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Tan0002957 (gene) of Snake gourd v1 genome

Gene IDTan0002957
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG05:567754..568191
RNA-Seq ExpressionTan0002957
SyntenyTan0002957
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040748.1 hypothetical protein E6C27_scaffold703G00110 [Cucumis melo var. makuwa]4.2e-4267.55Show/hide
Query:  MSLVDPSAGRALVWIVTCFLFFSILSGGGCLLMYMILPETETTAWLPAAGLSLVCLPWFFWFLTFFYRIISRACGFRVSLGSIAS-DQPPIPPNPNLNNN
        MSLV+PSAGRA +WIVTCFLFFSI+SGGGCLLMYMILPE+E+T WLP  GLSLVCLPWFFW LTFFYR+ISRACG+RVSLG+ A      +  N N NNN
Subjt:  MSLVDPSAGRALVWIVTCFLFFSILSGGGCLLMYMILPETETTAWLPAAGLSLVCLPWFFWFLTFFYRIISRACGFRVSLGSIAS-DQPPIPPNPNLNNN

Query:  NNASAQSPTHHDPDHHDHDH---DQRRNSSSS--SIASRESEMPLAITMVS
        N +SA+SP     +  + D+   DQR+++SSS  SI SRESEMPLAITM S
Subjt:  NNASAQSPTHHDPDHHDHDH---DQRRNSSSS--SIASRESEMPLAITMVS

KAE8651991.1 hypothetical protein Csa_016945 [Cucumis sativus]6.1e-4168.03Show/hide
Query:  MSLVDPSAGRALVWIVTCFLFFSILSGGGCLLMYMILPETETTAWLPAAGLSLVCLPWFFWFLTFFYRIISRACGFRVSLGSIASDQPPIPPNPNLNNNN
        MSLV+PSAGRA +WIVTCFLFFSILSGGGCLLMYMILPETETTAWLP  GLSLVCLPWFFW LTFFYR++SRACGFRVSLG  A D   +    N +NNN
Subjt:  MSLVDPSAGRALVWIVTCFLFFSILSGGGCLLMYMILPETETTAWLPAAGLSLVCLPWFFWFLTFFYRIISRACGFRVSLGSIASDQPPIPPNPNLNNNN

Query:  NASAQSPTHHDPDHHDHDHDQRRNSSSS--SIASRESEMPLAITMVS
                           DQR ++SSS  SI SRESEMPLAITM S
Subjt:  NASAQSPTHHDPDHHDHDHDQRRNSSSS--SIASRESEMPLAITMVS

XP_008460874.1 PREDICTED: putative uncharacterized protein DDB_G0283431 [Cucumis melo]9.4e-4266.01Show/hide
Query:  MSLVDPSAGRALVWIVTCFLFFSILSGGGCLLMYMILPETETTAWLPAAGLSLVCLPWFFWFLTFFYRIISRACGFRVSLGS---IASDQPPIPPNPNLN
        MSLV+PSAGRA +WIVTCFLFFSI+SGGGCLLMYMILPE+E+T WLP  GLSLVCLPWFFW LTFFYR+ISRACG+RVSLG+   + ++   +  N N N
Subjt:  MSLVDPSAGRALVWIVTCFLFFSILSGGGCLLMYMILPETETTAWLPAAGLSLVCLPWFFWFLTFFYRIISRACGFRVSLGS---IASDQPPIPPNPNLN

Query:  NNNNASAQSPTHHDPDHHDHDH---DQRRNSSSS--SIASRESEMPLAITMVS
        NNN +SA+SP     +  + D+   DQR+++SSS  SI SRESEMPLAITM S
Subjt:  NNNNASAQSPTHHDPDHHDHDH---DQRRNSSSS--SIASRESEMPLAITMVS

