CuGenDBv2

Gene ID	Tan0002849
Organism	Trichosanthes anguina (Snake gourd v1)
Description	60S ribosomal protein L7a
Genome location	LG06:77268430..77269198
RNA-Seq Expression	Tan0002849
Synteny	Tan0002849
Gene Ontology terms	GO:0000470 - maturation of LSU-rRNA (biological process) GO:0022625 - cytosolic large ribosomal subunit (cellular component) GO:0003723 - RNA binding (molecular function)
InterPro domains	IPR004038 - Ribosomal protein L7Ae/L30e/S12e/Gadd45 IPR029064 - 50S ribosomal protein L30e-like

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6579662.1 60S ribosomal protein L7a-2, partial [Cucurbita argyrosperma subsp. sororia]

2.3e-42

71.92

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Query:  MLLKYRPKDKAHKRESLLKRAYEEL----------IVVKYGLNHVTYLIE----QLVVIAHDVDLIKLVVWLRALCRKMKILYCI---------IVHKKI
        MLLKYRP+DKA KRE LLKRA EE           IVVKYGLNHVTYLIE    QLVVIAHDVD I+LVVWL ALCRKM+I YCI         IVHKK 
Subjt:  MLLKYRPKDKAHKRESLLKRAYEEL----------IVVKYGLNHVTYLIE----QLVVIAHDVDLIKLVVWLRALCRKMKILYCI---------IVHKKI

Query:  ASVLCLTTVQNKDQMEFNRILEAIKANFNDKYDQYKKKWGGEIMGS
        ASVLCLTTV+N+D+MEF+RILEAIKANFNDKYD+Y+KKWGG IMGS
Subjt:  ASVLCLTTVQNKDQMEFNRILEAIKANFNDKYDQYKKKWGGEIMGS

KAG7017114.1 60S ribosomal protein L7a-2, partial [Cucurbita argyrosperma subsp. argyrosperma]

2.3e-42

71.92

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Query:  MLLKYRPKDKAHKRESLLKRAYEEL----------IVVKYGLNHVTYLIE----QLVVIAHDVDLIKLVVWLRALCRKMKILYCI---------IVHKKI
        MLLKYRP+DKA KRE LLKRA EE           IVVKYGLNHVTYLIE    QLVVIAHDVD I+LVVWL ALCRKM+I YCI         IVHKK 
Subjt:  MLLKYRPKDKAHKRESLLKRAYEEL----------IVVKYGLNHVTYLIE----QLVVIAHDVDLIKLVVWLRALCRKMKILYCI---------IVHKKI

Query:  ASVLCLTTVQNKDQMEFNRILEAIKANFNDKYDQYKKKWGGEIMGS
        ASVLCLTTV+N+D+MEF+RILEAIKANFNDKYD+Y+KKWGG IMGS
Subjt:  ASVLCLTTVQNKDQMEFNRILEAIKANFNDKYDQYKKKWGGEIMGS

XP_022928909.1 60S ribosomal protein L7a-2-like isoform X2 [Cucurbita moschata]

2.3e-42

71.92

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Query:  MLLKYRPKDKAHKRESLLKRAYEEL----------IVVKYGLNHVTYLIE----QLVVIAHDVDLIKLVVWLRALCRKMKILYCI---------IVHKKI
        MLLKYRP+DKA KRE LLKRA EE           IVVKYGLNHVTYLIE    QLVVIAHDVD I+LVVWL ALCRKM+I YCI         IVHKK 
Subjt:  MLLKYRPKDKAHKRESLLKRAYEEL----------IVVKYGLNHVTYLIE----QLVVIAHDVDLIKLVVWLRALCRKMKILYCI---------IVHKKI

Query:  ASVLCLTTVQNKDQMEFNRILEAIKANFNDKYDQYKKKWGGEIMGS
        ASVLCLTTV+N+D+MEF+RILEAIKANFNDKYD+Y+KKWGG IMGS
Subjt:  ASVLCLTTVQNKDQMEFNRILEAIKANFNDKYDQYKKKWGGEIMGS

