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Tan0002833 (gene) of Snake gourd v1 genome

Gene IDTan0002833
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionPlant transposase
Genome locationLG03:32385804..32386808
RNA-Seq ExpressionTan0002833
SyntenyTan0002833
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_038904085.1 uncharacterized protein LOC120090469 isoform X1 [Benincasa hispida]5.4e-2057.58Show/hide
Query:  QRLDSIGQAPLNVERSSGVEVNIDASEQILKHPSKKCRGATKMKAIAVGEHRKIDITFNEYGQPIGEVSVEMSSFLDSLVREVVPVTLQDWRKLSTRLK
        Q+L S GQ    ++RS  V  +I+ASE  ++   KKCRG TKM   A+ E  K+DITFNE+GQPIGE S+ +SSFL  LVRE VPVTL DWRKLST  K
Subjt:  QRLDSIGQAPLNVERSSGVEVNIDASEQILKHPSKKCRGATKMKAIAVGEHRKIDITFNEYGQPIGEVSVEMSSFLDSLVREVVPVTLQDWRKLSTRLK

XP_038904087.1 uncharacterized protein LOC120090469 isoform X2 [Benincasa hispida]5.4e-2057.58Show/hide
Query:  QRLDSIGQAPLNVERSSGVEVNIDASEQILKHPSKKCRGATKMKAIAVGEHRKIDITFNEYGQPIGEVSVEMSSFLDSLVREVVPVTLQDWRKLSTRLK
        Q+L S GQ    ++RS  V  +I+ASE  ++   KKCRG TKM   A+ E  K+DITFNE+GQPIGE S+ +SSFL  LVRE VPVTL DWRKLST  K
Subjt:  QRLDSIGQAPLNVERSSGVEVNIDASEQILKHPSKKCRGATKMKAIAVGEHRKIDITFNEYGQPIGEVSVEMSSFLDSLVREVVPVTLQDWRKLSTRLK

XP_038904088.1 uncharacterized protein LOC120090469 isoform X3 [Benincasa hispida]5.4e-2057.58Show/hide
Query:  QRLDSIGQAPLNVERSSGVEVNIDASEQILKHPSKKCRGATKMKAIAVGEHRKIDITFNEYGQPIGEVSVEMSSFLDSLVREVVPVTLQDWRKLSTRLK
        Q+L S GQ    ++RS  V  +I+ASE  ++   KKCRG TKM   A+ E  K+DITFNE+GQPIGE S+ +SSFL  LVRE VPVTL DWRKLST  K
Subjt:  QRLDSIGQAPLNVERSSGVEVNIDASEQILKHPSKKCRGATKMKAIAVGEHRKIDITFNEYGQPIGEVSVEMSSFLDSLVREVVPVTLQDWRKLSTRLK

XP_038904089.1 uncharacterized protein LOC120090469 isoform X4 [Benincasa hispida]5.4e-2057.58Show/hide
Query:  QRLDSIGQAPLNVERSSGVEVNIDASEQILKHPSKKCRGATKMKAIAVGEHRKIDITFNEYGQPIGEVSVEMSSFLDSLVREVVPVTLQDWRKLSTRLK
        Q+L S GQ    ++RS  V  +I+ASE  ++   KKCRG TKM   A+ E  K+DITFNE+GQPIGE S+ +SSFL  LVRE VPVTL DWRKLST  K
Subjt:  QRLDSIGQAPLNVERSSGVEVNIDASEQILKHPSKKCRGATKMKAIAVGEHRKIDITFNEYGQPIGEVSVEMSSFLDSLVREVVPVTLQDWRKLSTRLK

XP_038904090.1 uncharacterized protein LOC120090469 isoform X5 [Benincasa hispida]5.4e-2057.58Show/hide
Query:  QRLDSIGQAPLNVERSSGVEVNIDASEQILKHPSKKCRGATKMKAIAVGEHRKIDITFNEYGQPIGEVSVEMSSFLDSLVREVVPVTLQDWRKLSTRLK
        Q+L S GQ    ++RS  V  +I+ASE  ++   KKCRG TKM   A+ E  K+DITFNE+GQPIGE S+ +SSFL  LVRE VPVTL DWRKLST  K
Subjt:  QRLDSIGQAPLNVERSSGVEVNIDASEQILKHPSKKCRGATKMKAIAVGEHRKIDITFNEYGQPIGEVSVEMSSFLDSLVREVVPVTLQDWRKLSTRLK

TrEMBL top hitse value%identityAlignment
A0A1S4DZ18 uncharacterized protein LOC103493280 isoform X35.8e-2056.12Show/hide
Query:  RLDSIGQAPLNVERSSGVEVNIDASEQILKHPSKKCRGATKMKAIAVGEHRKIDITFNEYGQPIGEVSVEMSSFLDSLVREVVPVTLQDWRKLSTRLK
        +L S GQ    ++RS  V   I+ SE  ++   KK RG TKMK IA+ E  K+DITF+++GQPIGE S+ +SSFL +LVRE+VPVTL DWRKLSTR K
Subjt:  RLDSIGQAPLNVERSSGVEVNIDASEQILKHPSKKCRGATKMKAIAVGEHRKIDITFNEYGQPIGEVSVEMSSFLDSLVREVVPVTLQDWRKLSTRLK

A0A1S4DZ32 uncharacterized protein LOC103493280 isoform X65.8e-2056.12Show/hide
Query:  RLDSIGQAPLNVERSSGVEVNIDASEQILKHPSKKCRGATKMKAIAVGEHRKIDITFNEYGQPIGEVSVEMSSFLDSLVREVVPVTLQDWRKLSTRLK
        +L S GQ    ++RS  V   I+ SE  ++   KK RG TKMK IA+ E  K+DITF+++GQPIGE S+ +SSFL +LVRE+VPVTL DWRKLSTR K
Subjt:  RLDSIGQAPLNVERSSGVEVNIDASEQILKHPSKKCRGATKMKAIAVGEHRKIDITFNEYGQPIGEVSVEMSSFLDSLVREVVPVTLQDWRKLSTRLK