XP_011649431.1 putative uncharacterized protein DDB_G0284715 [Cucumis sativus]9.1e-4570.86Show/hide
Query:  MSLVDPSAGRALVWIVTCFLFFSILSGGGCLLMYMILPETETTAWLPAAGLSLVCLPWFFWFLTFFYRIISRACGFRVSLGSIASDQPPIPPNPNLNNNN
        MSLV+PSAGRA +WIVTCFLFFSILSGGGCLLMYMILPETETTAWLP  GLSLVCLPWFFW LTFFYR++SRACGFRVSLG I +D      N N NNNN
Subjt:  MSLVDPSAGRALVWIVTCFLFFSILSGGGCLLMYMILPETETTAWLPAAGLSLVCLPWFFWFLTFFYRIISRACGFRVSLGSIASDQPPIPPNPNLNNNN

Query:  NASAQSPTHHDPDHHDHDH----DQRRNSSSS--SIASRESEMPLAITMVS
        NAS+      D    D++     DQR ++SSS  SI SRESEMPLAITM S
Subjt:  NASAQSPTHHDPDHHDHDH----DQRRNSSSS--SIASRESEMPLAITMVS

XP_038900833.1 uncharacterized protein LOC120087896 [Benincasa hispida]2.8e-4674.34Show/hide
Query:  MSLVDPSAGRALVWIVTCFLFFSILSGGGCLLMYMILPETETTAWLPAAGLSLVCLPWFFWFLTFFYRIISRACGFRVSLGSIASDQPPIPPNP-NLNNN
        MSLV+PSAGRA +WIVTCFLFFSI+SGGGCLLMYMILPETETTAWLP AGLSLVCLPWFFW LTFFYR+ISRACGFRVS+G I  D      N  N NNN
Subjt:  MSLVDPSAGRALVWIVTCFLFFSILSGGGCLLMYMILPETETTAWLPAAGLSLVCLPWFFWFLTFFYRIISRACGFRVSLGSIASDQPPIPPNP-NLNNN

Query:  NNASAQSPTHHDPDHHDHDH----DQRRNSSSS--SIASRESEMPLAITMVS
        NNASA+SP H   D  D +     DQRR++SSS  SIASRESEMPLAITM S
Subjt:  NNASAQSPTHHDPDHHDHDH----DQRRNSSSS--SIASRESEMPLAITMVS

TrEMBL top hitse value%identityAlignment
A0A0A0LJX6 Uncharacterized protein4.4e-4570.86Show/hide
Query:  MSLVDPSAGRALVWIVTCFLFFSILSGGGCLLMYMILPETETTAWLPAAGLSLVCLPWFFWFLTFFYRIISRACGFRVSLGSIASDQPPIPPNPNLNNNN
        MSLV+PSAGRA +WIVTCFLFFSILSGGGCLLMYMILPETETTAWLP  GLSLVCLPWFFW LTFFYR++SRACGFRVSLG I +D      N N NNNN
Subjt:  MSLVDPSAGRALVWIVTCFLFFSILSGGGCLLMYMILPETETTAWLPAAGLSLVCLPWFFWFLTFFYRIISRACGFRVSLGSIASDQPPIPPNPNLNNNN

Query:  NASAQSPTHHDPDHHDHDH----DQRRNSSSS--SIASRESEMPLAITMVS
        NAS+      D    D++     DQR ++SSS  SI SRESEMPLAITM S
Subjt:  NASAQSPTHHDPDHHDHDH----DQRRNSSSS--SIASRESEMPLAITMVS

A0A1S3CDW9 Uncharacterized protein4.6e-4266.01Show/hide
Query:  MSLVDPSAGRALVWIVTCFLFFSILSGGGCLLMYMILPETETTAWLPAAGLSLVCLPWFFWFLTFFYRIISRACGFRVSLGS---IASDQPPIPPNPNLN
        MSLV+PSAGRA +WIVTCFLFFSI+SGGGCLLMYMILPE+E+T WLP  GLSLVCLPWFFW LTFFYR+ISRACG+RVSLG+   + ++   +  N N N
Subjt:  MSLVDPSAGRALVWIVTCFLFFSILSGGGCLLMYMILPETETTAWLPAAGLSLVCLPWFFWFLTFFYRIISRACGFRVSLGS---IASDQPPIPPNPNLN

