; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0003002 (gene) of Snake gourd v1 genome

Gene IDTan0003002
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionX-linked retinitis pigmentosa GTPase regulator-interacting protein 1-like
Genome locationLG05:65520740..65521636
RNA-Seq ExpressionTan0003002
SyntenyTan0003002
Gene Ontology termsNA
InterPro domainsIPR016024 - Armadillo-type fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583719.1 hypothetical protein SDJN03_19651, partial [Cucurbita argyrosperma subsp. sororia]1.1e-4964.78Show/hide
Query:  DSNESLNLDDRITNWRRSSKVESLKRMVKFLVSVCVFS----LFLSLFSLFPYSFTVYFSTFLFSLLNHAMERKYMFLICNGILFLLATFSVIED-----
        DS ESL+LD   +    S+ VE LKRMVKF+VS+CVFS    LF S FS+FP+SFTVYFSTFLFSLLNH MERK+MFLICNGILFLLAT SV++D     
Subjt:  DSNESLNLDDRITNWRRSSKVESLKRMVKFLVSVCVFS----LFLSLFSLFPYSFTVYFSTFLFSLLNHAMERKYMFLICNGILFLLATFSVIED-----

Query:  SSSSSSSFGTCSFSHSDIDDHQFGPLVAAI-----EDQNQEIETEEEVEEINGDEEEEDDDDDDEGCFTDEVEEEEEEEEEEEEEEEEEGKGSELELVVS
        SSSSSSSFG CSFSHS   D     LVA        D+++E E EE  +E   + EE+++D++DEGCFT+EV    EEEEEEEEEEEEEG   +LE+VVS
Subjt:  SSSSSSSFGTCSFSHSDIDDHQFGPLVAAI-----EDQNQEIETEEEVEEINGDEEEEDDDDDDEGCFTDEVEEEEEEEEEEEEEEEEEGKGSELELVVS

Query:  TEELNKKIEEFIRKMKEEMRIEAAQTQLIV
        TEELNKKIEEFIRKMKEEMRIEAAQTQ ++
Subjt:  TEELNKKIEEFIRKMKEEMRIEAAQTQLIV

KAG7019366.1 hypothetical protein SDJN02_18326, partial [Cucurbita argyrosperma subsp. argyrosperma]1.9e-4965.37Show/hide
Query:  DSNESLNLDDRITNWRRSSKVESLKRMVKFLVSVCVFS----LFLSLFSLFPYSFTVYFSTFLFSLLNHAMERKYMFLICNGILFLLATFSVIED-----
        DS ESL+LD   +    S+ VE LKRMVKF+VS+CVFS    LF S FSLFP+SFTVYFSTFLFSLLNH MERK+MFLICNGILFLLAT SV++D     
Subjt:  DSNESLNLDDRITNWRRSSKVESLKRMVKFLVSVCVFS----LFLSLFSLFPYSFTVYFSTFLFSLLNHAMERKYMFLICNGILFLLATFSVIED-----

Query:  SSSSSSSFGTCSFSHSDIDDHQFGPLVAAI-----EDQNQEIETEEEVEEINGDE-EEEDDDDDDEGCFTDEVEEEEEEEEEEEEEEEEEGKGSELELVV
        SSSSSSSFG CSFSHS   D     LVA        D+++E E E+E E+ + DE EE+++D++DEGCFT+EV     EEEEEEEEEEEEG   +LE+VV
Subjt:  SSSSSSSFGTCSFSHSDIDDHQFGPLVAAI-----EDQNQEIETEEEVEEINGDE-EEEDDDDDDEGCFTDEVEEEEEEEEEEEEEEEEEGKGSELELVV

Query:  STEELNKKIEEFIRKMKEEMRIEAAQTQLIV
        STEELNKKIEEFIRKMKEEMRIEAAQTQ ++
Subjt:  STEELNKKIEEFIRKMKEEMRIEAAQTQLIV

XP_022927104.1 X-linked retinitis pigmentosa GTPase regulator-interacting protein 1-like [Cucurbita moschata]5.9e-4360.76Show/hide
Query:  DSNESLNLDDRITNWRRSSKVESLKRMVKFLVSVCVFS----LFLSLFSLFPYSFTVYFSTFLFSLLNHAMERKYMFLICNGILFLLATFSVIED-----
        DS ESL+LD   +    ++ VE LKRMVKF+VS+CVFS    LF S FSLFP+SFTVYFSTFLFSLLNH MERK+MFLICNGILFLLAT SV++D     
Subjt:  DSNESLNLDDRITNWRRSSKVESLKRMVKFLVSVCVFS----LFLSLFSLFPYSFTVYFSTFLFSLLNHAMERKYMFLICNGILFLLATFSVIED-----

