; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0003056 (gene) of Snake gourd v1 genome

Gene IDTan0003056
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionRPM1-interacting protein 4-like
Genome locationLG04:766576..767611
RNA-Seq ExpressionTan0003056
SyntenyTan0003056
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
InterPro domainsIPR008700 - RIN4, pathogenic type III effector avirulence factor Avr cleavage site
IPR040387 - RPM1-interacting protein 4/NOI4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573672.1 hypothetical protein SDJN03_27559, partial [Cucurbita argyrosperma subsp. sororia]9.1e-2381.08Show/hide
Query:  AHRGSSLPKFGEWDEKNPAAAEGFTVIFDRARINKKNGGTSNNGIPEEN--QNQYQNKKHETAKKNQKHKCPRK
        AHRGSSLPKFGEWDEK+PAAAEGFTVIFDRAR  KKNGGT NN IP+EN  QNQY++K HE AKKNQK K PRK
Subjt:  AHRGSSLPKFGEWDEKNPAAAEGFTVIFDRARINKKNGGTSNNGIPEEN--QNQYQNKKHETAKKNQKHKCPRK

XP_004135294.1 protein NOI4 [Cucumis sativus]1.8e-1868.24Show/hide
Query:  AHRGSSLPKFGEWDEKNPAAAEGFTVIFDRARINKKNG---GTSNNGIPEENQNQYQNKKHETAKKNQKHKCPRKLK-LCGLCFW
        A +G  LPKFG+WDE+NPAAAEGFTVIF+RAR NKKNG   GT NN IP +NQ+Q    K+E AKKNQKHK PRK K  CG CFW
Subjt:  AHRGSSLPKFGEWDEKNPAAAEGFTVIFDRARINKKNG---GTSNNGIPEENQNQYQNKKHETAKKNQKHKCPRKLK-LCGLCFW

XP_022945363.1 RPM1-interacting protein 4-like [Cucurbita moschata]1.3e-2476.47Show/hide
Query:  AHRGSSLPKFGEWDEKNPAAAEGFTVIFDRARINKKNGGTSNNGIPEEN--QNQYQNKKHETAKKNQKHKCPRKLKLCG--LCFW
        AHRGSSLPKFGEWDEK+PAAAEGFTVIFDRAR  KKNGGT NN IP+EN  QNQY++K HE AKKNQK K PRK K     LCFW
Subjt:  AHRGSSLPKFGEWDEKNPAAAEGFTVIFDRARINKKNGGTSNNGIPEEN--QNQYQNKKHETAKKNQKHKCPRKLKLCG--LCFW

XP_038892913.1 protein NOI4-like isoform X1 [Benincasa hispida]2.2e-2473.81Show/hide
Query:  AHRGSSLPKFGEWDEKNPAAAEGFTVIFDRARINKKNG---GTSNNGIPEENQNQYQNKKHETAKKNQKHKCPRKLKLCGLCFW
        A +G  LPKFGEWDEKNPAAAEGFTVIFDRAR NKKNG   GT NN IP++NQNQYQNKKHE AKKN +H+ PRK K    CFW
Subjt:  AHRGSSLPKFGEWDEKNPAAAEGFTVIFDRARINKKNG---GTSNNGIPEENQNQYQNKKHETAKKNQKHKCPRKLKLCGLCFW

XP_038892914.1 protein NOI4-like isoform X2 [Benincasa hispida]1.1e-2375.31Show/hide
Query:  GSSLPKFGEWDEKNPAAAEGFTVIFDRARINKKNG---GTSNNGIPEENQNQYQNKKHETAKKNQKHKCPRKLKLCGLCFW
        G  LPKFGEWDEKNPAAAEGFTVIFDRAR NKKNG   GT NN IP++NQNQYQNKKHE AKKN +H+ PRK K    CFW
Subjt:  GSSLPKFGEWDEKNPAAAEGFTVIFDRARINKKNG---GTSNNGIPEENQNQYQNKKHETAKKNQKHKCPRKLKLCGLCFW

TrEMBL top hitse value%identityAlignment
A0A0A0KTF9 AvrRpt-cleavage domain-containing protein8.6e-1968.24Show/hide
Query:  AHRGSSLPKFGEWDEKNPAAAEGFTVIFDRARINKKNG---GTSNNGIPEENQNQYQNKKHETAKKNQKHKCPRKLK-LCGLCFW
        A +G  LPKFG+WDE+NPAAAEGFTVIF+RAR NKKNG   GT NN IP +NQ+Q    K+E AKKNQKHK PRK K  CG CFW
Subjt:  AHRGSSLPKFGEWDEKNPAAAEGFTVIFDRARINKKNG---GTSNNGIPEENQNQYQNKKHETAKKNQKHKCPRKLK-LCGLCFW