Query:  NNNNASAQSPTHHDPDHHDHDH---DQRRNSSSS--SIASRESEMPLAITMVS
        NNN +SA+SP     +  + D+   DQR+++SSS  SI SRESEMPLAITM S
Subjt:  NNNNASAQSPTHHDPDHHDHDH---DQRRNSSSS--SIASRESEMPLAITMVS

A0A5A7TCV0 Uncharacterized protein2.0e-4267.55Show/hide
Query:  MSLVDPSAGRALVWIVTCFLFFSILSGGGCLLMYMILPETETTAWLPAAGLSLVCLPWFFWFLTFFYRIISRACGFRVSLGSIAS-DQPPIPPNPNLNNN
        MSLV+PSAGRA +WIVTCFLFFSI+SGGGCLLMYMILPE+E+T WLP  GLSLVCLPWFFW LTFFYR+ISRACG+RVSLG+ A      +  N N NNN
Subjt:  MSLVDPSAGRALVWIVTCFLFFSILSGGGCLLMYMILPETETTAWLPAAGLSLVCLPWFFWFLTFFYRIISRACGFRVSLGSIAS-DQPPIPPNPNLNNN

Query:  NNASAQSPTHHDPDHHDHDH---DQRRNSSSS--SIASRESEMPLAITMVS
        N +SA+SP     +  + D+   DQR+++SSS  SI SRESEMPLAITM S
Subjt:  NNASAQSPTHHDPDHHDHDH---DQRRNSSSS--SIASRESEMPLAITMVS

A0A6J1D6I2 uncharacterized protein LOC1110175039.5e-4062.82Show/hide
Query:  MSLVDPSAGRALVWIVTCFLFFSILSGGGCLLMYMILPETETTAWLPAAGLSLVCLPWFFWFLTFFYRIISRACGFRVSLG--------SIASDQPPIPP
        MSLVDPS GRA +WI+T FLFF ILSGGGCL+MYMILPETETTAWLP  GLSLVCLPWFFW LTFFYR+ISRACGFRVSLG         +A+     P 
Subjt:  MSLVDPSAGRALVWIVTCFLFFSILSGGGCLLMYMILPETETTAWLPAAGLSLVCLPWFFWFLTFFYRIISRACGFRVSLG--------SIASDQPPIPP

Query:  NPNLNNNNNASAQSPTHHDPDHHDHDHDQRRNSSSS---SIASRESEMPLAITMVS
         P ++N+           D D H    DQ+RNS+SS   S  SRESEMPLAITM S
Subjt:  NPNLNNNNNASAQSPTHHDPDHHDHDHDQRRNSSSS---SIASRESEMPLAITMVS

A0A6J1G7P7 uncharacterized protein LOC1114515882.1e-3965.75Show/hide
Query:  MSLVDPSAGRALVWIVTCFLFFSILSGGGCLLMYMILPETETTAWLPAAGLSLVCLPWFFWFLTFFYRIISRACGFRVSLGSIASDQPPIPPNPNLNNN-
        MSLVDPS GR L+WIVT  LF S+LSGGGCLLMY+ LPETE TAWLP AGLSLVCLPWFFWFLTF YRIISRACGFRVSLG + ++      N N +NN 
Subjt:  MSLVDPSAGRALVWIVTCFLFFSILSGGGCLLMYMILPETETTAWLPAAGLSLVCLPWFFWFLTFFYRIISRACGFRVSLGSIASDQPPIPPNPNLNNN-

Query:  NNASAQSPTHHDPDHHDHDHDQRRNSSSSSIASRESEMPLAITMVS
        +N S QS      +  D +  Q  +SS+SS ASRESE PLAITM S
Subjt:  NNASAQSPTHHDPDHHDHDHDQRRNSSSSSIASRESEMPLAITMVS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G30770.1 Putative membrane lipoprotein4.0e-2242.44Show/hide
Query:  MSLVDPSAGRALVWIVTCFLFFSILSGGGCLLMYMILPETETTAWLPAAGLSLVCLPWFFWFLTFFYRIISRACGFRVSLGSIASDQPPIPPNPNLNNNN
        M + DP AG+A + ++T FLF SI  GGGCL+ Y ILP      WL   G+  VCLPWFFW LTF YRI+SR  GFR+ +GS               NNN
Subjt:  MSLVDPSAGRALVWIVTCFLFFSILSGGGCLLMYMILPETETTAWLPAAGLSLVCLPWFFWFLTFFYRIISRACGFRVSLGSIASDQPPIPPNPNLNNNN

