CuGenDBv2

Gene ID	Tan0003096
Organism	Trichosanthes anguina (Snake gourd v1)
Description	40S ribosomal S3-like protein
Genome location	LG08:455608..459167
RNA-Seq Expression	Tan0003096
Synteny	Tan0003096
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0005634 - nucleus (cellular component) GO:0022627 - cytosolic small ribosomal subunit (cellular component) GO:0003723 - RNA binding (molecular function) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR001351 - Ribosomal protein S3, C-terminal IPR004044 - K Homology domain, type 2 IPR005703 - Ribosomal protein S3, eukaryotic/archaeal IPR009019 - K homology domain superfamily, prokaryotic type IPR015946 - K homology domain-like, alpha/beta IPR018280 - Ribosomal protein S3, conserved site IPR036419 - Ribosomal protein S3, C-terminal domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6599520.1 40S ribosomal protein S3-1, partial [Cucurbita argyrosperma subsp. sororia]

2.4e-122

97.9

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Query:  MSTQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
        M+TQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
Subjt:  MSTQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA

Query:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
        QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
Subjt:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP

Query:  TTPLPDVVTIHSPKEEEEIVHRP---AAVLTTDIEVPV
        TTPLPDVV IHSPKEEEEIVHRP   AAVLTTDIEVPV
Subjt:  TTPLPDVVTIHSPKEEEEIVHRP---AAVLTTDIEVPV

XP_004141068.1 40S ribosomal protein S3-2 [Cucumis sativus]

9.8e-124

98.73

Show/hide

Query:  MSTQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
        M+TQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
Subjt:  MSTQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA

Query:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
        QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
Subjt:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP

Query:  TTPLPDVVTIHSPKEEEEIVHRPAAVLTTDIEVPVA
        TTPLPDVVTIHSPKEEEEIVHRP AVLT DIEVPVA
Subjt:  TTPLPDVVTIHSPKEEEEIVHRPAAVLTTDIEVPVA

XP_022154712.1 40S ribosomal protein S3-2-like [Momordica charantia]

2.4e-122

98.3

Show/hide

Query:  MSTQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
        MSTQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
Subjt:  MSTQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA

Query:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
        QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
Subjt:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP

Query:  TTPLPDVVTIHSPKEEEEIVHRPAAVLTTDIEVPV
        TTPLPDVVTIHSPKEEEEIVHRP A+L+TDIE+PV
Subjt:  TTPLPDVVTIHSPKEEEEIVHRPAAVLTTDIEVPV

XP_023546322.1 40S ribosomal protein S3-2-like [Cucurbita pepo subsp. pepo]

1.4e-122

98.73

Show/hide

Query:  MSTQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
        M+TQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
Subjt:  MSTQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA

Query:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
        QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
Subjt:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP

Query:  TTPLPDVVTIHSPKEEEEIVHRP-AAVLTTDIEVPV
        TTPLPDVV IHSPKEEEEIVHRP AAVLTTDIEVPV
Subjt:  TTPLPDVVTIHSPKEEEEIVHRP-AAVLTTDIEVPV

XP_038890738.1 40S ribosomal protein S3-2 [Benincasa hispida]

6.8e-125

99.58

Show/hide

Query:  MSTQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
        M+TQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
Subjt:  MSTQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA

Query:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
        QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
Subjt:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP

Query:  TTPLPDVVTIHSPKEEEEIVHRPAAVLTTDIEVPVA
        TTPLPDVVTIHSPKEEEEIVHRPAAVLTTDIEVPVA
Subjt:  TTPLPDVVTIHSPKEEEEIVHRPAAVLTTDIEVPVA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LHQ6 KH type-2 domain-containing protein

4.7e-124

98.73

Show/hide

Query:  MSTQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
        M+TQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
Subjt:  MSTQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA

Query:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
        QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
Subjt:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP

Query:  TTPLPDVVTIHSPKEEEEIVHRPAAVLTTDIEVPVA
        TTPLPDVVTIHSPKEEEEIVHRP AVLT DIEVPVA
Subjt:  TTPLPDVVTIHSPKEEEEIVHRPAAVLTTDIEVPVA

A0A1S3CAV4 40S ribosomal protein S3-2

4.7e-124

98.73

Show/hide

Query:  MSTQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
        M+TQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
Subjt:  MSTQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA

Query:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
        QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
Subjt:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP

Query:  TTPLPDVVTIHSPKEEEEIVHRPAAVLTTDIEVPVA
        TTPLPDVVTIHSPKEEEEIVHRP AVLT DIEVPVA
Subjt:  TTPLPDVVTIHSPKEEEEIVHRPAAVLTTDIEVPVA

A0A6J1DMD4 40S ribosomal protein S3-2-like

1.2e-122

98.3

Show/hide

Query:  MSTQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
        MSTQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
Subjt:  MSTQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA

Query:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
        QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
Subjt:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP

Query:  TTPLPDVVTIHSPKEEEEIVHRPAAVLTTDIEVPV
        TTPLPDVVTIHSPKEEEEIVHRP A+L+TDIE+PV
Subjt:  TTPLPDVVTIHSPKEEEEIVHRPAAVLTTDIEVPV

A0A6J1G4R4 40S ribosomal protein S3-2-like

2.0e-122

97.08

Show/hide

Query:  MSTQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
        M+TQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
Subjt:  MSTQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA

Query:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
        QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
Subjt:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP

Query:  TTPLPDVVTIHSPKEEEEIVHRP-----AAVLTTDIEVPV
        TTPLPDVV IHSPKEEEEIVHRP     AAVLTTDIEVPV
Subjt:  TTPLPDVVTIHSPKEEEEIVHRP-----AAVLTTDIEVPV

A0A6J1KF90 40S ribosomal protein S3-2-like

3.4e-122

97.48

Show/hide

Query:  MSTQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
        M+TQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTS VQKRFKFPENSVELYAEKVNNRGLCAIA
Subjt:  MSTQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA

Query:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
        QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
Subjt:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP

Query:  TTPLPDVVTIHSPKEEEEIVHRP---AAVLTTDIEVPV
        TTPLPDVV IHSPKEEEEIVHRP   AAVLTTDIEVPV
Subjt:  TTPLPDVVTIHSPKEEEEIVHRP---AAVLTTDIEVPV

SwissProt top hits

e value

%identity

Alignment

P02350 40S ribosomal protein S3-A

1.8e-96

84.26

Show/hide

Query:  MSTQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
        M+ Q+SKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRRIRELT+VVQKRF FPE SVELYAEKV  RGLCAIA
Subjt:  MSTQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA

Query:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
        QAESLRYKLLGGLAVRRACYGVLRF+MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PV  Y+D+AVRHVLLRQGVLGIKVKIML WDP GK GP
Subjt:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP

Query:  TTPLPDVVTIHSPKEE
          PLPD V+I  PK+E
Subjt:  TTPLPDVVTIHSPKEE

P47835 40S ribosomal protein S3-B

1.8e-96

84.26

Show/hide

Query:  MSTQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
        M+ QMSKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP +TEIII ATRTQNVLGEKGRRIRELT+VVQKRF FPE SVELYAEKV  RGLCAIA
Subjt:  MSTQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA

Query:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
        QAESLRYKLLGGLAVRRACYGVLRF+MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PV  Y+D+AVRHVLLRQGVLGIKVKIML WDP GK GP
Subjt:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP

Query:  TTPLPDVVTIHSPKEE
          PLPD V+I  PK+E
Subjt:  TTPLPDVVTIHSPKEE

Q9FJA6 40S ribosomal protein S3-3

2.2e-110

86.86

Show/hide

Query:  MSTQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
        M+TQ+SKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTS+VQKRFKFP++SVELYAEKV NRGLCAIA
Subjt:  MSTQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA

