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Tan0002898 (gene) of Snake gourd v1 genome

Gene IDTan0002898
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG09:60865247..60865516
RNA-Seq ExpressionTan0002898
SyntenyTan0002898
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022158565.1 uncharacterized protein LOC111025018 [Momordica charantia]2.9e-0948.84Show/hide
Query:  DVGEEGLPETPTSRRNTYDMSSRCTGSKRKRSCFQTEMIDVVRTTMNMQTNHMQRLLSWQKEKYELEAARRKEVVDLLYQIEGLRA
        D  EE LP TPTS+     + +   GSKRKRS + +EM+DVVRT M MQT H++++ +W  +K E + ARRK V D L QI  L A
Subjt:  DVGEEGLPETPTSRRNTYDMSSRCTGSKRKRSCFQTEMIDVVRTTMNMQTNHMQRLLSWQKEKYELEAARRKEVVDLLYQIEGLRA

XP_038877407.1 uncharacterized protein LOC120069696 [Benincasa hispida]8.1e-1255.56Show/hide
Query:  EEGLPETPTSRRNTYDMSSRCTGSKRKRSCFQTEMIDVVRTTMNMQTNHMQRLLSWQKEKYELEAARRKEVVDLLYQIEGL
        +E   E  T R +    SSR  GSKRKRS FQ EMID++R+T+ M + HM RL SWQK+KYELE  R+KEVV+ +Y I+GL
Subjt:  EEGLPETPTSRRNTYDMSSRCTGSKRKRSCFQTEMIDVVRTTMNMQTNHMQRLLSWQKEKYELEAARRKEVVDLLYQIEGL

XP_038887234.1 uncharacterized protein LOC120077425 [Benincasa hispida]9.9e-1054.32Show/hide
Query:  EEGLPETPTSRRNTYDMSSRCTGSKRKRSCFQTEMIDVVRTTMNMQTNHMQRLLSWQKEKYELEAARRKEVVDLLYQIEGL
        +E   E  T R +    SSR  GSKRKRS FQ EMID+V++T+ MQ+ HM RL SWQ EKYELE    KEVV+ +Y I+ L
Subjt:  EEGLPETPTSRRNTYDMSSRCTGSKRKRSCFQTEMIDVVRTTMNMQTNHMQRLLSWQKEKYELEAARRKEVVDLLYQIEGL

XP_038896380.1 uncharacterized protein LOC120084641 [Benincasa hispida]3.3e-1358.02Show/hide
Query:  EEGLPETPTSRRNTYDMSSRCTGSKRKRSCFQTEMIDVVRTTMNMQTNHMQRLLSWQKEKYELEAARRKEVVDLLYQIEGL
        +E   E  T R +    SSR  GSKRKR  FQ EMID++R+T+ MQ+ HM RL SWQKEKYELE  RRKEVV+ +Y I+GL
Subjt:  EEGLPETPTSRRNTYDMSSRCTGSKRKRSCFQTEMIDVVRTTMNMQTNHMQRLLSWQKEKYELEAARRKEVVDLLYQIEGL

XP_038899910.1 uncharacterized protein LOC120087100 [Benincasa hispida]9.0e-1164.41Show/hide
Query:  GSKRKRSCFQTEMIDVVRTTMNMQTNHMQRLLSWQKEKYELEAARRKEVVDLLYQIEGL
        GSKRKR  FQ EMID++R+T+ MQ+ HM RL SWQKEKYELE    KEVV+ +Y I+GL
Subjt:  GSKRKRSCFQTEMIDVVRTTMNMQTNHMQRLLSWQKEKYELEAARRKEVVDLLYQIEGL

TrEMBL top hitse value%identityAlignment
A0A6J1DW73 uncharacterized protein LOC1110250181.4e-0948.84Show/hide
Query:  DVGEEGLPETPTSRRNTYDMSSRCTGSKRKRSCFQTEMIDVVRTTMNMQTNHMQRLLSWQKEKYELEAARRKEVVDLLYQIEGLRA
        D  EE LP TPTS+     + +   GSKRKRS + +EM+DVVRT M MQT H++++ +W  +K E + ARRK V D L QI  L A
Subjt:  DVGEEGLPETPTSRRNTYDMSSRCTGSKRKRSCFQTEMIDVVRTTMNMQTNHMQRLLSWQKEKYELEAARRKEVVDLLYQIEGLRA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACTGTGACGTAGGGGAAGAGGGCTTGCCAGAGACTCCTACTAGCAGGCGTAATACATATGACATGTCTTCTAGATGTACTGGCAGCAAAAGGAAAAGATCATGCTT
CCAAACTGAAATGATTGATGTTGTGCGGACAACAATGAACATGCAAACAAATCACATGCAAAGGCTTCTATCATGGCAGAAGGAAAAATATGAGTTGGAGGCTGCACGAC
GGAAGGAAGTGGTCGACCTTTTGTACCAAATAGAAGGGCTCCGAGCATGA
mRNA sequenceShow/hide mRNA sequence
ATGCACTGTGACGTAGGGGAAGAGGGCTTGCCAGAGACTCCTACTAGCAGGCGTAATACATATGACATGTCTTCTAGATGTACTGGCAGCAAAAGGAAAAGATCATGCTT
CCAAACTGAAATGATTGATGTTGTGCGGACAACAATGAACATGCAAACAAATCACATGCAAAGGCTTCTATCATGGCAGAAGGAAAAATATGAGTTGGAGGCTGCACGAC
GGAAGGAAGTGGTCGACCTTTTGTACCAAATAGAAGGGCTCCGAGCATGA
Protein sequenceShow/hide protein sequence
MHCDVGEEGLPETPTSRRNTYDMSSRCTGSKRKRSCFQTEMIDVVRTTMNMQTNHMQRLLSWQKEKYELEAARRKEVVDLLYQIEGLRA