; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0003098 (gene) of Snake gourd v1 genome

Gene IDTan0003098
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionClassical arabinogalactan protein 9
Genome locationLG01:14300008..14301052
RNA-Seq ExpressionTan0003098
SyntenyTan0003098
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0053440.1 classical arabinogalactan protein 9 [Cucumis melo var. makuwa]3.6e-4277.51Show/hide
Query:  MKTGFHFLMVFALLATSSMAQAPAGAPAQPPTTPAVPPPSTPPPAASPPPATPPPATPPPATPPP------SQPPSSPPTQPPATPPTSPPPTSPTSSPT
        MK GF F+M  AL ATS MAQAP  APAQPP+TPAVPPPSTPPPAASPPPATPPPATPPPATPPP      S PPSSPP+QPPA+PPTSPPP+SP+S PT
Subjt:  MKTGFHFLMVFALLATSSMAQAPAGAPAQPPTTPAVPPPSTPPPAASPPPATPPPATPPPATPPP------SQPPSSPPTQPPATPPTSPPPTSPTSSPT

Query:  PPPKEGPASSPAPSTASPPSPPSEGNGPVAGPGPSPPPPPPEGNGAATVSRGVMLGGAVAGAFLAMVFA
         PPKEGP S   P T+SPPSPP EGN P   PGPSPPPPPPEGNGAA+VSRG+M+GGAVAGAFLAM+FA
Subjt:  PPPKEGPASSPAPSTASPPSPPSEGNGPVAGPGPSPPPPPPEGNGAATVSRGVMLGGAVAGAFLAMVFA

TYK14854.1 vegetative cell wall protein gp1 [Cucumis melo var. makuwa]1.6e-4277.51Show/hide
Query:  MKTGFHFLMVFALLATSSMAQAPAGAPAQPPTTPAVPPPSTPPPAASPPPATPPPATPPPATPPP------SQPPSSPPTQPPATPPTSPPPTSPTSSPT
        MK GF F+M  AL ATS MAQAP  APAQPP+TPAVPPPSTPPPAASPPPATPPPATPPPATPPP      S PPSSPP+QPPA+PPTSPPP+SP+S PT
Subjt:  MKTGFHFLMVFALLATSSMAQAPAGAPAQPPTTPAVPPPSTPPPAASPPPATPPPATPPPATPPP------SQPPSSPPTQPPATPPTSPPPTSPTSSPT

Query:  PPPKEGPASSPAPSTASPPSPPSEGNGPVAGPGPSPPPPPPEGNGAATVSRGVMLGGAVAGAFLAMVFA
         PPKEGP S   P T+SPPSPP EGN P + PGPSPPPPPPEGNGAA+VSRG+M+GGAVAGAFLAM+FA
Subjt:  PPPKEGPASSPAPSTASPPSPPSEGNGPVAGPGPSPPPPPPEGNGAATVSRGVMLGGAVAGAFLAMVFA

XP_008455676.1 PREDICTED: vegetative cell wall protein gp1 [Cucumis melo]1.8e-4177.71Show/hide
Query:  GFHFLMVFALLATSSMAQAPAGAPAQPPTTPAVPPPSTPPPAASPPPATPPPATPPPATPPP------SQPPSSPPTQPPATPPTSPPPTSPTSSPTPPP
        GF F+M  AL ATS MAQAP  APAQPP+TPAVPPPSTPPPAASPPPATPPPATPPPATPPP      S PPSSPP+QPPA+PPTSPPP+SP+S PT PP
Subjt:  GFHFLMVFALLATSSMAQAPAGAPAQPPTTPAVPPPSTPPPAASPPPATPPPATPPPATPPP------SQPPSSPPTQPPATPPTSPPPTSPTSSPTPPP

Query:  KEGPASSPAPSTASPPSPPSEGNGPVAGPGPSPPPPPPEGNGAATVSRGVMLGGAVAGAFLAMVFA
        KEGP S   P T+SPPSPP EGN P + PGPSPPPPPPEGNGAA+VSRG+M+GGAVAGAFLAM+FA
Subjt:  KEGPASSPAPSTASPPSPPSEGNGPVAGPGPSPPPPPPEGNGAATVSRGVMLGGAVAGAFLAMVFA