Query:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
        QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP ++YID+AVRHVLLRQGVLG+KVKIMLDWDPKGKQGP
Subjt:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP

Query:  TTPLPDVVTIHSPKEEEEIVHRPAAVLTTDIEVPVA
         TPLPDVV IH+PKE++  +  PA V+T    VP A
Subjt:  TTPLPDVVTIHSPKEEEEIVHRPAAVLTTDIEVPVA

Q9M339 40S ribosomal protein S3-2

2.2e-110

90.71

Show/hide

Query:  MSTQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
        M+TQ+SKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTS+VQKRFKFP +SVELYAEKVNNRGLCAIA
Subjt:  MSTQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA

Query:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
        QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP ++YIDSAVRHVLLRQGVLGIKVK+MLDWDPKG  GP
Subjt:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP

Query:  TTPLPDVVTIHSPKEEEEIVHRPAAV
         TPLPDVV IHSPKEEE I + PA V
Subjt:  TTPLPDVVTIHSPKEEEEIVHRPAAV

Q9SIP7 40S ribosomal protein S3-1

2.7e-108

91.2

Show/hide

Query:  MSTQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
        M+TQ+SKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTS+VQKRFKFP +SVELYAEKVNNRGLCAIA
Subjt:  MSTQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA

Query:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
        QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP ++YID+AVRHVLLRQGVLGIKVKIMLDWDP GK GP
Subjt:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP

Query:  TTPLPDVVTIHSPKEE
         TPLPDVV IH+PK++
Subjt:  TTPLPDVVTIHSPKEE

Arabidopsis top hits

e value

%identity

Alignment

AT2G31610.1 Ribosomal protein S3 family protein

1.9e-109

91.2

Show/hide

Query:  MSTQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
        M+TQ+SKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTS+VQKRFKFP +SVELYAEKVNNRGLCAIA
Subjt:  MSTQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA

Query:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
        QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP ++YID+AVRHVLLRQGVLGIKVKIMLDWDP GK GP
Subjt:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP

Query:  TTPLPDVVTIHSPKEE
         TPLPDVV IH+PK++
Subjt:  TTPLPDVVTIHSPKEE

AT3G53870.1 Ribosomal protein S3 family protein

1.6e-111

90.71

Show/hide

Query:  MSTQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
        M+TQ+SKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTS+VQKRFKFP +SVELYAEKVNNRGLCAIA
Subjt:  MSTQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA

Query:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
        QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP ++YIDSAVRHVLLRQGVLGIKVK+MLDWDPKG  GP
Subjt:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP

Query:  TTPLPDVVTIHSPKEEEEIVHRPAAV
         TPLPDVV IHSPKEEE I + PA V
Subjt:  TTPLPDVVTIHSPKEEEEIVHRPAAV

AT5G35530.1 Ribosomal protein S3 family protein

1.6e-111

86.86

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Query:  MSTQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
        M+TQ+SKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTS+VQKRFKFP++SVELYAEKV NRGLCAIA
Subjt:  MSTQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA

Query:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
        QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP ++YID+AVRHVLLRQGVLG+KVKIMLDWDPKGKQGP
Subjt:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP

Query:  TTPLPDVVTIHSPKEEEEIVHRPAAVLTTDIEVPVA
         TPLPDVV IH+PKE++  +  PA V+T    VP A
Subjt:  TTPLPDVVTIHSPKEEEEIVHRPAAVLTTDIEVPVA

