRGRYYKNRDFLQAPIGSN

Query:  SSLTRRSIIWGKELFLKDYRWKVENGSQVYITKDPWIARQGSHLP
         S   RSI+WGKELF+K  RW++ NG  V I  DPWI R+GS LP
Subjt:  SSLTRRSIIWGKELFLKDYRWKVENGSQVYITKDPWIARQGSHLP

A0A6J1DRA0 uncharacterized protein LOC1110224237.8e-4342Show/hide
Query:  IKTISLQRSKTESGKCCRLPNKSCDDINRLCAQFCWGYSGNKKRAHWMSWKKLCQSKHVGGFGFRDFKLFNQATLSKISWRLTCFPNSLLANILRGRYYK
        IKT++ Q     +  C +LP   C++++++  +F WG S   ++ HW SWK LC  K +GG GFRD  +FNQA L+K SWR+   P+SLLA  LRG+Y+K
Subjt:  IKTISLQRSKTESGKCCRLPNKSCDDINRLCAQFCWGYSGNKKRAHWMSWKKLCQSKHVGGFGFRDFKLFNQATLSKISWRLTCFPNSLLANILRGRYYK

Query:  NRDFLQAPIGSNSSLTRRSIIWGKELFLKDYRWKVENGSQVYITKDPWIARQGSHLPLWTSEDLEDKRVSFFLHEDLKWNEPLIRSILIPSDAEDILNTP
           FLQA +G+  S   RSI+WG++LF K YRWKV NG  + ++ DPW+ R G+  P++T   + +  V++ +    +W+E  +R   I S+A+ IL TP
Subjt:  NRDFLQAPIGSNSSLTRRSIIWGKELFLKDYRWKVENGSQVYITKDPWIARQGSHLPLWTSEDLEDKRVSFFLHEDLKWNEPLIRSILIPSDAEDILNTP

A0A803NU06 Uncharacterized protein2.2e-3741.12Show/hide
Query:  ISLQRSKTESGKCCRLPNKSCDDINRLCAQFCWGYSGNKKRAHWMSWKKLCQSKHVGGFGFRDFKLFNQATLSKISWRLTCFPNSLLANILRGRYYKNRD
        + +Q   T +  C RL  K C+ +  + A F WG + N  + HW  WK LC+SK+ GG GFR F  FNQA L+K +WR+   P+SLL+ +L+ RY+ N  
Subjt:  ISLQRSKTESGKCCRLPNKSCDDINRLCAQFCWGYSGNKKRAHWMSWKKLCQSKHVGGFGFRDFKLFNQATLSKISWRLTCFPNSLLANILRGRYYKNRD

Query:  FLQAPIGSNSSLTRRSIIWGKELFLKDYRWKVENGSQVYITKDPWIARQGSHLPLWTSEDLEDKRVSFFLHEDLKWNEPLIRSILIPSDAEDILNTP
        FL A IG + SLT +SI WGKEL +K  R+KV NG+ +    DPWI+      P+  S       VS F+ E+  WN P++     P D++ IL  P
Subjt:  FLQAPIGSNSSLTRRSIIWGKELFLKDYRWKVENGSQVYITKDPWIARQGSHLPLWTSEDLEDKRVSFFLHEDLKWNEPLIRSILIPSDAEDILNTP

A0A803Q6Z2 Uncharacterized protein9.9e-3840Show/hide
Query:  LQRSKTESGKCCRLPNKSCDDINRLCAQFCWGYSGNKKRAHWMSWKKLCQSKHVGGFGFRDFKLFNQATLSKISWRLTCFPNSLLANILRGRYYKNRDFL
        +Q   T +  C +LP K C+ I +L ++F WG S N    HW +WK LC+SK  GG GFR+F  FNQA L+K +WR+   P+SL+A +L+ RY+    FL
Subjt:  LQRSKTESGKCCRLPNKSCDDINRLCAQFCWGYSGNKKRAHWMSWKKLCQSKHVGGFGFRDFKLFNQATLSKISWRLTCFPNSLLANILRGRYYKNRDFL