Query:  -SSSSSSSFGTCSFSHSDIDDHQFGPLVAAIEDQNQEIETEEEVEEINGDEEEEDDDDDDEGCFTDEVEEEEEEEEEE-----------EEEEEEEGKGS
         SSSSSSSFG  SFSHS   D     LVA   D     E+EE+  E + DE E++ +D+ E    DE E+E EE+EE+           EEEEEEEGK  
Subjt:  -SSSSSSSFGTCSFSHSDIDDHQFGPLVAAIEDQNQEIETEEEVEEINGDEEEEDDDDDDEGCFTDEVEEEEEEEEEE-----------EEEEEEEGKGS

Query:  ELELVVSTEELNKKIEEFIRKMKEEMRIEAAQTQLIV
        +LE+VVSTEELNKKIEEFIRKMKEEMRIEAAQTQ ++
Subjt:  ELELVVSTEELNKKIEEFIRKMKEEMRIEAAQTQLIV

XP_031736046.1 uncharacterized protein LOC105434473 [Cucumis sativus]4.0e-3960.26Show/hide
Query:  SNESLNLDDRITNWRR-------SSKVESLKRMVKFLVSVCVFSLFLSLFSLFPYSFTVYFSTFLFSLLNHAMERKYMFLICN-GILFLLATFSVIEDSS
        S  SLNL++    +R        SSKVE LKRMVK  V   +  LF SLFSLFP+SF+VYFSTFLFS+L HA+ERKYMFLICN GILFLLAT SV   SS
Subjt:  SNESLNLDDRITNWRR-------SSKVESLKRMVKFLVSVCVFSLFLSLFSLFPYSFTVYFSTFLFSLLNHAMERKYMFLICN-GILFLLATFSVIEDSS

Query:  SSSSSFGT-CSFSHS------DIDDHQFGPLVAAIEDQNQEIETEEEVEEING---DEEEEDDDDDDEGCFTDEVEEEEEEEEEEEEEEEEEGKGSELEL
        SSSSSFG  C F HS      ++ +H     VA  E+ + +   EEE E+  G    E  E++ ++DEGCFTDEV    EEEEEEEEE+++EGK  ELE+
Subjt:  SSSSSFGT-CSFSHS------DIDDHQFGPLVAAIEDQNQEIETEEEVEEING---DEEEEDDDDDDEGCFTDEVEEEEEEEEEEEEEEEEEGKGSELEL

Query:  VVSTEELNKKIEEFIRKMKEEMRIEAAQTQLIVV
        VVSTEELNKKIEEFIRKMKEEMRIEAAQT LI V
Subjt:  VVSTEELNKKIEEFIRKMKEEMRIEAAQTQLIVV

XP_038877796.1 glutamic acid-rich protein-like [Benincasa hispida]1.3e-5066.12Show/hide
Query:  MEQNPDRG--DSNESLNLDDRITNWRRS-------SKVESLKRMVKFLVSVCVFSLFLSLFSLFPYSFTVYFSTFLFSLLNHAMERKYMFLICNGILFLL
        ME+ P+    DSN+SLNL D   + R S       SKVE L RMVKF V   V +LF S FSLFP+SF+VYFSTF+FSLLNHAMERKYMFLICNGILFLL
Subjt:  MEQNPDRG--DSNESLNLDDRITNWRRS-------SKVESLKRMVKFLVSVCVFSLFLSLFSLFPYSFTVYFSTFLFSLLNHAMERKYMFLICNGILFLL

Query:  ATFSVIEDSSSSSSSFGTCSF-SHSDIDDHQ--FGPLVAAIE--------DQNQEIETEEEVEEINGDEEEEDDDDDDEGCFTDEVEEEEEEEEEEEEEE
        AT SVIEDSSSSSSSFGTCSF SHSD   H      LVAAI+         QNQE E EEE EEI+ DE EE + ++DEGCFTDEV         E+++E
Subjt:  ATFSVIEDSSSSSSSFGTCSF-SHSDIDDHQ--FGPLVAAIE--------DQNQEIETEEEVEEINGDEEEEDDDDDDEGCFTDEVEEEEEEEEEEEEEE

Query:  EEEGKGSELELVVSTEELNKKIEEFIRKMKEEMRIEAAQTQLIVV
        EEEGK  ELE+VVSTEELNKKIEEFIRKMKEEMRIEAAQTQLI V
Subjt:  EEEGKGSELELVVSTEELNKKIEEFIRKMKEEMRIEAAQTQLIVV

