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Tan0002888 (gene) of Snake gourd v1 genome

Gene IDTan0002888
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionprotein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1
Genome locationLG05:7698613..7701822
RNA-Seq ExpressionTan0002888
SyntenyTan0002888
Gene Ontology termsGO:0000741 - karyogamy (biological process)
InterPro domainsIPR033251 - Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial
IPR043459 - NFD6/NOXY2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7010763.1 Protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-3591.3Show/hide
Query:  MASIGARSVFRSFSGSARRAAAQIGSQARPSSSSPFRMATNKPLSHRNFRCAAEMSFCLESMMPFHSASSAALMTSMLSISRRSCGWLPEGA
        MASIGARSVFRSFSGSARRAAAQIGSQA+ SSS+PFRMAT KPLSHR FRCAAEMSFCLESMMPFHSASS+ALMTSMLS+SR SCGWLPEGA
Subjt:  MASIGARSVFRSFSGSARRAAAQIGSQARPSSSSPFRMATNKPLSHRNFRCAAEMSFCLESMMPFHSASSAALMTSMLSISRRSCGWLPEGA

KAG7026975.1 Protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]1.7e-3586.27Show/hide
Query:  MASIGARSVFRSFSGSARRAAAQIGSQARPSSSSPFRMATNKPLSHRNFRCAAEMSFCLESMMPFHSASSAALMTSMLSISRRSCGWLPEGALYLVLLIC
        MASIGARSVFRS SGSARRAAA IGSQAR SS SPFRMATNKPLSHR FRCAAEMSFCLES+MPFHSASSAALM SMLSISRRSCGWLPEGAL   L++ 
Subjt:  MASIGARSVFRSFSGSARRAAAQIGSQARPSSSSPFRMATNKPLSHRNFRCAAEMSFCLESMMPFHSASSAALMTSMLSISRRSCGWLPEGALYLVLLIC

Query:  YL
        +L
Subjt:  YL

XP_022971141.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 [Cucurbita maxima]3.7e-3592.31Show/hide
Query:  MASIGARSVFRSFSGSARRAAAQIGSQARPSSSSPFRMATNKPLSHRNFRCAAEMSFCLESMMPFHSASSAALMTSMLSISRRSCGWLPEG
        MASIGARSVFRSFSGSARRAAA IGSQAR SS SPFRMATNKPLSHR FRCAAEMSFCLES+MPFHSASSAA+M SMLSISRRSCGWLPEG
Subjt:  MASIGARSVFRSFSGSARRAAAQIGSQARPSSSSPFRMATNKPLSHRNFRCAAEMSFCLESMMPFHSASSAALMTSMLSISRRSCGWLPEG

XP_023512420.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 [Cucurbita pepo subsp. pepo]7.5e-3692.31Show/hide
Query:  MASIGARSVFRSFSGSARRAAAQIGSQARPSSSSPFRMATNKPLSHRNFRCAAEMSFCLESMMPFHSASSAALMTSMLSISRRSCGWLPEG
        MASIGARSVFRSFSGSARRAAAQIGSQA+ SSS+PFRMAT KPLSHRNFRCAAEMSFCLESMMPFHSASS+ALMTSMLS+SR SCGWLPEG
Subjt:  MASIGARSVFRSFSGSARRAAAQIGSQARPSSSSPFRMATNKPLSHRNFRCAAEMSFCLESMMPFHSASSAALMTSMLSISRRSCGWLPEG

XP_023512422.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X3 [Cucurbita pepo subsp. pepo]5.7e-3691.3Show/hide
Query:  MASIGARSVFRSFSGSARRAAAQIGSQARPSSSSPFRMATNKPLSHRNFRCAAEMSFCLESMMPFHSASSAALMTSMLSISRRSCGWLPEGA
        MASIGARSVFRSFSGSARRAAAQIGSQA+ SSS+PFRMAT KPLSHRNFRCAAEMSFCLESMMPFHSASS+ALMTSMLS+SR SCGWLPEG+
Subjt:  MASIGARSVFRSFSGSARRAAAQIGSQARPSSSSPFRMATNKPLSHRNFRCAAEMSFCLESMMPFHSASSAALMTSMLSISRRSCGWLPEGA

TrEMBL top hitse value%identityAlignment
A0A6J1G5E8 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X14.0e-3592.31Show/hide
Query:  MASIGARSVFRSFSGSARRAAAQIGSQARPSSSSPFRMATNKPLSHRNFRCAAEMSFCLESMMPFHSASSAALMTSMLSISRRSCGWLPEG
        MASIGARSVFRS SGSARRAAA IGSQAR SS SPFRMATNKPLSHR FRCAAEMSFCLES+MPFHSASSAALM SMLSISRRSCGWLPEG
Subjt:  MASIGARSVFRSFSGSARRAAAQIGSQARPSSSSPFRMATNKPLSHRNFRCAAEMSFCLESMMPFHSASSAALMTSMLSISRRSCGWLPEG

