CuGenDBv2

Gene ID	Tan0003027
Organism	Trichosanthes anguina (Snake gourd v1)
Description	translocator protein homolog
Genome location	LG10:8862922..8863446
RNA-Seq Expression	Tan0003027
Synteny	Tan0003027
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR004307 - TspO/MBR-related protein IPR038330 - TspO/MBR-related superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6597521.1 Translocator protein-like protein, partial [Cucurbita argyrosperma subsp. sororia]

3.4e-78

90.59

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Query:  SSSTTFKSRPESKYTKAKRALRSLAVSVAIPLTLKIAVIFLFGRSSRHFPNRNRPIWMAPLWFLHLSSIGSSFLIGLSAWLVWADGGFHGGSNALPLYIA
        SSS  FKSRPESKYTKAKRALRSLAVSVAIPLTL IAVIFLFGRSSRHFPNRNRPIW+APLW LHLSSI SSFLIGL+AWLVWADGGFH GSNALPLYIA
Subjt:  SSSTTFKSRPESKYTKAKRALRSLAVSVAIPLTLKIAVIFLFGRSSRHFPNRNRPIWMAPLWFLHLSSIGSSFLIGLSAWLVWADGGFHGGSNALPLYIA

Query:  HLSLSVVWNPLVLVIRAFLLAFLFCVLDFLTLFACYRTFKRINPFAKDLIKPCLAWTAYLSALTYVLIDL
        HLSLSVVWNPLVLVIRA LLAFLFCVLD +TL+ACYRTFKR+NPFAKDLIKPCLAWTAYL A+TYV IDL
Subjt:  HLSLSVVWNPLVLVIRAFLLAFLFCVLDFLTLFACYRTFKRINPFAKDLIKPCLAWTAYLSALTYVLIDL

XP_022945022.1 translocator protein homolog [Cucurbita moschata]

3.4e-78

90.59

Show/hide

Query:  SSSTTFKSRPESKYTKAKRALRSLAVSVAIPLTLKIAVIFLFGRSSRHFPNRNRPIWMAPLWFLHLSSIGSSFLIGLSAWLVWADGGFHGGSNALPLYIA
        SSS  FKSRPESKYTKAKRALRSLAVSVAIPLTL IAVIFLFGRSSRHFPNRNRPIW+APLW LHLSSI SSFLIGL+AWLVWADGGFH GSNALPLYIA
Subjt:  SSSTTFKSRPESKYTKAKRALRSLAVSVAIPLTLKIAVIFLFGRSSRHFPNRNRPIWMAPLWFLHLSSIGSSFLIGLSAWLVWADGGFHGGSNALPLYIA

Query:  HLSLSVVWNPLVLVIRAFLLAFLFCVLDFLTLFACYRTFKRINPFAKDLIKPCLAWTAYLSALTYVLIDL
        HLSLSVVWNPLVLVIRA LLAFLFCVLD +TL+ACYRTFKR+NPFAKDLIKPCLAWTAYL A+TYV IDL
Subjt:  HLSLSVVWNPLVLVIRAFLLAFLFCVLDFLTLFACYRTFKRINPFAKDLIKPCLAWTAYLSALTYVLIDL

XP_022973726.1 translocator protein homolog [Cucurbita maxima]

3.0e-79

91.18

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Query:  SSSTTFKSRPESKYTKAKRALRSLAVSVAIPLTLKIAVIFLFGRSSRHFPNRNRPIWMAPLWFLHLSSIGSSFLIGLSAWLVWADGGFHGGSNALPLYIA
        SSS  FKSRPESKYTKAKRALRSLAVSVAIPLTL IAVIFLFGRSSRHFPNRNRPIW+APLW LHLSSI SSFLIGL+AWLVWADGGFH GSNALPLYIA
Subjt:  SSSTTFKSRPESKYTKAKRALRSLAVSVAIPLTLKIAVIFLFGRSSRHFPNRNRPIWMAPLWFLHLSSIGSSFLIGLSAWLVWADGGFHGGSNALPLYIA

Query:  HLSLSVVWNPLVLVIRAFLLAFLFCVLDFLTLFACYRTFKRINPFAKDLIKPCLAWTAYLSALTYVLIDL
        HLSLSVVWNPLVLVIRA LLAFLFCVLDF+TL+ACYRTFKR+NPFAKDLIKPCLAWTAYL A+TYV IDL
Subjt:  HLSLSVVWNPLVLVIRAFLLAFLFCVLDFLTLFACYRTFKRINPFAKDLIKPCLAWTAYLSALTYVLIDL

XP_023540366.1 translocator protein homolog [Cucurbita pepo subsp. pepo]

