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Tan0002997 (gene) of Snake gourd v1 genome

Gene IDTan0002997
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptioncytochrome c oxidase-assembly factor COX23, mitochondrial
Genome locationLG10:3859386..3862828
RNA-Seq ExpressionTan0002997
SyntenyTan0002997
Gene Ontology termsNA
InterPro domainsIPR009069 - Cysteine alpha-hairpin motif superfamily
IPR010625 - CHCH


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004133972.1 cytochrome c oxidase-assembly factor COX23, mitochondrial [Cucumis sativus]2.3e-2893.15Show/hide
Query:  MASTSRDPAPPYPSAARISDSPCYPQYSASLKCLEEHSSEKSKCQGHFDVYKECKKKEREARLERNSKRSFFS
        MASTSRDP PPYPSAARISDSPCYPQYSASLKCLE HSSEKSKCQ HFDVYKECKKKEREARLERN  RSFFS
Subjt:  MASTSRDPAPPYPSAARISDSPCYPQYSASLKCLEEHSSEKSKCQGHFDVYKECKKKEREARLERNSKRSFFS
XP_022924627.1 cytochrome c oxidase-assembly factor COX23, mitochondrial [Cucurbita moschata]3.5e-2993.15Show/hide
Query:  MASTSRDPAPPYPSAARISDSPCYPQYSASLKCLEEHSSEKSKCQGHFDVYKECKKKEREARLERNSKRSFFS
        MASTSRDP+PPYPSAARISDSPC+PQYSASLKCLEEHSSE+SKCQ HFDVYKECKKKEREARLERN KRSFFS
Subjt:  MASTSRDPAPPYPSAARISDSPCYPQYSASLKCLEEHSSEKSKCQGHFDVYKECKKKEREARLERNSKRSFFS
XP_022980456.1 cytochrome c oxidase-assembly factor COX23, mitochondrial [Cucurbita maxima]8.7e-2891.78Show/hide
Query:  MASTSRDPAPPYPSAARISDSPCYPQYSASLKCLEEHSSEKSKCQGHFDVYKECKKKEREARLERNSKRSFFS
        MASTSRDP PPYPSAARISDSPC+ QYSASLKCLEEHSSE+SKCQ HFDVYKECKKKEREARLERN KRSFFS
Subjt:  MASTSRDPAPPYPSAARISDSPCYPQYSASLKCLEEHSSEKSKCQGHFDVYKECKKKEREARLERNSKRSFFS
XP_023527834.1 cytochrome c oxidase-assembly factor COX23, mitochondrial [Cucurbita pepo subsp. pepo]5.1e-2891.78Show/hide
Query:  MASTSRDPAPPYPSAARISDSPCYPQYSASLKCLEEHSSEKSKCQGHFDVYKECKKKEREARLERNSKRSFFS
        MASTSRDP+PPYPSAARISDSPC+ QYSASLKCLEEHSSE+SKCQ HFDVYKECKKKEREARLERN KRSFFS
Subjt:  MASTSRDPAPPYPSAARISDSPCYPQYSASLKCLEEHSSEKSKCQGHFDVYKECKKKEREARLERNSKRSFFS
XP_038906947.1 cytochrome c oxidase-assembly factor COX23, mitochondrial [Benincasa hispida]6.6e-2891.78Show/hide
Query:  MASTSRDPAPPYPSAARISDSPCYPQYSASLKCLEEHSSEKSKCQGHFDVYKECKKKEREARLERNSKRSFFS
        MASTSRDPAPPY SAARISDSPCYPQYSASLKCLEEH+SEKSKC+ HFDVYKECKKKEREARLERN  RSFFS
Subjt:  MASTSRDPAPPYPSAARISDSPCYPQYSASLKCLEEHSSEKSKCQGHFDVYKECKKKEREARLERNSKRSFFS
TrEMBL top hitse value%identityAlignment
A0A0A0L4K5 CHCH domain-containing protein1.1e-2893.15Show/hide
Query:  MASTSRDPAPPYPSAARISDSPCYPQYSASLKCLEEHSSEKSKCQGHFDVYKECKKKEREARLERNSKRSFFS
        MASTSRDP PPYPSAARISDSPCYPQYSASLKCLE HSSEKSKCQ HFDVYKECKKKEREARLERN  RSFFS
Subjt:  MASTSRDPAPPYPSAARISDSPCYPQYSASLKCLEEHSSEKSKCQGHFDVYKECKKKEREARLERNSKRSFFS
A0A5A7U004 Cytochrome c oxidase-assembly factor COX232.1e-2791.78Show/hide