XP_022970188.1 60S ribosomal protein L7a-2-like [Cucurbita maxima]

3.0e-42

71.23

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Query:  MLLKYRPKDKAHKRESLLKRAYEEL----------IVVKYGLNHVTYLIE----QLVVIAHDVDLIKLVVWLRALCRKMKILYCI---------IVHKKI
        MLLKYRP+DKA KRE LLKRA EE           IV+KYGLNHVTYLIE    QLVVIAHDVD I+LVVWL ALCRKM+I YCI         IVHKK 
Subjt:  MLLKYRPKDKAHKRESLLKRAYEEL----------IVVKYGLNHVTYLIE----QLVVIAHDVDLIKLVVWLRALCRKMKILYCI---------IVHKKI

Query:  ASVLCLTTVQNKDQMEFNRILEAIKANFNDKYDQYKKKWGGEIMGS
        ASVLCLTTV+N+D+MEF+RILEAIKANFNDKYD+Y+KKWGG IMGS
Subjt:  ASVLCLTTVQNKDQMEFNRILEAIKANFNDKYDQYKKKWGGEIMGS

XP_023551212.1 60S ribosomal protein L7a-2-like [Cucurbita pepo subsp. pepo]

2.3e-42

71.92

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Query:  MLLKYRPKDKAHKRESLLKRAYEEL----------IVVKYGLNHVTYLIE----QLVVIAHDVDLIKLVVWLRALCRKMKILYCI---------IVHKKI
        MLLKYRP+DKA KRE LLKRA EE           IVVKYGLNHVTYLIE    QLVVIAHDVD I+LVVWL ALCRKM+I YCI         IVHKK 
Subjt:  MLLKYRPKDKAHKRESLLKRAYEEL----------IVVKYGLNHVTYLIE----QLVVIAHDVDLIKLVVWLRALCRKMKILYCI---------IVHKKI

Query:  ASVLCLTTVQNKDQMEFNRILEAIKANFNDKYDQYKKKWGGEIMGS
        ASVLCLTTV+N+D+MEF+RILEAIKANFNDKYD+Y+KKWGG IMGS
Subjt:  ASVLCLTTVQNKDQMEFNRILEAIKANFNDKYDQYKKKWGGEIMGS

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CUE8 60S ribosomal protein L7a

4.2e-42

70.55

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Query:  MLLKYRPKDKAHKRESLLKRAYEEL----------IVVKYGLNHVTYLIE----QLVVIAHDVDLIKLVVWLRALCRKMKILYCI---------IVHKKI
        MLLKYRP+DK  KRE LLKRA EE           IVVKYGLNHVTYLIE    QLVVIAHDVD I+LVVWL ALCRKM+I YCI         +VHKK 
Subjt:  MLLKYRPKDKAHKRESLLKRAYEEL----------IVVKYGLNHVTYLIE----QLVVIAHDVDLIKLVVWLRALCRKMKILYCI---------IVHKKI

Query:  ASVLCLTTVQNKDQMEFNRILEAIKANFNDKYDQYKKKWGGEIMGS
        ASVLCLTTV+N+D+MEF+RILEAIKANFNDKYD+Y+KKWGG IMGS
Subjt:  ASVLCLTTVQNKDQMEFNRILEAIKANFNDKYDQYKKKWGGEIMGS

A0A5D3DB00 60S ribosomal protein L7a

4.2e-42

70.55

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Query:  MLLKYRPKDKAHKRESLLKRAYEEL----------IVVKYGLNHVTYLIE----QLVVIAHDVDLIKLVVWLRALCRKMKILYCI---------IVHKKI
        MLLKYRP+DK  KRE LLKRA EE           IVVKYGLNHVTYLIE    QLVVIAHDVD I+LVVWL ALCRKM+I YCI         +VHKK 
Subjt:  MLLKYRPKDKAHKRESLLKRAYEEL----------IVVKYGLNHVTYLIE----QLVVIAHDVDLIKLVVWLRALCRKMKILYCI---------IVHKKI

