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Tan0002872 (gene) of Snake gourd v1 genome

Gene IDTan0002872
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionORF43m
Genome locationLG11:25444448..25444699
RNA-Seq ExpressionTan0002872
SyntenyTan0002872
Gene Ontology termsGO:0016740 - transferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ERM97427.1 hypothetical protein AMTR_s02909p00006680 [Amborella trichopoda]2.1e-1967.07Show/hide
Query:  MDRTWTVVGVDNSLRVPSSGIPGEEDQ----------------------EGKSMDRPHRLHLVGTTRSPQGRLWYPGVADRP
        MDRTWTVVGV  SLRVPSSGIPGEEDQ                      EGKSMDRPHRLH VGTTRSPQGRL +PGVADRP
Subjt:  MDRTWTVVGVDNSLRVPSSGIPGEEDQ----------------------EGKSMDRPHRLHLVGTTRSPQGRLWYPGVADRP

KAB8477470.1 hypothetical protein FH972_025336 [Carpinus fangiana]8.9e-1864.63Show/hide
Query:  MDRTWTVVGVDNSLRVPSSGIPGEEDQ----------------------EGKSMDRPHRLHLVGTTRSPQGRLWYPGVADRP
        MDRTWTVVGV  S R PSSGIPGEEDQ                      EGKSMDRPHRLH VGTTRSPQGRL +PGVADRP
Subjt:  MDRTWTVVGVDNSLRVPSSGIPGEEDQ----------------------EGKSMDRPHRLHLVGTTRSPQGRLWYPGVADRP

KAF4360023.1 hypothetical protein F8388_004530 [Cannabis sativa]5.2e-1862.2Show/hide
Query:  MDRTWTVVGVDNSLRVPSSGIPGEEDQ----------------------EGKSMDRPHRLHLVGTTRSPQGRLWYPGVADRP
        MDRTW +VGV +S+RVPSSGIPGEEDQ                      EGKSMDRPHRLH +GTTRSPQGRL +PGVADRP
Subjt:  MDRTWTVVGVDNSLRVPSSGIPGEEDQ----------------------EGKSMDRPHRLHLVGTTRSPQGRLWYPGVADRP

QHE65624.1 ORF43m [Nitraria roborowskii]5.6e-2068.29Show/hide
Query:  MDRTWTVVGVDNSLRVPSSGIPGEEDQ----------------------EGKSMDRPHRLHLVGTTRSPQGRLWYPGVADRP
        MDRTWTVVGV  SLRVPSSGIPGEEDQ                      EGKSMDRPHRLH VGTTRSPQGRL YPGVADRP
Subjt:  MDRTWTVVGVDNSLRVPSSGIPGEEDQ----------------------EGKSMDRPHRLHLVGTTRSPQGRLWYPGVADRP

YP_009758287.1 hypothetical protein [Rubus amabilis]8.9e-1864.63Show/hide
Query:  MDRTWTVVGVDNSLRVPSSGIPGEEDQEG----------------------KSMDRPHRLHLVGTTRSPQGRLWYPGVADRP
        MDRTWTVVGV  S RVPSSGIPGEEDQ G                      KSMDRPHRLH VGTTRSPQGRL +PGVADRP
Subjt:  MDRTWTVVGVDNSLRVPSSGIPGEEDQEG----------------------KSMDRPHRLHLVGTTRSPQGRLWYPGVADRP

TrEMBL top hitse value%identityAlignment
A0A6B9QF48 ORF43m2.7e-2068.29Show/hide
Query:  MDRTWTVVGVDNSLRVPSSGIPGEEDQ----------------------EGKSMDRPHRLHLVGTTRSPQGRLWYPGVADRP
        MDRTWTVVGV  SLRVPSSGIPGEEDQ                      EGKSMDRPHRLH VGTTRSPQGRL YPGVADRP
Subjt:  MDRTWTVVGVDNSLRVPSSGIPGEEDQ----------------------EGKSMDRPHRLHLVGTTRSPQGRLWYPGVADRP

A0A6B9QFK3 ORF43m2.7e-2068.29Show/hide
Query:  MDRTWTVVGVDNSLRVPSSGIPGEEDQ----------------------EGKSMDRPHRLHLVGTTRSPQGRLWYPGVADRP
        MDRTWTVVGV  SLRVPSSGIPGEEDQ                      EGKSMDRPHRLH VGTTRSPQGRL YPGVADRP
Subjt:  MDRTWTVVGVDNSLRVPSSGIPGEEDQ----------------------EGKSMDRPHRLHLVGTTRSPQGRLWYPGVADRP

A0A6B9QGL2 ORF43m2.7e-2068.29Show/hide
Query:  MDRTWTVVGVDNSLRVPSSGIPGEEDQ----------------------EGKSMDRPHRLHLVGTTRSPQGRLWYPGVADRP
        MDRTWTVVGV  SLRVPSSGIPGEEDQ                      EGKSMDRPHRLH VGTTRSPQGRL YPGVADRP
Subjt:  MDRTWTVVGVDNSLRVPSSGIPGEEDQ----------------------EGKSMDRPHRLHLVGTTRSPQGRLWYPGVADRP

A0A7J6ENP9 Uncharacterized protein2.5e-1862.2Show/hide
Query:  MDRTWTVVGVDNSLRVPSSGIPGEEDQ----------------------EGKSMDRPHRLHLVGTTRSPQGRLWYPGVADRP
        MDRTW +VGV +S+RVPSSGIPGEEDQ                      EGKSMDRPHRLH +GTTRSPQGRL +PGVADRP
Subjt:  MDRTWTVVGVDNSLRVPSSGIPGEEDQ----------------------EGKSMDRPHRLHLVGTTRSPQGRLWYPGVADRP

U5CKY2 Uncharacterized protein1.0e-1967.07Show/hide
Query:  MDRTWTVVGVDNSLRVPSSGIPGEEDQ----------------------EGKSMDRPHRLHLVGTTRSPQGRLWYPGVADRP
        MDRTWTVVGV  SLRVPSSGIPGEEDQ                      EGKSMDRPHRLH VGTTRSPQGRL +PGVADRP
Subjt:  MDRTWTVVGVDNSLRVPSSGIPGEEDQ----------------------EGKSMDRPHRLHLVGTTRSPQGRLWYPGVADRP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCGTACATGGACGGTAGTTGGAGTCGACAACTCTCTTAGGGTTCCCTCATCTGGGATCCCTGGGGAAGAGGATCAAGAAGGAAAATCCATGGACCGACCCCATCG
TCTCCACCTCGTAGGAACTACGAGATCACCCCAAGGACGCCTTTGGTATCCAGGGGTCGCGGACCGACCAAACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATCGTACATGGACGGTAGTTGGAGTCGACAACTCTCTTAGGGTTCCCTCATCTGGGATCCCTGGGGAAGAGGATCAAGAAGGAAAATCCATGGACCGACCCCATCG
TCTCCACCTCGTAGGAACTACGAGATCACCCCAAGGACGCCTTTGGTATCCAGGGGTCGCGGACCGACCAAACTAG
Protein sequenceShow/hide protein sequence
MDRTWTVVGVDNSLRVPSSGIPGEEDQEGKSMDRPHRLHLVGTTRSPQGRLWYPGVADRPN