TrEMBL top hitse value%identityAlignment
A0A061GIF6 Uncharacterized protein1.8e-1347.11Show/hide
Query:  LKRMVKFLVSVCVFSLFL---SLFSLFPYSFTVYFSTFLFSLLNHAMERKYMFLICNGILFLLATFSVIEDSSSSSSSFG----TCSFS----------H
        LKR ++ +VSV + S FL   S F +FP+SF+VYFSTFLFS   H +ERKYMFLICNGIL  LA  SV   SS S S  G    T S +          +
Subjt:  LKRMVKFLVSVCVFSLFL---SLFSLFPYSFTVYFSTFLFSLLNHAMERKYMFLICNGILFLLATFSVIEDSSSSSSSFG----TCSFS----------H

Query:  SDIDDHQFGPLVAAIEDQNQ--EIETEEEVEEIN----GDEEEEDDDDDDEGCFTDEVEEEEEEEEE-----EEEEEEEEGKGSEL---ELVVSTEELNK
        SD  D+   PLVA  E+     E E EE+ E+ N    G  E ++DD++ E   +  VE+ E +E E     +E++ +EEG G+ L   E V STE+LN+
Subjt:  SDIDDHQFGPLVAAIEDQNQ--EIETEEEVEEIN----GDEEEEDDDDDDEGCFTDEVEEEEEEEEE-----EEEEEEEEGKGSEL---ELVVSTEELNK

Query:  KIEEFIRKMKEEMRIEAAQTQLIVV
        K EEFIRKMKEE+RIE AQ QLI V
Subjt:  KIEEFIRKMKEEMRIEAAQTQLIVV

A0A0A0LVQ2 Uncharacterized protein2.0e-2053.65Show/hide
Query:  SNESLNLDDRITNWRR-------SSKVESLKRMVKFLVSVCVFSLFLSLFSLFPYSFTVYFSTFLFSLLNHAMERKYMFLICN-GILFLLATFSVIEDSS
        S  SLNL++    +R        SSKVE LKRMVK  V   +  LF SLFSLFP+SF+VYFSTFLFS+L HA+ERKYMFLICN GILFLLAT SV   SS
Subjt:  SNESLNLDDRITNWRR-------SSKVESLKRMVKFLVSVCVFSLFLSLFSLFPYSFTVYFSTFLFSLLNHAMERKYMFLICN-GILFLLATFSVIEDSS

Query:  SSSSSFGT-CSFSHS------DIDDHQFGPLVAAIEDQNQEIETEEEVEEING---DEEEEDDDDDDEGCFTDEVEEEEEEEEEEEEEEEEE
        SSSSSFG  C F HS      ++ +H     VA  E+ + +   EEE E+  G    E  E++ ++DEGCFTDEVEEEEEEE+E ++  ++E
Subjt:  SSSSSFGT-CSFSHS------DIDDHQFGPLVAAIEDQNQEIETEEEVEEING---DEEEEDDDDDDEGCFTDEVEEEEEEEEEEEEEEEEE

A0A6J1CN51 nardilysin-like8.7e-3251.98Show/hide
Query:  MEQNPDRG--DSNESLNLDDRI-TNWRRSSKVESLKRMVKFLVSVCVF----SLFLSLFSLFPYSFTVYFSTFLFSLLNHAMERKYMFLICNGILFLLAT
        ME++P     DS+ESLNLD    TNW  SSKV+ LK MVKF+VSVCVF    +LFLSLFSLFP+SFT+YFS  LFSLLNHA++R YMFL+CNGIL LLAT
Subjt:  MEQNPDRG--DSNESLNLDDRI-TNWRRSSKVESLKRMVKFLVSVCVF----SLFLSLFSLFPYSFTVYFSTFLFSLLNHAMERKYMFLICNGILFLLAT

Query:  FSVIEDSSSSSSSFGTCSFSHSDIDDHQFGPLVAAIEDQNQEIETEEEVEEINGDEEEED-----------------DDDDDEGCFTDEVEEEEEEEEEE
         S ++ S+S                          I   + E+  EE+ EE+  D+++                   +++DDEGCFTDEVEEEEEEEE +
Subjt:  FSVIEDSSSSSSSFGTCSFSHSDIDDHQFGPLVAAIEDQNQEIETEEEVEEINGDEEEED-----------------DDDDDEGCFTDEVEEEEEEEEEE