A0A1S3BEY0 RPM1-interacting protein 4-like4.4e-1562.35Show/hide
Query:  AHRGSSLPKFGEWDEKNPAAAEGFTVIFDRARINKKNG---GTSNNGIPEENQNQYQNKKHETAKK-NQKHKCPRKLKLCGLCFW
        A +G  LPKFG+WDEKNPAAAEGFTVIF+RAR NKKNG   GT NN IP +N+ Q    K E AK+  QK K PRK K    CFW
Subjt:  AHRGSSLPKFGEWDEKNPAAAEGFTVIFDRARINKKNG---GTSNNGIPEENQNQYQNKKHETAKK-NQKHKCPRKLKLCGLCFW

A0A5D3CUX8 RPM1-interacting protein 4-like7.0e-1364.47Show/hide
Query:  AHRGSSLPKFGEWDEKNPAAAEGFTVIFDRARINKKNG---GTSNNGIPEENQNQYQNKKHETAKK-NQKHKCPRK
        A +G  LPKFG+WDEKNPAAAEGFTVIF+RAR NKKNG   GT NN IP +N+ Q    K E AK+  QK K PRK
Subjt:  AHRGSSLPKFGEWDEKNPAAAEGFTVIFDRARINKKNG---GTSNNGIPEENQNQYQNKKHETAKK-NQKHKCPRK

A0A6J1DEH9 RPM1-interacting protein 4-like6.0e-1260.56Show/hide
Query:  GSSLPKFGEWDEKNPAAAEGFTVIFDRARINKKNGG--TSNNGIPEENQNQYQNKKHETAKKNQKHKCPRK
        G +LPKFGEWD K+PA+AEGFT+IF++AR NKKNGG  TS   I ++ QNQ    KHE +KKN K++ PRK
Subjt:  GSSLPKFGEWDEKNPAAAEGFTVIFDRARINKKNGG--TSNNGIPEENQNQYQNKKHETAKKNQKHKCPRK

A0A6J1G0L7 RPM1-interacting protein 4-like6.1e-2576.47Show/hide
Query:  AHRGSSLPKFGEWDEKNPAAAEGFTVIFDRARINKKNGGTSNNGIPEEN--QNQYQNKKHETAKKNQKHKCPRKLKLCG--LCFW
        AHRGSSLPKFGEWDEK+PAAAEGFTVIFDRAR  KKNGGT NN IP+EN  QNQY++K HE AKKNQK K PRK K     LCFW
Subjt:  AHRGSSLPKFGEWDEKNPAAAEGFTVIFDRARINKKNGGTSNNGIPEEN--QNQYQNKKHETAKKNQKHKCPRKLKLCG--LCFW

SwissProt top hitse value%identityAlignment
O22633 Protein NOI48.6e-0867.57Show/hide
Query:  RGSSLPKFGEWDEKNPAAAEGFTVIFDRARINKKNGG
        +G  LPKFGEWD  +PA+AEGFTVIF++AR  KK GG
Subjt:  RGSSLPKFGEWDEKNPAAAEGFTVIFDRARINKKNGG

Arabidopsis top hitse value%identityAlignment
AT2G04410.1 RPM1-interacting protein 4 (RIN4) family protein8.0e-0950Show/hide
Query:  AHRGSSLPKFGEWDEKNPAAAEGFTVIFDRARINKKNGGTSNNGIPEENQNQYQNKKHETAKKNQK
        A +G  LPKFGEWD  +P++AEGFTVIF++AR  KK GG S++  P +++  Y NK  E  +K  K
Subjt:  AHRGSSLPKFGEWDEKNPAAAEGFTVIFDRARINKKNGGTSNNGIPEENQNQYQNKKHETAKKNQK

AT5G55850.1 RPM1-interacting protein 4 (RIN4) family protein6.1e-0967.57Show/hide
Query:  RGSSLPKFGEWDEKNPAAAEGFTVIFDRARINKKNGG
        +G  LPKFGEWD  +PA+AEGFTVIF++AR  KK GG
Subjt:  RGSSLPKFGEWDEKNPAAAEGFTVIFDRARINKKNGG