1.5e-78

90.59

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Query:  SSSTTFKSRPESKYTKAKRALRSLAVSVAIPLTLKIAVIFLFGRSSRHFPNRNRPIWMAPLWFLHLSSIGSSFLIGLSAWLVWADGGFHGGSNALPLYIA
        SSS  FKSRPESKYTKAKRALRSLAVSVAIPLTL IAVIFLFGRSSRHFPNRNRPIW+APLW LHLSSI SSFLIGL+AWLVWADGGFH GSNALPLYIA
Subjt:  SSSTTFKSRPESKYTKAKRALRSLAVSVAIPLTLKIAVIFLFGRSSRHFPNRNRPIWMAPLWFLHLSSIGSSFLIGLSAWLVWADGGFHGGSNALPLYIA

Query:  HLSLSVVWNPLVLVIRAFLLAFLFCVLDFLTLFACYRTFKRINPFAKDLIKPCLAWTAYLSALTYVLIDL
        HLSLSVVWNPLVLVIRA LLAFLFCVLD +TL+ACYRTFKR+NPFAKDLIKPCLAWTAYL A+TYV IDL
Subjt:  HLSLSVVWNPLVLVIRAFLLAFLFCVLDFLTLFACYRTFKRINPFAKDLIKPCLAWTAYLSALTYVLIDL

XP_038878873.1 translocator protein homolog [Benincasa hispida]

8.0e-80

90.06

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Query:  SSSSTTFKSRPESKYTKAKRALRSLAVSVAIPLTLKIAVIFLFGRSSRHFPNRNRPIWMAPLWFLHLSSIGSSFLIGLSAWLVWADGGFHGGSNALPLYI
        SSS+  FKSRPESKYTKAKRALRSLAVSVAIPL+L IAVIFLFGRS+RHFPNRNRPIW+ PLW LHLSSIGSSFLIGL+AWLVWADGGFHGGSNALPLYI
Subjt:  SSSSTTFKSRPESKYTKAKRALRSLAVSVAIPLTLKIAVIFLFGRSSRHFPNRNRPIWMAPLWFLHLSSIGSSFLIGLSAWLVWADGGFHGGSNALPLYI

Query:  AHLSLSVVWNPLVLVIRAFLLAFLFCVLDFLTLFACYRTFKRINPFAKDLIKPCLAWTAYLSALTYVLIDL
        AHLSLSVVWNPLVLVIR+ +LAFLFCVLDF+TLFACYRTFKR+NPFAKDLIKPCLAWTAYLSA+TYV IDL
Subjt:  AHLSLSVVWNPLVLVIRAFLLAFLFCVLDFLTLFACYRTFKRINPFAKDLIKPCLAWTAYLSALTYVLIDL

TrEMBL top hits

e value

%identity

Alignment

A0A1S4DTF2 translocator protein homolog

9.9e-76

85.29

Show/hide

Query:  SSSTTFKSRPESKYTKAKRALRSLAVSVAIPLTLKIAVIFLFGRSSRHFPNRNRPIWMAPLWFLHLSSIGSSFLIGLSAWLVWADGGFHGGSNALPLYIA
        SS+  FKSRPESKYTKAKRALRSLAVSVAIP++L IAVIFLFGRSSRHFPNRNRPIW+ PLW L LSSIGSSFL+GL+AWLVWADGGFHGGSNALPLYIA
Subjt:  SSSTTFKSRPESKYTKAKRALRSLAVSVAIPLTLKIAVIFLFGRSSRHFPNRNRPIWMAPLWFLHLSSIGSSFLIGLSAWLVWADGGFHGGSNALPLYIA

Query:  HLSLSVVWNPLVLVIRAFLLAFLFCVLDFLTLFACYRTFKRINPFAKDLIKPCLAWTAYLSALTYVLIDL
        HLSLSVVW+PLVLVIR+ ++AFLFCVLDF+TLFACYR F+R+NPFAKDL+KPCLAWTAYLSA+TYV I L
Subjt:  HLSLSVVWNPLVLVIRAFLLAFLFCVLDFLTLFACYRTFKRINPFAKDLIKPCLAWTAYLSALTYVLIDL

A0A5D3CWC4 Translocator protein-like protein

9.9e-76

85.29

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Query:  SSSTTFKSRPESKYTKAKRALRSLAVSVAIPLTLKIAVIFLFGRSSRHFPNRNRPIWMAPLWFLHLSSIGSSFLIGLSAWLVWADGGFHGGSNALPLYIA
        SS+  FKSRPESKYTKAKRALRSLAVSVAIP++L IAVIFLFGRSSRHFPNRNRPIW+ PLW L LSSIGSSFL+GL+AWLVWADGGFHGGSNALPLYIA
Subjt:  SSSTTFKSRPESKYTKAKRALRSLAVSVAIPLTLKIAVIFLFGRSSRHFPNRNRPIWMAPLWFLHLSSIGSSFLIGLSAWLVWADGGFHGGSNALPLYIA