Query:  MASTSRDPAPPYPSAARISDSPCYPQYSASLKCLEEHSSEKSKCQGHFDVYKECKKKEREARLERNSKRSFFS
        MASTSRDPAPPY SAARISDSPCYPQYSASLKCLE +SSEKSKCQ HFDVYKECKKKEREARLERN  RSFFS
Subjt:  MASTSRDPAPPYPSAARISDSPCYPQYSASLKCLEEHSSEKSKCQGHFDVYKECKKKEREARLERNSKRSFFS
A0A6J1D157 cytochrome c oxidase-assembly factor COX23, mitochondrial5.5e-2891.78Show/hide
Query:  MASTSRDPAPPYPSAARISDSPCYPQYSASLKCLEEHSSEKSKCQGHFDVYKECKKKEREARLERNSKRSFFS
        MAST+RD APPY SAARISDSPCYPQYSASLKCLEEHSSEK+KCQ HFDVYKECKKKEREARLERN KRSFFS
Subjt:  MASTSRDPAPPYPSAARISDSPCYPQYSASLKCLEEHSSEKSKCQGHFDVYKECKKKEREARLERNSKRSFFS
A0A6J1E9H8 cytochrome c oxidase-assembly factor COX23, mitochondrial1.7e-2993.15Show/hide
Query:  MASTSRDPAPPYPSAARISDSPCYPQYSASLKCLEEHSSEKSKCQGHFDVYKECKKKEREARLERNSKRSFFS
        MASTSRDP+PPYPSAARISDSPC+PQYSASLKCLEEHSSE+SKCQ HFDVYKECKKKEREARLERN KRSFFS
Subjt:  MASTSRDPAPPYPSAARISDSPCYPQYSASLKCLEEHSSEKSKCQGHFDVYKECKKKEREARLERNSKRSFFS
A0A6J1ITM4 cytochrome c oxidase-assembly factor COX23, mitochondrial4.2e-2891.78Show/hide
Query:  MASTSRDPAPPYPSAARISDSPCYPQYSASLKCLEEHSSEKSKCQGHFDVYKECKKKEREARLERNSKRSFFS
        MASTSRDP PPYPSAARISDSPC+ QYSASLKCLEEHSSE+SKCQ HFDVYKECKKKEREARLERN KRSFFS
Subjt:  MASTSRDPAPPYPSAARISDSPCYPQYSASLKCLEEHSSEKSKCQGHFDVYKECKKKEREARLERNSKRSFFS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G02160.1 Cox19 family protein (CHCH motif)6.2e-2478.57Show/hide
Query:  TSRDPAPPYPSAARISDSPCYPQYSASLKCLEEHSSEKSKCQGHFDVYKECKKKEREARLERNSKRSFFS
        +++  A  YPSAARISDSPCY QYSASLKCLEE  S+KSKCQ HFDVYKECKKKEREARLERN  RS FS
Subjt:  TSRDPAPPYPSAARISDSPCYPQYSASLKCLEEHSSEKSKCQGHFDVYKECKKKEREARLERNSKRSFFS
AT1G02160.2 Cox19 family protein (CHCH motif)8.7e-1878.18Show/hide
Query:  TSRDPAPPYPSAARISDSPCYPQYSASLKCLEEHSSEKSKCQGHFDVYKECKKKE
        +++  A  YPSAARISDSPCY QYSASLKCLEE  S+KSKCQ HFDVYKECKKKE
Subjt:  TSRDPAPPYPSAARISDSPCYPQYSASLKCLEEHSSEKSKCQGHFDVYKECKKKE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCACTTCCAGGGATCCGGCTCCACCGTACCCCAGTGCTGCTAGAATTTCTGATTCTCCTTGTTATCCTCAGTACAGCGCTTCCCTAAAATGTCTTGAAGAACA
TAGCTCAGAGAAGAGCAAATGTCAAGGACATTTTGATGTTTACAAGGAATGCAAGAAAAAAGAGCGGGAAGCTCGATTGGAACGCAACAGTAAACGGTCTTTCTTCTCAT
GA
mRNA sequenceShow/hide mRNA sequence
CACGCAGCCATTTCAACGAACCTCCATTTTCTACCGAGAGAGAGATTTTCAGTAATGGCTTCCACTTCCAGGGATCCGGCTCCACCGTACCCCAGTGCTGCTAGAATTTC
TGATTCTCCTTGTTATCCTCAGTACAGCGCTTCCCTAAAATGTCTTGAAGAACATAGCTCAGAGAAGAGCAAATGTCAAGGACATTTTGATGTTTACAAGGAATGCAAGA
AAAAAGAGCGGGAAGCTCGATTGGAACGCAACAGTAAACGGTCTTTCTTCTCATGAAATAATCTGCAGGCATTTTGCTTGATGTTGAAGTTTGTAAGTTTAATATGCTTT
ATCTACACACATTCATAACCTTCTTGTAGCAGTAGATTTATCTAGTGCCTCATTTAGATAATGATGCATCATGTATTTCCAACTTACTATCGTTCGTCTATTAAATAAAT
ATGCATACCATTCTGATAAA
Protein sequenceShow/hide protein sequence
MASTSRDPAPPYPSAARISDSPCYPQYSASLKCLEEHSSEKSKCQGHFDVYKECKKKEREARLERNSKRSFFS