Query:  EEEEEEEGKGSELELVVSTEELNKKIEEFIRKMKEEMRIE---AAQTQLIVV
          E        ELE+VVSTEELNKKIEEFIRKMKEEMRI+   AAQTQL+ V
Subjt:  EEEEEEEGKGSELELVVSTEELNKKIEEFIRKMKEEMRIE---AAQTQLIVV

A0A6J1EH25 X-linked retinitis pigmentosa GTPase regulator-interacting protein 1-like2.9e-4360.76Show/hide
Query:  DSNESLNLDDRITNWRRSSKVESLKRMVKFLVSVCVFS----LFLSLFSLFPYSFTVYFSTFLFSLLNHAMERKYMFLICNGILFLLATFSVIED-----
        DS ESL+LD   +    ++ VE LKRMVKF+VS+CVFS    LF S FSLFP+SFTVYFSTFLFSLLNH MERK+MFLICNGILFLLAT SV++D     
Subjt:  DSNESLNLDDRITNWRRSSKVESLKRMVKFLVSVCVFS----LFLSLFSLFPYSFTVYFSTFLFSLLNHAMERKYMFLICNGILFLLATFSVIED-----

Query:  -SSSSSSSFGTCSFSHSDIDDHQFGPLVAAIEDQNQEIETEEEVEEINGDEEEEDDDDDDEGCFTDEVEEEEEEEEEE-----------EEEEEEEGKGS
         SSSSSSSFG  SFSHS   D     LVA   D     E+EE+  E + DE E++ +D+ E    DE E+E EE+EE+           EEEEEEEGK  
Subjt:  -SSSSSSSFGTCSFSHSDIDDHQFGPLVAAIEDQNQEIETEEEVEEINGDEEEEDDDDDDEGCFTDEVEEEEEEEEEE-----------EEEEEEEGKGS

Query:  ELELVVSTEELNKKIEEFIRKMKEEMRIEAAQTQLIV
        +LE+VVSTEELNKKIEEFIRKMKEEMRIEAAQTQ ++
Subjt:  ELELVVSTEELNKKIEEFIRKMKEEMRIEAAQTQLIV

B9SA78 Uncharacterized protein1.8e-1345.58Show/hide
Query:  LKRMVKFLVSVCVFSLFL---SLFSLFPYSFTVYFSTFLFSLLNHAMERKYMFLICNGILFLLATFSVIEDSSSSSSSFGTCSFSH---------SDIDD
        LK+   FLV+V +FSLFL   S FS+ P SF VYF+T LFS L   +ERKYMFLICNGIL  LA  SV    SSSSS  G+  F +          D   
Subjt:  LKRMVKFLVSVCVFSLFL---SLFSLFPYSFTVYFSTFLFSLLNHAMERKYMFLICNGILFLLATFSVIEDSSSSSSSFGTCSFSH---------SDIDD

Query:  HQFGPLVAAIEDQNQE--------IETEEEVEEINGDEEEEDDDDDDEGCFT-DEVEEEEEEEEEEEEEEEEEGKGSELELVVSTEELNKKIEEFIRKMK
         +   LVA ++++  E         E EEE EE  G++E+E    + E     DE   +E E  E+++EE+ +G+G   + + +TEELN++IEEFIRKMK
Subjt:  HQFGPLVAAIEDQNQE--------IETEEEVEEINGDEEEEDDDDDDEGCFT-DEVEEEEEEEEEEEEEEEEEGKGSELELVVSTEELNKKIEEFIRKMK

Query:  EEMRIEAAQTQLIVV
        EE+RIE AQ QLI V
Subjt:  EEMRIEAAQTQLIVV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G13130.1 unknown protein4.4e-0433.33Show/hide
Query:  KVESLKRMVKFL-VSVCVFSLFLSLFSLFPYSFTVYFSTFLFSLLNHAMERKYMFLICNGILFLLATFSVIEDSSSSSSSFGTCSFSHSDIDDHQFGPLV
        K E LK++ KF+ VS+ + SL  S      + F +Y   F+  L+ HA+++ YMFL+CNG++ ++A  S +  SS       + +    D  D +    +
Subjt:  KVESLKRMVKFL-VSVCVFSLFLSLFSLFPYSFTVYFSTFLFSLLNHAMERKYMFLICNGILFLLATFSVIEDSSSSSSSFGTCSFSHSDIDDHQFGPLV