Query:  QAPIGSNSSLTRRSIIWGKELFLKDYRWKVENGSQVYITKDPWIARQGSHLPLWTSEDLEDKRVSFFLHEDLKWNEPLIRSILIPSDAEDILNTP
        +A  G+  SLT +SI+WGKEL LK  RW++ +G+ V     PWI    +  PL       D +V+ F+    +W+ P ++    P D + IL+ P
Subjt:  QAPIGSNSSLTRRSIIWGKELFLKDYRWKVENGSQVYITKDPWIARQGSHLPLWTSEDLEDKRVSFFLHEDLKWNEPLIRSILIPSDAEDILNTP

SwissProt top hitse value%identityAlignment
P0C2F6 Putative ribonuclease H protein At1g657509.6e-1432.59Show/hide
Query:  LPNKSCDDINRLCAQFCWGYSGNKKRAHWMSWKKLCQSKHVGGFGFRDFKLFNQATLSKISWRLTCFPNSLLANILRGRYY--KNRDF-LQAPIGSNSSL
        LP    + +++L   F WG +  KK+ H + W K+C  K  GG G R  K  N+A +SK+ WRL    NSL   +L+ +Y+  + RD     P GS SS 
Subjt:  LPNKSCDDINRLCAQFCWGYSGNKKRAHWMSWKKLCQSKHVGGFGFRDFKLFNQATLSKISWRLTCFPNSLLANILRGRYY--KNRDF-LQAPIGSNSSL

Query:  TRRSIIWGKELFLKDYRWKVENGSQVYITKDPWIA
         R   I  +++      W   +G Q+    D W++
Subjt:  TRRSIIWGKELFLKDYRWKVENGSQVYITKDPWIA

P93295 Uncharacterized mitochondrial protein AtMg003104.8e-2135.42Show/hide
Query:  CCRLPNKSCDDINRLCAQFCWGYSGNKKRAHWMSWKKLCQSKH-VGGFGFRDFKLFNQATLSKISWRLTCFPNSLLANILRGRYYKNRDFLQAPIGSNSS
        C RL    C  +     +F W    NK++  W++W+KLC+SK   GG GFRD   FNQA L+K S+R+   P++LL+ +LR RY+ +   ++  +G+  S
Subjt:  CCRLPNKSCDDINRLCAQFCWGYSGNKKRAHWMSWKKLCQSKH-VGGFGFRDFKLFNQATLSKISWRLTCFPNSLLANILRGRYYKNRDFLQAPIGSNSS

Query:  LTRRSIIWGKELFLKDYRWKVENGSQVYITKDPWIARQGSHLPL
           RSII G+EL  +     + +G    +  D WI  +    PL
Subjt:  LTRRSIIWGKELFLKDYRWKVENGSQVYITKDPWIARQGSHLPL

Arabidopsis top hitse value%identityAlignment
AT4G29090.1 Ribonuclease H-like superfamily protein1.9e-2035.82Show/hide
Query:  CCRLPNKSCDDINRLCAQFCWGYSGNKKRAHWMSWKKLCQSKHVGGFGFRDFKLFNQATLSKISWRLTCFPNSLLANILRGRYYKNRDFLQAPIGSNSSL
        C  LP   C  I  + A F W      K  HW +W  L   K  GG GF+D + FN A L K  WR+   P SL+A + + RY+   D L AP+GS  S 
Subjt:  CCRLPNKSCDDINRLCAQFCWGYSGNKKRAHWMSWKKLCQSKHVGGFGFRDFKLFNQATLSKISWRLTCFPNSLLANILRGRYYKNRDFLQAPIGSNSSL

Query:  TRRSIIWGKELFLKDYRWKVENGSQVYITKDPWI
          +SI   +E+  +  R  V NG  + I +  W+
Subjt:  TRRSIIWGKELFLKDYRWKVENGSQVYITKDPWI