XP_022929543.1 classical arabinogalactan protein 9-like [Cucurbita moschata]1.2e-4079.17Show/hide
Query:  MKTGFHFLMVFALLATSSMAQAPAGAPAQPPTTPAVPPPSTPP----PAASPPPATPPPATPPPA-TPPPSQPPSSPPTQPPATPPTSPPPTSPTSSPTP
        MK GF FLMV AL ATSSMAQAP  APAQPPTTPAVPPPSTPP    PA  PP ATPPPATPPPA TPPPSQPPSSPPTQPPA+PPT         SPTP
Subjt:  MKTGFHFLMVFALLATSSMAQAPAGAPAQPPTTPAVPPPSTPP----PAASPPPATPPPATPPPA-TPPPSQPPSSPPTQPPATPPTSPPPTSPTSSPTP

Query:  PPKEGPASSPAPSTASPPSPPSEGNGPVAGPGPSPPPPPPEGNGAATVSRGVMLGGAVAGAFLAMVFA
        PPKEGPASSP PS+ASPPSPPSEG GP A PGP+ PPPPP  NGAATVSRGVM+GGAVAGA LAMVFA
Subjt:  PPKEGPASSPAPSTASPPSPPSEGNGPVAGPGPSPPPPPPEGNGAATVSRGVMLGGAVAGAFLAMVFA

XP_022984561.1 classical arabinogalactan protein 4-like [Cucurbita maxima]2.9e-3977.98Show/hide
Query:  MKTGFHFLMVFALLATSSMAQAPAGAPAQPPTTPAVPPPSTPP----PAASPPPATPPPATPPPA-TPPPSQPPSSPPTQPPATPPTSPPPTSPTSSPTP
        MK GF F+MV AL ATSSMAQAP  APAQPPTTPAVPPPSTPP    PA  PP ATPPPATPPPA TPPPSQPPSSPPTQPPA+PPT         SPTP
Subjt:  MKTGFHFLMVFALLATSSMAQAPAGAPAQPPTTPAVPPPSTPP----PAASPPPATPPPATPPPA-TPPPSQPPSSPPTQPPATPPTSPPPTSPTSSPTP

Query:  PPKEGPASSPAPSTASPPSPPSEGNGPVAGPGPSPPPPPPEGNGAATVSRGVMLGGAVAGAFLAMVFA
        PPKEGPASSP PS+ASPPSPPSEG  P A PGP+ PPPPP  NGAATVSRGVM+GGAVAGA LAMVFA
Subjt:  PPKEGPASSPAPSTASPPSPPSEGNGPVAGPGPSPPPPPPEGNGAATVSRGVMLGGAVAGAFLAMVFA

TrEMBL top hitse value%identityAlignment
A0A0A0L0L1 Uncharacterized protein1.3e-4278.11Show/hide
Query:  MKTGFHFLMVFALLATSSMAQAPAGAPAQPPTTPAVPPPSTPPPAASPPPATPPPATPPPATPPP------SQPPSSPPTQPPATPPTSPPPTSPTSSPT
        MK GF F+M  AL ATS MAQAP  APAQPP+TPAVPPPSTPPPAASPPPATPPPATPPPATPPP      S PPSSPP+QPPA+PPTSPPP+SP+S PT
Subjt:  MKTGFHFLMVFALLATSSMAQAPAGAPAQPPTTPAVPPPSTPPPAASPPPATPPPATPPPATPPP------SQPPSSPPTQPPATPPTSPPPTSPTSSPT

Query:  PPPKEGPASSPAPSTASPPSPPSEGNGPVAGPGPSPPPPPPEGNGAATVSRGVMLGGAVAGAFLAMVFA
         PPKEGP S   P T+SPPSPP EGN P   PGPSPPPPPPEGNGAA+VSRG+M+GGAVAGAFLAMVFA
Subjt:  PPPKEGPASSPAPSTASPPSPPSEGNGPVAGPGPSPPPPPPEGNGAATVSRGVMLGGAVAGAFLAMVFA