AT5G55850.2 RPM1-interacting protein 4 (RIN4) family protein6.1e-0967.57Show/hide
Query:  RGSSLPKFGEWDEKNPAAAEGFTVIFDRARINKKNGG
        +G  LPKFGEWD  +PA+AEGFTVIF++AR  KK GG
Subjt:  RGSSLPKFGEWDEKNPAAAEGFTVIFDRARINKKNGG

AT5G55850.3 RPM1-interacting protein 4 (RIN4) family protein6.1e-0967.57Show/hide
Query:  RGSSLPKFGEWDEKNPAAAEGFTVIFDRARINKKNGG
        +G  LPKFGEWD  +PA+AEGFTVIF++AR  KK GG
Subjt:  RGSSLPKFGEWDEKNPAAAEGFTVIFDRARINKKNGG

AT5G63270.1 RPM1-interacting protein 4 (RIN4) family protein5.5e-1047.22Show/hide
Query:  HRGSSLPKFGEWDEKNPAAAEGFTVIFDRARINKKNGGTSNNG-----IPEENQNQYQNKKHETAKKNQKHK
        ++G  LPKFGEWD  NPA+AEGFTVIF +A   KK    S  G      P+ NQN  QN  H +     K+K
Subjt:  HRGSSLPKFGEWDEKNPAAAEGFTVIFDRARINKKNGGTSNNG-----IPEENQNQYQNKKHETAKKNQKHK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTTGAAGTTGTTGAAGCTGCCATTGTTTTATTCCATTTCTGAGTTGTTGGTTTCTTTGCAGGCTCATAGGGGTTCATCTCTGCCCAAATTTGGTGAGTGGGATGA
AAAAAATCCTGCTGCAGCTGAAGGGTTCACTGTGATTTTCGACAGGGCTCGAATTAATAAAAAGAATGGAGGAACTTCAAACAATGGGATACCAGAGGAAAACCAAAACC
AATACCAAAATAAAAAACATGAAACTGCTAAGAAGAATCAAAAGCACAAGTGTCCAAGAAAGCTGAAACTATGCGGCTTGTGCTTTTGGTAG
mRNA sequenceShow/hide mRNA sequence
GGAAAACTCTCTTGCGCGTTTAACAAAGTGGACTTTGTAAGCCAACTGACCAAATTCTCTATAAAAAGAAATCTCAGCTTCCTCTTCTTCTTCAACCACAGCTCTTCTTC
TTCAGCTGAAATACTCTGCAATTTTTCATTTCCTCAATACTGCAATCTTCAGATATGACATCAGTAAGATTCCATTGGTGCCCATTTTTGGTTGCCTTGTTTTCTTCATT
GGTTTTGCTGGTTTTGTTGGTGGGATGAAGTTGAAGTTGTTGAAGCTGCCATTGTTTTATTCCATTTCTGAGTTGTTGGTTTCTTTGCAGGCTCATAGGGGTTCATCTCT
GCCCAAATTTGGTGAGTGGGATGAAAAAAATCCTGCTGCAGCTGAAGGGTTCACTGTGATTTTCGACAGGGCTCGAATTAATAAAAAGAATGGAGGAACTTCAAACAATG
GGATACCAGAGGAAAACCAAAACCAATACCAAAATAAAAAACATGAAACTGCTAAGAAGAATCAAAAGCACAAGTGTCCAAGAAAGCTGAAACTATGCGGCTTGTGCTTT
TGGTAGGCTCTTTTTGTGGCTCTGAAAGAACAAAATTCTGCTGTTTGTGGTGGCTTTTTGAGTGCAGAGATTGATGTTGTAGATTGATCAATTGATTTTGTATATGGGTT
TGCCATTTGGTGTCTTGTTTTTTGAAAAATTTGATGGGGTTTTCTTTCTGTTCATTACATTAGGCTTCTTTGGGTTACCTCCCTCCTCCTGTACTTGATACATTGTTTAT
AGAAAGAAAAAGTTGAGTTATTATTTTATTGTGCAAAAA
Protein sequenceShow/hide protein sequence
MKLKLLKLPLFYSISELLVSLQAHRGSSLPKFGEWDEKNPAAAEGFTVIFDRARINKKNGGTSNNGIPEENQNQYQNKKHETAKKNQKHKCPRKLKLCGLCFW