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein3.4e-2235.42Show/hide
Query:  CCRLPNKSCDDINRLCAQFCWGYSGNKKRAHWMSWKKLCQSKH-VGGFGFRDFKLFNQATLSKISWRLTCFPNSLLANILRGRYYKNRDFLQAPIGSNSS
        C RL    C  +     +F W    NK++  W++W+KLC+SK   GG GFRD   FNQA L+K S+R+   P++LL+ +LR RY+ +   ++  +G+  S
Subjt:  CCRLPNKSCDDINRLCAQFCWGYSGNKKRAHWMSWKKLCQSKH-VGGFGFRDFKLFNQATLSKISWRLTCFPNSLLANILRGRYYKNRDFLQAPIGSNSS

Query:  LTRRSIIWGKELFLKDYRWKVENGSQVYITKDPWIARQGSHLPL
           RSII G+EL  +     + +G    +  D WI  +    PL
Subjt:  LTRRSIIWGKELFLKDYRWKVENGSQVYITKDPWIARQGSHLPL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGAAATAAAAACCATCTCTTTGCAAAGATCAAAGACAGAATCTGGAAAATGCTGCAGGCTCCCTAACAAGTCTTGTGATGATATTAATCGTCTGTGTGCTCAATT
TTGCTGGGGGTATTCGGGGAACAAGAAAAGAGCTCATTGGATGAGCTGGAAGAAGCTCTGTCAAAGTAAACATGTTGGGGGCTTTGGATTTCGTGATTTTAAACTGTTTA
ACCAGGCTACTCTATCAAAGATCAGTTGGAGGCTTACTTGTTTCCCTAATAGCCTTTTAGCTAATATTTTGCGAGGAAGATATTATAAAAATAGAGATTTTCTCCAAGCT
CCTATTGGCTCCAATTCGTCTCTCACCAGGAGAAGTATCATTTGGGGAAAGGAGTTATTCCTAAAAGACTATAGATGGAAAGTTGAGAATGGATCCCAAGTTTACATCAC
TAAAGATCCTTGGATCGCAAGACAAGGGAGTCACCTTCCTTTGTGGACATCAGAAGACCTTGAGGATAAAAGGGTGAGCTTCTTTCTCCATGAGGATCTAAAATGGAATG
AGCCCCTAATCAGATCAATCTTAATCCCTAGTGATGCTGAGGATATCTTAAATACCCCTCCGGGATGGAGAAGAGTTAAAAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAGAAATAAAAACCATCTCTTTGCAAAGATCAAAGACAGAATCTGGAAAATGCTGCAGGCTCCCTAACAAGTCTTGTGATGATATTAATCGTCTGTGTGCTCAATT
TTGCTGGGGGTATTCGGGGAACAAGAAAAGAGCTCATTGGATGAGCTGGAAGAAGCTCTGTCAAAGTAAACATGTTGGGGGCTTTGGATTTCGTGATTTTAAACTGTTTA
ACCAGGCTACTCTATCAAAGATCAGTTGGAGGCTTACTTGTTTCCCTAATAGCCTTTTAGCTAATATTTTGCGAGGAAGATATTATAAAAATAGAGATTTTCTCCAAGCT
CCTATTGGCTCCAATTCGTCTCTCACCAGGAGAAGTATCATTTGGGGAAAGGAGTTATTCCTAAAAGACTATAGATGGAAAGTTGAGAATGGATCCCAAGTTTACATCAC
TAAAGATCCTTGGATCGCAAGACAAGGGAGTCACCTTCCTTTGTGGACATCAGAAGACCTTGAGGATAAAAGGGTGAGCTTCTTTCTCCATGAGGATCTAAAATGGAATG
AGCCCCTAATCAGATCAATCTTAATCCCTAGTGATGCTGAGGATATCTTAAATACCCCTCCGGGATGGAGAAGAGTTAAAAGATGA
Protein sequenceShow/hide protein sequence
MGEIKTISLQRSKTESGKCCRLPNKSCDDINRLCAQFCWGYSGNKKRAHWMSWKKLCQSKHVGGFGFRDFKLFNQATLSKISWRLTCFPNSLLANILRGRYYKNRDFLQA
PIGSNSSLTRRSIIWGKELFLKDYRWKVENGSQVYITKDPWIARQGSHLPLWTSEDLEDKRVSFFLHEDLKWNEPLIRSILIPSDAEDILNTPPGWRRVKR