A0A6J1I155 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X21.8e-3592.31Show/hide
Query:  MASIGARSVFRSFSGSARRAAAQIGSQARPSSSSPFRMATNKPLSHRNFRCAAEMSFCLESMMPFHSASSAALMTSMLSISRRSCGWLPEG
        MASIGARSVFRSFSGSARRAAA IGSQAR SS SPFRMATNKPLSHR FRCAAEMSFCLES+MPFHSASSAA+M SMLSISRRSCGWLPEG
Subjt:  MASIGARSVFRSFSGSARRAAAQIGSQARPSSSSPFRMATNKPLSHRNFRCAAEMSFCLESMMPFHSASSAALMTSMLSISRRSCGWLPEG

A0A6J1I2H5 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X11.8e-3592.31Show/hide
Query:  MASIGARSVFRSFSGSARRAAAQIGSQARPSSSSPFRMATNKPLSHRNFRCAAEMSFCLESMMPFHSASSAALMTSMLSISRRSCGWLPEG
        MASIGARSVFRSFSGSARRAAA IGSQAR SS SPFRMATNKPLSHR FRCAAEMSFCLES+MPFHSASSAA+M SMLSISRRSCGWLPEG
Subjt:  MASIGARSVFRSFSGSARRAAAQIGSQARPSSSSPFRMATNKPLSHRNFRCAAEMSFCLESMMPFHSASSAALMTSMLSISRRSCGWLPEG

A0A6J1J7G1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X13.1e-3591.21Show/hide
Query:  MASIGARSVFRSFSGSARRAAAQIGSQARPSSSSPFRMATNKPLSHRNFRCAAEMSFCLESMMPFHSASSAALMTSMLSISRRSCGWLPEG
        MASIGARSVFRSFSGSARRAAAQIGSQA+ SSS+PFRMAT KPLSHR FRCAAEMSFCLESMMPFHSASS+ALMTSMLS+SR SCGWLPEG
Subjt:  MASIGARSVFRSFSGSARRAAAQIGSQARPSSSSPFRMATNKPLSHRNFRCAAEMSFCLESMMPFHSASSAALMTSMLSISRRSCGWLPEG

A0A6J1JFZ5 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X32.3e-3590.22Show/hide
Query:  MASIGARSVFRSFSGSARRAAAQIGSQARPSSSSPFRMATNKPLSHRNFRCAAEMSFCLESMMPFHSASSAALMTSMLSISRRSCGWLPEGA
        MASIGARSVFRSFSGSARRAAAQIGSQA+ SSS+PFRMAT KPLSHR FRCAAEMSFCLESMMPFHSASS+ALMTSMLS+SR SCGWLPEG+
Subjt:  MASIGARSVFRSFSGSARRAAAQIGSQARPSSSSPFRMATNKPLSHRNFRCAAEMSFCLESMMPFHSASSAALMTSMLSISRRSCGWLPEGA

SwissProt top hitse value%identityAlignment
Q93ZJ3 Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial5.2e-0844.32Show/hide
Query:  GARSVFRSFSGSARRAAAQIGSQARPSSSSP--FRMATNKPLSHRNFRCAAEMSFCLESMMPFHSASSAALMTSMLSISRRSCGWLPE
        GARS+ R  + S+R AAA  G  A  + S+P  FR    +       R   E+SFC+ES++P+HSA+++ALMTS LSIS ++ GWL +
Subjt:  GARSVFRSFSGSARRAAAQIGSQARPSSSSP--FRMATNKPLSHRNFRCAAEMSFCLESMMPFHSASSAALMTSMLSISRRSCGWLPE

Arabidopsis top hitse value%identityAlignment
AT1G28395.1 unknown protein1.0e-1144.94Show/hide
Query:  ARSVFRSFSGSARRAAAQIGSQARPSSSS---PFRMATNKPLSHRNFRCAAEMSFCLESMMPFHSASSAALMTSMLSISRRSCGWLPEG
        ARSVFRS +  A   A +  +  +P  SS    FRM    PL++R FR   E+S C+E+M+P+H+A+++AL+ SMLS+SRR  GW+ +G
Subjt:  ARSVFRSFSGSARRAAAQIGSQARPSSSS---PFRMATNKPLSHRNFRCAAEMSFCLESMMPFHSASSAALMTSMLSISRRSCGWLPEG