Query:  ASVLCLTTVQNKDQMEFNRILEAIKANFNDKYDQYKKKWGGEIMGS
        ASVLCLTTV+N+D+MEF+RILEAIKANFNDKYD+Y+KKWGG IMGS
Subjt:  ASVLCLTTVQNKDQMEFNRILEAIKANFNDKYDQYKKKWGGEIMGS

A0A6J1DV46 60S ribosomal protein L7a

2.5e-42

71.23

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Query:  MLLKYRPKDKAHKRESLLKRAYEEL----------IVVKYGLNHVTYLIE----QLVVIAHDVDLIKLVVWLRALCRKMKILYCI---------IVHKKI
        MLLKYRP+DKA KRE LLKRA EE           IVVKYGLNHVTYLIE    QLVVIAHDVD I+LVVWL ALCRKM+I YCI         IVHKK 
Subjt:  MLLKYRPKDKAHKRESLLKRAYEEL----------IVVKYGLNHVTYLIE----QLVVIAHDVDLIKLVVWLRALCRKMKILYCI---------IVHKKI

Query:  ASVLCLTTVQNKDQMEFNRILEAIKANFNDKYDQYKKKWGGEIMGS
        ASVLCLTTV+N+D++EF+RILEAIKANFNDKYD+Y+KKWGG IMGS
Subjt:  ASVLCLTTVQNKDQMEFNRILEAIKANFNDKYDQYKKKWGGEIMGS

A0A6J1EM71 60S ribosomal protein L7a

1.1e-42

71.92

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Query:  MLLKYRPKDKAHKRESLLKRAYEEL----------IVVKYGLNHVTYLIE----QLVVIAHDVDLIKLVVWLRALCRKMKILYCI---------IVHKKI
        MLLKYRP+DKA KRE LLKRA EE           IVVKYGLNHVTYLIE    QLVVIAHDVD I+LVVWL ALCRKM+I YCI         IVHKK 
Subjt:  MLLKYRPKDKAHKRESLLKRAYEEL----------IVVKYGLNHVTYLIE----QLVVIAHDVDLIKLVVWLRALCRKMKILYCI---------IVHKKI

Query:  ASVLCLTTVQNKDQMEFNRILEAIKANFNDKYDQYKKKWGGEIMGS
        ASVLCLTTV+N+D+MEF+RILEAIKANFNDKYD+Y+KKWGG IMGS
Subjt:  ASVLCLTTVQNKDQMEFNRILEAIKANFNDKYDQYKKKWGGEIMGS

A0A6J1I354 60S ribosomal protein L7a

1.4e-42

71.23

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Query:  MLLKYRPKDKAHKRESLLKRAYEEL----------IVVKYGLNHVTYLIE----QLVVIAHDVDLIKLVVWLRALCRKMKILYCI---------IVHKKI
        MLLKYRP+DKA KRE LLKRA EE           IV+KYGLNHVTYLIE    QLVVIAHDVD I+LVVWL ALCRKM+I YCI         IVHKK 
Subjt:  MLLKYRPKDKAHKRESLLKRAYEEL----------IVVKYGLNHVTYLIE----QLVVIAHDVDLIKLVVWLRALCRKMKILYCI---------IVHKKI

Query:  ASVLCLTTVQNKDQMEFNRILEAIKANFNDKYDQYKKKWGGEIMGS
        ASVLCLTTV+N+D+MEF+RILEAIKANFNDKYD+Y+KKWGG IMGS
Subjt:  ASVLCLTTVQNKDQMEFNRILEAIKANFNDKYDQYKKKWGGEIMGS

SwissProt top hits

e value

%identity

Alignment

P0DKK7 60S ribosomal protein L7a-2

1.2e-41

66.44

Show/hide

Query:  MLLKYRPKDKAHKRESLLKRAYEEL----------IVVKYGLNHVTYLIE----QLVVIAHDVDLIKLVVWLRALCRKMKILYCI---------IVHKKI
        MLLKYRP+DKA K+E LLKRA  E           IVVKYGLNHVTYLIE    QLVVIAHDVD I+LVVWL ALCRKM++ YCI         IVHKK 
Subjt:  MLLKYRPKDKAHKRESLLKRAYEEL----------IVVKYGLNHVTYLIE----QLVVIAHDVDLIKLVVWLRALCRKMKILYCI---------IVHKKI