A0A1S4DZ36 uncharacterized protein LOC103493280 isoform X15.8e-2056.12Show/hide
Query:  RLDSIGQAPLNVERSSGVEVNIDASEQILKHPSKKCRGATKMKAIAVGEHRKIDITFNEYGQPIGEVSVEMSSFLDSLVREVVPVTLQDWRKLSTRLK
        +L S GQ    ++RS  V   I+ SE  ++   KK RG TKMK IA+ E  K+DITF+++GQPIGE S+ +SSFL +LVRE+VPVTL DWRKLSTR K
Subjt:  RLDSIGQAPLNVERSSGVEVNIDASEQILKHPSKKCRGATKMKAIAVGEHRKIDITFNEYGQPIGEVSVEMSSFLDSLVREVVPVTLQDWRKLSTRLK

A0A1S4DZ41 uncharacterized protein LOC103493280 isoform X55.8e-2056.12Show/hide
Query:  RLDSIGQAPLNVERSSGVEVNIDASEQILKHPSKKCRGATKMKAIAVGEHRKIDITFNEYGQPIGEVSVEMSSFLDSLVREVVPVTLQDWRKLSTRLK
        +L S GQ    ++RS  V   I+ SE  ++   KK RG TKMK IA+ E  K+DITF+++GQPIGE S+ +SSFL +LVRE+VPVTL DWRKLSTR K
Subjt:  RLDSIGQAPLNVERSSGVEVNIDASEQILKHPSKKCRGATKMKAIAVGEHRKIDITFNEYGQPIGEVSVEMSSFLDSLVREVVPVTLQDWRKLSTRLK

A0A5D3D4T6 Plant transposase5.8e-2056.12Show/hide
Query:  RLDSIGQAPLNVERSSGVEVNIDASEQILKHPSKKCRGATKMKAIAVGEHRKIDITFNEYGQPIGEVSVEMSSFLDSLVREVVPVTLQDWRKLSTRLK
        +L S GQ    ++RS  V   I+ SE  ++   KK RG TKMK IA+ E  K+DITF+++GQPIGE S+ +SSFL +LVRE+VPVTL DWRKLSTR K
Subjt:  RLDSIGQAPLNVERSSGVEVNIDASEQILKHPSKKCRGATKMKAIAVGEHRKIDITFNEYGQPIGEVSVEMSSFLDSLVREVVPVTLQDWRKLSTRLK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTCAAAGGTTAGATTCTATCGGTCAAGCTCCACTAAATGTAGAAAGATCTTCGGGTGTAGAAGTCAATATTGATGCATCTGAACAAATTTTAAAACATCCATCCAA
GAAATGTAGAGGAGCTACAAAAATGAAAGCTATTGCAGTTGGGGAACATAGAAAAATAGATATAACATTCAATGAGTATGGACAACCGATTGGAGAGGTTTCAGTTGAGA
TGTCTTCATTTTTGGACTCACTCGTGAGAGAGGTAGTGCCTGTGACTTTACAAGATTGGAGGAAATTGTCTACACGATTGAAGTAA
mRNA sequenceShow/hide mRNA sequence
AGTAAATGTCTTAGCTTCGATTCAAATGCTCCACGAAAACGACAATCTAAGCGATTGAAAAACTAACAAGTAAAGAAGATGATGATGATGGAACACTGAATGATAAGGAA
GGAGATCACGTTACTGATAAGTTGTGTGTTGACCAATCTCAAGATTACTCACCAGCTGGAGAAGAGTCATTGAATGATGCAGAGAATTGTGATACTACTCACATGACTCA
AAGGTTAGATTCTATCGGTCAAGCTCCACTAAATGTAGAAAGATCTTCGGGTGTAGAAGTCAATATTGATGCATCTGAACAAATTTTAAAACATCCATCCAAGAAATGTA
GAGGAGCTACAAAAATGAAAGCTATTGCAGTTGGGGAACATAGAAAAATAGATATAACATTCAATGAGTATGGACAACCGATTGGAGAGGTTTCAGTTGAGATGTCTTCA
TTTTTGGACTCACTCGTGAGAGAGGTAGTGCCTGTGACTTTACAAGATTGGAGGAAATTGTCTACACGATTGAAGTAAATTTTATGGACTTCAATTCAATCAAGATATAA
GATGAAGGAAGATTGGAAAAGAAAGTATATTTTTCAAAAGATGGGTAGATTATGGAGGGCAGGTAAATCTCGAATTGTGTCACAAATTAAAAATGCCTCCAATGATGAGG
AGCTTGTTAAATTGAAGCCAACCAATATACAATCTATGCATTATTGGATGGACTTTGTGAAAGAAAAGAAGAGCGCAAGGTTCAAGGTAATCTCATGTCATTCACTTTAA
CCACATACTATTATAACTAAAGTGTCTATTATTCAAATTTTGTTTCACATGTATATTTGATTAGACAAAAAGTGAAAAATTCAAATCCATGAAGAATAAGCAACTTCCAC
ATACATGTAACCGTAAGGGCTATGCTCGATTGGCC
Protein sequenceShow/hide protein sequence
MTQRLDSIGQAPLNVERSSGVEVNIDASEQILKHPSKKCRGATKMKAIAVGEHRKIDITFNEYGQPIGEVSVEMSSFLDSLVREVVPVTLQDWRKLSTRLK