AT1G28395.2 unknown protein1.0e-1144.94Show/hide
Query:  ARSVFRSFSGSARRAAAQIGSQARPSSSS---PFRMATNKPLSHRNFRCAAEMSFCLESMMPFHSASSAALMTSMLSISRRSCGWLPEG
        ARSVFRS +  A   A +  +  +P  SS    FRM    PL++R FR   E+S C+E+M+P+H+A+++AL+ SMLS+SRR  GW+ +G
Subjt:  ARSVFRSFSGSARRAAAQIGSQARPSSSS---PFRMATNKPLSHRNFRCAAEMSFCLESMMPFHSASSAALMTSMLSISRRSCGWLPEG

AT1G28395.3 unknown protein1.0e-1144.94Show/hide
Query:  ARSVFRSFSGSARRAAAQIGSQARPSSSS---PFRMATNKPLSHRNFRCAAEMSFCLESMMPFHSASSAALMTSMLSISRRSCGWLPEG
        ARSVFRS +  A   A +  +  +P  SS    FRM    PL++R FR   E+S C+E+M+P+H+A+++AL+ SMLS+SRR  GW+ +G
Subjt:  ARSVFRSFSGSARRAAAQIGSQARPSSSS---PFRMATNKPLSHRNFRCAAEMSFCLESMMPFHSASSAALMTSMLSISRRSCGWLPEG

AT1G28395.4 unknown protein6.8e-1145.35Show/hide
Query:  ARSVFRSFSGSARRAAAQIGSQARPSSSS---PFRMATNKPLSHRNFRCAAEMSFCLESMMPFHSASSAALMTSMLSISRRSCGWL
        ARSVFRS +  A   A +  +  +P  SS    FRM    PL++R FR   E+S C+E+M+P+H+A+++AL+ SMLS+SRR  GW+
Subjt:  ARSVFRSFSGSARRAAAQIGSQARPSSSS---PFRMATNKPLSHRNFRCAAEMSFCLESMMPFHSASSAALMTSMLSISRRSCGWL

AT2G33847.2 unknown protein5.2e-1146.51Show/hide
Query:  ARSVFRSFSGSARRAAAQIGSQARPSSSSPFRMATNKPLSHRNFRCAAEMSFCLESMMPFHSASSAALMTSMLSISRRSCGWLPEG
        ARSVFRS  G A  AA +       S+ S F++    PLSHR FR   E+S C+E+M+P+H+A+++AL+ SMLS+S RS  W  +G
Subjt:  ARSVFRSFSGSARRAAAQIGSQARPSSSSPFRMATNKPLSHRNFRCAAEMSFCLESMMPFHSASSAALMTSMLSISRRSCGWLPEG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTCAATTGGCGCTAGGTCTGTTTTTCGGTCATTTTCCGGTTCTGCACGCCGTGCTGCTGCTCAGATCGGCTCTCAAGCCCGGCCGTCGTCAAGCTCTCCCTTTCG
AATGGCAACTAACAAGCCCCTCTCTCATCGAAATTTCAGGTGTGCGGCTGAGATGAGCTTCTGTTTGGAATCGATGATGCCATTTCACTCTGCGTCGTCGGCAGCTTTGA
TGACCTCGATGCTCTCTATCTCACGCCGGAGCTGCGGTTGGCTTCCCGAAGGTGCCTTGTATTTGGTACTATTGATTTGTTATCTTCCCAATTCCACTACATGGAGATGG
GGGTTGCAAATTCAGCAATATATTACTCTTACCATCAAGTACCATGAAAAGGAGTTTGAAGGCGGTGATATTCAATCAGCGTGTCTAGCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCTCAATTGGCGCTAGGTCTGTTTTTCGGTCATTTTCCGGTTCTGCACGCCGTGCTGCTGCTCAGATCGGCTCTCAAGCCCGGCCGTCGTCAAGCTCTCCCTTTCG
AATGGCAACTAACAAGCCCCTCTCTCATCGAAATTTCAGGTGTGCGGCTGAGATGAGCTTCTGTTTGGAATCGATGATGCCATTTCACTCTGCGTCGTCGGCAGCTTTGA
TGACCTCGATGCTCTCTATCTCACGCCGGAGCTGCGGTTGGCTTCCCGAAGGTGCCTTGTATTTGGTACTATTGATTTGTTATCTTCCCAATTCCACTACATGGAGATGG
GGGTTGCAAATTCAGCAATATATTACTCTTACCATCAAGTACCATGAAAAGGAGTTTGAAGGCGGTGATATTCAATCAGCGTGTCTAGCATGA
Protein sequenceShow/hide protein sequence
MASIGARSVFRSFSGSARRAAAQIGSQARPSSSSPFRMATNKPLSHRNFRCAAEMSFCLESMMPFHSASSAALMTSMLSISRRSCGWLPEGALYLVLLICYLPNSTTWRW
GLQIQQYITLTIKYHEKEFEGGDIQSACLA