Sequences

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CDS sequence

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ATGTCGACCCAGATGAGTAAGAAGAGAAAGTTCGTTGCCGATGGAGTGTTTTTTGCCGAGCTAAACGAGGTTTTGACCAGAGAGTTGGCCGAGGATGGGTACTCCGGTGT
CGAGGTTAGAGTCACTCCCATGCGCACTGAGATCATCATCCGAGCCACCCGCACCCAAAACGTTCTTGGAGAAAAAGGTAGGAGGATTAGGGAACTCACCTCGGTTGTGC
AGAAGCGGTTCAAGTTTCCGGAGAACAGTGTTGAGCTTTATGCCGAGAAAGTTAACAACAGAGGGCTTTGTGCCATTGCCCAAGCCGAATCTCTTCGTTATAAGCTACTT
GGTGGCCTTGCTGTGCGGAGGGCATGCTACGGTGTTTTGAGATTCGTTATGGAAAGTGGAGCAAAGGGTTGTGAGGTGATTGTTAGTGGAAAACTCAGGGCACAGCGTGC
AAAGTCTATGAAGTTCAAAGATGGATATATGATATCTTCGGGTCAGCCAGTCAGAGATTATATTGATTCGGCTGTTAGACATGTTCTTCTCAGACAGGGAGTTCTGGGTA
TCAAAGTTAAGATCATGCTCGATTGGGATCCTAAGGGCAAGCAAGGCCCTACAACCCCTCTTCCTGATGTTGTCACCATCCACTCTCCCAAGGAGGAAGAAGAAATCGTC
CATAGACCAGCAGCAGTTTTGACCACTGATATTGAGGTTCCAGTAGCAGCCCGAGAGGCTTCTCTTTTAGATATTAATGTATGA

mRNA sequence

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AATCTGCCATCCCAATCTCTAACACATGCATGCAGCCGTATAAAGTTCAATCTGCGGCAGCGGCATTTCTTCCACCAGAACGCGCGGAGCACAGAGCCTTACCTTCTCAT
AACTCAGATCTTTTCCGAGCGGCTTCATTGCTCTCTTTACAATCTCTCTTTGAAAATGTCGACCCAGATGAGTAAGAAGAGAAAGTTCGTTGCCGATGGAGTGTTTTTTG
CCGAGCTAAACGAGGTTTTGACCAGAGAGTTGGCCGAGGATGGGTACTCCGGTGTCGAGGTTAGAGTCACTCCCATGCGCACTGAGATCATCATCCGAGCCACCCGCACC
CAAAACGTTCTTGGAGAAAAAGGTAGGAGGATTAGGGAACTCACCTCGGTTGTGCAGAAGCGGTTCAAGTTTCCGGAGAACAGTGTTGAGCTTTATGCCGAGAAAGTTAA
CAACAGAGGGCTTTGTGCCATTGCCCAAGCCGAATCTCTTCGTTATAAGCTACTTGGTGGCCTTGCTGTGCGGAGGGCATGCTACGGTGTTTTGAGATTCGTTATGGAAA
GTGGAGCAAAGGGTTGTGAGGTGATTGTTAGTGGAAAACTCAGGGCACAGCGTGCAAAGTCTATGAAGTTCAAAGATGGATATATGATATCTTCGGGTCAGCCAGTCAGA
GATTATATTGATTCGGCTGTTAGACATGTTCTTCTCAGACAGGGAGTTCTGGGTATCAAAGTTAAGATCATGCTCGATTGGGATCCTAAGGGCAAGCAAGGCCCTACAAC
CCCTCTTCCTGATGTTGTCACCATCCACTCTCCCAAGGAGGAAGAAGAAATCGTCCATAGACCAGCAGCAGTTTTGACCACTGATATTGAGGTTCCAGTAGCAGCCCGAG
AGGCTTCTCTTTTAGATATTAATGTATGAAATCAACGGTCATCATCCACTTTGTATTTTCTGTCCCAAAATTTTATTGAAGCCCCCCATTTATCTGTTGGTTTGAGCCTC
CTGACTTCTGAGGGTTCTTTTTGAAATCAAACAAAATTCTTATGGAGAGAACAGTTTTTATGATGCCTTCGCCCTGTACTGTCCTTTCTTTTTTTACTTAATGATTACTT
ATTTTGGACTCTGTTGAACTGAA

Protein sequence

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MSTQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLL
GGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIV
HRPAAVLTTDIEVPVAAREASLLDINV

Tan0003096 (gene) of Snake gourd v1 genome