Query:  AAIEDQN-----------QEIETEEEVEEINGDEEEEDDDDDDEGCFTDEVEEEEEEEEEEEEEEEEEGKGSELELVVST-EELNKKIEEFIRKMKEEMR
          +E ++           +E+  EE+ +    ++ EE+DDDD+     D   EEE         EEEEG    + ++ ST EE+NKK +EFIRKMKEE+R
Subjt:  AAIEDQN-----------QEIETEEEVEEINGDEEEEDDDDDDEGCFTDEVEEEEEEEEEEEEEEEEEGKGSELELVVST-EELNKKIEEFIRKMKEEMR

Query:  IEAAQTQLIV
        IEA +  ++V
Subjt:  IEAAQTQLIV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACAAAACCCAGATCGAGGCGATTCAAATGAAAGTTTGAATCTTGATGATAGAATTACAAATTGGAGGAGGAGCAGCAAAGTTGAGAGCTTGAAAAGGATGGTGAA
GTTTCTTGTGTCAGTTTGTGTGTTTTCTTTGTTTTTGTCTCTTTTCTCTCTCTTCCCTTATTCCTTCACTGTCTATTTCTCCACTTTCCTCTTCTCTCTCCTCAACCATG
CCATGGAGAGAAAGTACATGTTCTTAATTTGCAATGGAATCCTCTTTCTTCTTGCCACTTTCTCTGTTATTGAAGATTCTTCTTCTTCTTCTTCTTCTTTTGGAACTTGT
TCATTTTCCCACTCTGATATTGATGATCATCAGTTTGGACCTCTTGTGGCTGCCATTGAAGACCAAAATCAAGAAATTGAAACAGAAGAAGAAGTTGAAGAAATTAATGG
AGATGAAGAAGAAGAAGATGATGATGATGATGATGAAGGGTGTTTTACAGATGAGGTTGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG
GGAAAGGGAGTGAATTAGAGTTGGTGGTGAGTACAGAAGAATTGAACAAGAAAATAGAGGAGTTTATTAGGAAAATGAAAGAGGAAATGAGGATTGAAGCTGCTCAAACT
CAGCTCATTGTTGTGTAA
mRNA sequenceShow/hide mRNA sequence
GTGCAGTTCACAAAACCAAATCCAAAATCAAAATCTCTCCAATTTCAGGAAAAAAATAAAGCTAATTAAAGCTGTGATTTTTGTGATCCTCTTTGAAAATGGAACAAAAC
CCAGATCGAGGCGATTCAAATGAAAGTTTGAATCTTGATGATAGAATTACAAATTGGAGGAGGAGCAGCAAAGTTGAGAGCTTGAAAAGGATGGTGAAGTTTCTTGTGTC
AGTTTGTGTGTTTTCTTTGTTTTTGTCTCTTTTCTCTCTCTTCCCTTATTCCTTCACTGTCTATTTCTCCACTTTCCTCTTCTCTCTCCTCAACCATGCCATGGAGAGAA
AGTACATGTTCTTAATTTGCAATGGAATCCTCTTTCTTCTTGCCACTTTCTCTGTTATTGAAGATTCTTCTTCTTCTTCTTCTTCTTTTGGAACTTGTTCATTTTCCCAC
TCTGATATTGATGATCATCAGTTTGGACCTCTTGTGGCTGCCATTGAAGACCAAAATCAAGAAATTGAAACAGAAGAAGAAGTTGAAGAAATTAATGGAGATGAAGAAGA
AGAAGATGATGATGATGATGATGAAGGGTGTTTTACAGATGAGGTTGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGGAAAGGGAGTG
AATTAGAGTTGGTGGTGAGTACAGAAGAATTGAACAAGAAAATAGAGGAGTTTATTAGGAAAATGAAAGAGGAAATGAGGATTGAAGCTGCTCAAACTCAGCTCATTGTT
GTGTAATAATTTTTAAGTTCTATGCATGGCTAATTAATTTAATATTATATTGTTATAATGAAAGCTTTTTTTGATATATAAATGTGTGTGTTTTGTGTTTTTAATAAAAA
TGGTGATCCAACTTCAA
Protein sequenceShow/hide protein sequence
MEQNPDRGDSNESLNLDDRITNWRRSSKVESLKRMVKFLVSVCVFSLFLSLFSLFPYSFTVYFSTFLFSLLNHAMERKYMFLICNGILFLLATFSVIEDSSSSSSSFGTC
SFSHSDIDDHQFGPLVAAIEDQNQEIETEEEVEEINGDEEEEDDDDDDEGCFTDEVEEEEEEEEEEEEEEEEEGKGSELELVVSTEELNKKIEEFIRKMKEEMRIEAAQT
QLIVV