Query:  NA--------------SAQSPTHHDPDHHDHDHDQ-------------RRNSSSSSIASRESEMPLAITMVS
        NA              S +SP   DP+   H   Q                SS+S+IAS ESEMPLAI+M S
Subjt:  NA--------------SAQSPTHHDPDHHDHDHDQ-------------RRNSSSSSIASRESEMPLAITMVS

AT5G17590.1 Putative membrane lipoprotein2.9e-0427.52Show/hide
Query:  VDPSAGRALVWIVTCFLFFSILSGGGCLLMYMILPETETTAWLPAAGLSLVCLPWFFWFLTFFYRIISRACGFRVSLGSIASDQPPIPPNPNLNNNNNAS
        +D   G   ++I+T      IL GG  L +Y++   ++       AG+  V +PW FWFL + Y  + + C   VS  +I + +     +P   + N A 
Subjt:  VDPSAGRALVWIVTCFLFFSILSGGGCLLMYMILPETETTAWLPAAGLSLVCLPWFFWFLTFFYRIISRACGFRVSLGSIASDQPPIPPNPNLNNNNNAS

Query:  AQSPTHHDP
            T  DP
Subjt:  AQSPTHHDP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTTGGTGGATCCATCAGCTGGACGTGCATTGGTATGGATCGTGACTTGCTTTCTCTTCTTCTCTATTCTGAGCGGTGGCGGATGTCTTTTGATGTATATGATCCT
CCCTGAGACCGAAACCACCGCCTGGTTGCCCGCCGCCGGCTTGTCCTTGGTCTGCCTCCCTTGGTTCTTCTGGTTCTTAACTTTCTTCTATAGAATCATCTCACGTGCAT
GTGGTTTTAGAGTCTCTCTTGGCAGCATAGCCTCCGACCAACCTCCAATTCCTCCAAATCCCAATCTTAATAATAATAATAATGCATCTGCCCAATCCCCTACACACCAT
GACCCAGATCACCACGACCACGACCACGATCAAAGGCGGAACAGTTCATCCAGCTCCATAGCGTCTCGTGAAAGTGAAATGCCCTTAGCCATAACAATGGTGTCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCTTTGGTGGATCCATCAGCTGGACGTGCATTGGTATGGATCGTGACTTGCTTTCTCTTCTTCTCTATTCTGAGCGGTGGCGGATGTCTTTTGATGTATATGATCCT
CCCTGAGACCGAAACCACCGCCTGGTTGCCCGCCGCCGGCTTGTCCTTGGTCTGCCTCCCTTGGTTCTTCTGGTTCTTAACTTTCTTCTATAGAATCATCTCACGTGCAT
GTGGTTTTAGAGTCTCTCTTGGCAGCATAGCCTCCGACCAACCTCCAATTCCTCCAAATCCCAATCTTAATAATAATAATAATGCATCTGCCCAATCCCCTACACACCAT
GACCCAGATCACCACGACCACGACCACGATCAAAGGCGGAACAGTTCATCCAGCTCCATAGCGTCTCGTGAAAGTGAAATGCCCTTAGCCATAACAATGGTGTCGTAG
Protein sequenceShow/hide protein sequence
MSLVDPSAGRALVWIVTCFLFFSILSGGGCLLMYMILPETETTAWLPAAGLSLVCLPWFFWFLTFFYRIISRACGFRVSLGSIASDQPPIPPNPNLNNNNNASAQSPTHH
DPDHHDHDHDQRRNSSSSSIASRESEMPLAITMVS