Query:  HLSLSVVWNPLVLVIRAFLLAFLFCVLDFLTLFACYRTFKRINPFAKDLIKPCLAWTAYLSALTYVLIDL
        HLSLSVVW+PLVLVIR+ ++AFLFCVLDF+TLFACYR F+R+NPFAKDL+KPCLAWTAYLSA+TYV I L
Subjt:  HLSLSVVWNPLVLVIRAFLLAFLFCVLDFLTLFACYRTFKRINPFAKDLIKPCLAWTAYLSALTYVLIDL

A0A6J1CCG7 translocator protein homolog

1.7e-75

88.82

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Query:  SSSTTFKSRPESKYTKAKRALRSLAVSVAIPLTLKIAVIFLFGRSSRHFPNRNRPIWMAPLWFLHLSSIGSSFLIGLSAWLVWADGGFHGGSNALPLYIA
        SSS  FKSRPESKYTKAKRALRSLAVSVAIPL+L I VIFLFG S RHFPNR+RP+WMAPLWFLHLSSIGSSFLIGLSAWLVWADGGFHG S ALPLYIA
Subjt:  SSSTTFKSRPESKYTKAKRALRSLAVSVAIPLTLKIAVIFLFGRSSRHFPNRNRPIWMAPLWFLHLSSIGSSFLIGLSAWLVWADGGFHGGSNALPLYIA

Query:  HLSLSVVWNPLVLVIRAFLLAFLFCVLDFLTLFACYRTFKRINPFAKDLIKPCLAWTAYLSALTYVLIDL
        HL+LSVVWNPLVLVIRA LLAFLFCVLDF+TLFACYR+FKR+NPFAKDLIKPCLA TAYLSA+TYVLI L
Subjt:  HLSLSVVWNPLVLVIRAFLLAFLFCVLDFLTLFACYRTFKRINPFAKDLIKPCLAWTAYLSALTYVLIDL

A0A6J1FZS9 translocator protein homolog

1.6e-78

90.59

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Query:  SSSTTFKSRPESKYTKAKRALRSLAVSVAIPLTLKIAVIFLFGRSSRHFPNRNRPIWMAPLWFLHLSSIGSSFLIGLSAWLVWADGGFHGGSNALPLYIA
        SSS  FKSRPESKYTKAKRALRSLAVSVAIPLTL IAVIFLFGRSSRHFPNRNRPIW+APLW LHLSSI SSFLIGL+AWLVWADGGFH GSNALPLYIA
Subjt:  SSSTTFKSRPESKYTKAKRALRSLAVSVAIPLTLKIAVIFLFGRSSRHFPNRNRPIWMAPLWFLHLSSIGSSFLIGLSAWLVWADGGFHGGSNALPLYIA

Query:  HLSLSVVWNPLVLVIRAFLLAFLFCVLDFLTLFACYRTFKRINPFAKDLIKPCLAWTAYLSALTYVLIDL
        HLSLSVVWNPLVLVIRA LLAFLFCVLD +TL+ACYRTFKR+NPFAKDLIKPCLAWTAYL A+TYV IDL
Subjt:  HLSLSVVWNPLVLVIRAFLLAFLFCVLDFLTLFACYRTFKRINPFAKDLIKPCLAWTAYLSALTYVLIDL

A0A6J1ICB9 translocator protein homolog

1.5e-79

91.18

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Query:  SSSTTFKSRPESKYTKAKRALRSLAVSVAIPLTLKIAVIFLFGRSSRHFPNRNRPIWMAPLWFLHLSSIGSSFLIGLSAWLVWADGGFHGGSNALPLYIA
        SSS  FKSRPESKYTKAKRALRSLAVSVAIPLTL IAVIFLFGRSSRHFPNRNRPIW+APLW LHLSSI SSFLIGL+AWLVWADGGFH GSNALPLYIA
Subjt:  SSSTTFKSRPESKYTKAKRALRSLAVSVAIPLTLKIAVIFLFGRSSRHFPNRNRPIWMAPLWFLHLSSIGSSFLIGLSAWLVWADGGFHGGSNALPLYIA