Query:  ASVLCLTTVQNKDQMEFNRILEAIKANFNDKYDQYKKKWGGEIMGS
        ASVLCLTTV+N+D++EF++ILEAIKANFNDK+D+ +KKWGG +MGS
Subjt:  ASVLCLTTVQNKDQMEFNRILEAIKANFNDKYDQYKKKWGGEIMGS

P35685 60S ribosomal protein L7a-1

1.2e-41

66.44

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Query:  MLLKYRPKDKAHKRESLLKRAYEEL----------IVVKYGLNHVTYLIE----QLVVIAHDVDLIKLVVWLRALCRKMKILYCI---------IVHKKI
        MLLKYRP+DKA K+E LLKRA  E           IVVKYGLNHVTYLIE    QLVVIAHDVD I+LVVWL ALCRKM++ YCI         IVHKK 
Subjt:  MLLKYRPKDKAHKRESLLKRAYEEL----------IVVKYGLNHVTYLIE----QLVVIAHDVDLIKLVVWLRALCRKMKILYCI---------IVHKKI

Query:  ASVLCLTTVQNKDQMEFNRILEAIKANFNDKYDQYKKKWGGEIMGS
        ASVLCLTTV+N+D++EF++ILEAIKANFNDK+D+ +KKWGG +MGS
Subjt:  ASVLCLTTVQNKDQMEFNRILEAIKANFNDKYDQYKKKWGGEIMGS

P49692 60S ribosomal protein L7a-1

2.2e-40

63.7

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Query:  MLLKYRPKDKAHKRESLLKRAYEEL----------IVVKYGLNHVTYLIE----QLVVIAHDVDLIKLVVWLRALCRKMKILYCI---------IVHKKI
        +LLKYRP+DKA K+E L+K+A  E           IVVKYGLNHVTYLIE    QLVVIAHDVD I+LVVWL ALCRKM++ YCI         +VH+K 
Subjt:  MLLKYRPKDKAHKRESLLKRAYEEL----------IVVKYGLNHVTYLIE----QLVVIAHDVDLIKLVVWLRALCRKMKILYCI---------IVHKKI

Query:  ASVLCLTTVQNKDQMEFNRILEAIKANFNDKYDQYKKKWGGEIMGS
        AS LCLTTV+N+D++EF++ILEAIKANFNDKY++Y+KKWGG IMGS
Subjt:  ASVLCLTTVQNKDQMEFNRILEAIKANFNDKYDQYKKKWGGEIMGS

Q90YW2 60S ribosomal protein L7a

6.7e-21

42.66

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Query:  KYRPKDKAHKRESLLKRAYEELI-----------VVKYGLNHVTYLIE----QLVVIAHDVDLIKLVVWLRALCRKMKILYCII---------VHKKIAS
        KYRP+ K  K+  LL RA ++             VV+ G+N VT L+E    QLVVIAHDVD I+LV++L ALCRKM + YCI+         VH+K  +
Subjt:  KYRPKDKAHKRESLLKRAYEELI-----------VVKYGLNHVTYLIE----QLVVIAHDVDLIKLVVWLRALCRKMKILYCII---------VHKKIAS

Query:  VLCLTTVQNKDQMEFNRILEAIKANFNDKYDQYKKKWGGEIMG
         +C T    +D+    +++EAIK N+ND+Y++ ++ WGG IMG
Subjt:  VLCLTTVQNKDQMEFNRILEAIKANFNDKYDQYKKKWGGEIMG

Q9LZH9 60S ribosomal protein L7a-2

6.4e-40

63.01

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Query:  MLLKYRPKDKAHKRESLLKRAYEEL----------IVVKYGLNHVTYLIE----QLVVIAHDVDLIKLVVWLRALCRKMKILYCI---------IVHKKI
        +LLKYRP+DKA K+E LL +A  E           IVVKYGLNHVTYLIE    QLVVIAHDVD I+LVVWL ALCRKM++ YCI         +VH+K 
Subjt:  MLLKYRPKDKAHKRESLLKRAYEEL----------IVVKYGLNHVTYLIE----QLVVIAHDVDLIKLVVWLRALCRKMKILYCI---------IVHKKI

Query:  ASVLCLTTVQNKDQMEFNRILEAIKANFNDKYDQYKKKWGGEIMGS
        A+ LCLTTV+N+D++EF++ILEAIKANFNDKY++Y+KKWGG IMGS
Subjt:  ASVLCLTTVQNKDQMEFNRILEAIKANFNDKYDQYKKKWGGEIMGS

Arabidopsis top hits

e value

%identity

Alignment

AT2G47610.1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein

1.6e-41

63.7

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Query:  MLLKYRPKDKAHKRESLLKRAYEEL----------IVVKYGLNHVTYLIE----QLVVIAHDVDLIKLVVWLRALCRKMKILYCI---------IVHKKI
        +LLKYRP+DKA K+E L+K+A  E           IVVKYGLNHVTYLIE    QLVVIAHDVD I+LVVWL ALCRKM++ YCI         +VH+K 
Subjt:  MLLKYRPKDKAHKRESLLKRAYEEL----------IVVKYGLNHVTYLIE----QLVVIAHDVDLIKLVVWLRALCRKMKILYCI---------IVHKKI

Query:  ASVLCLTTVQNKDQMEFNRILEAIKANFNDKYDQYKKKWGGEIMGS
        AS LCLTTV+N+D++EF++ILEAIKANFNDKY++Y+KKWGG IMGS
Subjt:  ASVLCLTTVQNKDQMEFNRILEAIKANFNDKYDQYKKKWGGEIMGS

AT3G62870.1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein

4.6e-41

63.01

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Query:  MLLKYRPKDKAHKRESLLKRAYEEL----------IVVKYGLNHVTYLIE----QLVVIAHDVDLIKLVVWLRALCRKMKILYCI---------IVHKKI
        +LLKYRP+DKA K+E LL +A  E           IVVKYGLNHVTYLIE    QLVVIAHDVD I+LVVWL ALCRKM++ YCI         +VH+K 
Subjt:  MLLKYRPKDKAHKRESLLKRAYEEL----------IVVKYGLNHVTYLIE----QLVVIAHDVDLIKLVVWLRALCRKMKILYCI---------IVHKKI

Query:  ASVLCLTTVQNKDQMEFNRILEAIKANFNDKYDQYKKKWGGEIMGS
        A+ LCLTTV+N+D++EF++ILEAIKANFNDKY++Y+KKWGG IMGS
Subjt:  ASVLCLTTVQNKDQMEFNRILEAIKANFNDKYDQYKKKWGGEIMGS

Sequences

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CDS sequence

Show/hide CDS sequence

ATGCTTTTGAAGTATAGGCCAAAGGATAAAGCTCATAAGAGGGAGAGTCTTTTAAAAAGAGCATATGAAGAGCTTATTGTTGTTAAATATGGTCTCAACCATGTTACCTA
CCTCATTGAGCAGTTGGTTGTGATTGCGCATGATGTAGATCTGATCAAGTTAGTTGTTTGGCTCCGTGCTCTGTGCAGGAAGATGAAAATTCTATATTGCATTATTGTTC
ACAAAAAGATTGCATCCGTTTTGTGCTTGACAACCGTACAGAACAAAGATCAAATGGAGTTTAACAGGATCCTTGAAGCTATTAAGGCAAATTTCAATGACAAGTACGAT
CAGTACAAAAAGAAGTGGGGTGGCGAGATCATGGGTTCCAGCTTTAAGTTTTATTGGATTGACACTTTTTAG

mRNA sequence

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Protein sequence

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MLLKYRPKDKAHKRESLLKRAYEELIVVKYGLNHVTYLIEQLVVIAHDVDLIKLVVWLRALCRKMKILYCIIVHKKIASVLCLTTVQNKDQMEFNRILEAIKANFNDKYD
QYKKKWGGEIMGSSFKFYWIDTF

Tan0002849 (gene) of Snake gourd v1 genome