Query:  HLSLSVVWNPLVLVIRAFLLAFLFCVLDFLTLFACYRTFKRINPFAKDLIKPCLAWTAYLSALTYVLIDL
        HLSLSVVWNPLVLVIRA LLAFLFCVLDF+TL+ACYRTFKR+NPFAKDLIKPCLAWTAYL A+TYV IDL
Subjt:  HLSLSVVWNPLVLVIRAFLLAFLFCVLDFLTLFACYRTFKRINPFAKDLIKPCLAWTAYLSALTYVLIDL

SwissProt top hits

e value

%identity

Alignment

O82245 Translocator protein homolog

2.8e-27

39.13

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Query:  KSRPESKYTKAKRALRSLAVSVAIPLTLKIAVIFLFGRSSRHFPNRNRPIWMAPLWFLHLSSIGSSFLIGLSAWLVWADGGFHGGSNALPLYIAHLSLSV
        K + + K   AKR L+SL V+VA P+ + +   +  G S  +        W+ PLW LH + + SS L+GL+AWLVW DGGFH   NAL LY+A   L +
Subjt:  KSRPESKYTKAKRALRSLAVSVAIPLTLKIAVIFLFGRSSRHFPNRNRPIWMAPLWFLHLSSIGSSFLIGLSAWLVWADGGFHGGSNALPLYIAHLSLSV

Query:  VWNPLVLVIRAFLLAFLFCVLDFLTLFACYRTFKRINPFAKDLIKPCLAWTAYLSALTYVL
        VW+P+   + + +      +     LF CY+ F  I+P A +L+KPCLAW A+++A+   L
Subjt:  VWNPLVLVIRAFLLAFLFCVLDFLTLFACYRTFKRINPFAKDLIKPCLAWTAYLSALTYVL

Arabidopsis top hits

e value

%identity

Alignment

AT2G47770.1 TSPO(outer membrane tryptophan-rich sensory protein)-related

2.0e-28

39.13

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Query:  KSRPESKYTKAKRALRSLAVSVAIPLTLKIAVIFLFGRSSRHFPNRNRPIWMAPLWFLHLSSIGSSFLIGLSAWLVWADGGFHGGSNALPLYIAHLSLSV
        K + + K   AKR L+SL V+VA P+ + +   +  G S  +        W+ PLW LH + + SS L+GL+AWLVW DGGFH   NAL LY+A   L +
Subjt:  KSRPESKYTKAKRALRSLAVSVAIPLTLKIAVIFLFGRSSRHFPNRNRPIWMAPLWFLHLSSIGSSFLIGLSAWLVWADGGFHGGSNALPLYIAHLSLSV

Query:  VWNPLVLVIRAFLLAFLFCVLDFLTLFACYRTFKRINPFAKDLIKPCLAWTAYLSALTYVL
        VW+P+   + + +      +     LF CY+ F  I+P A +L+KPCLAW A+++A+   L
Subjt:  VWNPLVLVIRAFLLAFLFCVLDFLTLFACYRTFKRINPFAKDLIKPCLAWTAYLSALTYVL

Sequences

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CDS sequence

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ATGCCTTCTTCTTCTTCCTCTACGACCTTCAAATCCAGACCAGAATCCAAATACACCAAGGCCAAGAGAGCGCTCCGATCCCTCGCCGTCTCCGTTGCCATTCCTCTCAC
CCTCAAAATCGCCGTCATCTTCCTCTTCGGCCGCTCCTCCCGTCATTTTCCCAATCGGAACCGTCCGATTTGGATGGCGCCACTCTGGTTCCTCCACCTCTCCTCCATCG
GCTCCTCCTTCCTAATCGGCCTCTCCGCCTGGCTCGTTTGGGCCGACGGCGGCTTCCACGGCGGCTCCAACGCCCTTCCCCTCTACATCGCGCATCTCTCCCTCAGCGTC
GTTTGGAATCCTCTCGTGCTCGTGATTCGCGCCTTTCTCCTTGCGTTTCTGTTCTGCGTTTTGGATTTTCTCACTCTGTTCGCTTGTTATCGGACCTTCAAGCGAATCAA
CCCCTTCGCGAAGGATCTGATTAAGCCATGTTTGGCTTGGACTGCGTATCTCTCTGCTCTTACTTATGTGCTTATTGATCTTTGA

mRNA sequence

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Protein sequence

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MPSSSSSTTFKSRPESKYTKAKRALRSLAVSVAIPLTLKIAVIFLFGRSSRHFPNRNRPIWMAPLWFLHLSSIGSSFLIGLSAWLVWADGGFHGGSNALPLYIAHLSLSV
VWNPLVLVIRAFLLAFLFCVLDFLTLFACYRTFKRINPFAKDLIKPCLAWTAYLSALTYVLIDL

Tan0003027 (gene) of Snake gourd v1 genome