A0A1S3C1K1 vegetative cell wall protein gp18.7e-4277.71Show/hide
Query:  GFHFLMVFALLATSSMAQAPAGAPAQPPTTPAVPPPSTPPPAASPPPATPPPATPPPATPPP------SQPPSSPPTQPPATPPTSPPPTSPTSSPTPPP
        GF F+M  AL ATS MAQAP  APAQPP+TPAVPPPSTPPPAASPPPATPPPATPPPATPPP      S PPSSPP+QPPA+PPTSPPP+SP+S PT PP
Subjt:  GFHFLMVFALLATSSMAQAPAGAPAQPPTTPAVPPPSTPPPAASPPPATPPPATPPPATPPP------SQPPSSPPTQPPATPPTSPPPTSPTSSPTPPP

Query:  KEGPASSPAPSTASPPSPPSEGNGPVAGPGPSPPPPPPEGNGAATVSRGVMLGGAVAGAFLAMVFA
        KEGP S   P T+SPPSPP EGN P + PGPSPPPPPPEGNGAA+VSRG+M+GGAVAGAFLAM+FA
Subjt:  KEGPASSPAPSTASPPSPPSEGNGPVAGPGPSPPPPPPEGNGAATVSRGVMLGGAVAGAFLAMVFA

A0A5A7UE17 Classical arabinogalactan protein 91.8e-4277.51Show/hide
Query:  MKTGFHFLMVFALLATSSMAQAPAGAPAQPPTTPAVPPPSTPPPAASPPPATPPPATPPPATPPP------SQPPSSPPTQPPATPPTSPPPTSPTSSPT
        MK GF F+M  AL ATS MAQAP  APAQPP+TPAVPPPSTPPPAASPPPATPPPATPPPATPPP      S PPSSPP+QPPA+PPTSPPP+SP+S PT
Subjt:  MKTGFHFLMVFALLATSSMAQAPAGAPAQPPTTPAVPPPSTPPPAASPPPATPPPATPPPATPPP------SQPPSSPPTQPPATPPTSPPPTSPTSSPT

Query:  PPPKEGPASSPAPSTASPPSPPSEGNGPVAGPGPSPPPPPPEGNGAATVSRGVMLGGAVAGAFLAMVFA
         PPKEGP S   P T+SPPSPP EGN P   PGPSPPPPPPEGNGAA+VSRG+M+GGAVAGAFLAM+FA
Subjt:  PPPKEGPASSPAPSTASPPSPPSEGNGPVAGPGPSPPPPPPEGNGAATVSRGVMLGGAVAGAFLAMVFA

A0A5D3CV77 Vegetative cell wall protein gp17.9e-4377.51Show/hide
Query:  MKTGFHFLMVFALLATSSMAQAPAGAPAQPPTTPAVPPPSTPPPAASPPPATPPPATPPPATPPP------SQPPSSPPTQPPATPPTSPPPTSPTSSPT
        MK GF F+M  AL ATS MAQAP  APAQPP+TPAVPPPSTPPPAASPPPATPPPATPPPATPPP      S PPSSPP+QPPA+PPTSPPP+SP+S PT
Subjt:  MKTGFHFLMVFALLATSSMAQAPAGAPAQPPTTPAVPPPSTPPPAASPPPATPPPATPPPATPPP------SQPPSSPPTQPPATPPTSPPPTSPTSSPT

Query:  PPPKEGPASSPAPSTASPPSPPSEGNGPVAGPGPSPPPPPPEGNGAATVSRGVMLGGAVAGAFLAMVFA
         PPKEGP S   P T+SPPSPP EGN P + PGPSPPPPPPEGNGAA+VSRG+M+GGAVAGAFLAM+FA
Subjt:  PPPKEGPASSPAPSTASPPSPPSEGNGPVAGPGPSPPPPPPEGNGAATVSRGVMLGGAVAGAFLAMVFA

A0A6J1ESF0 classical arabinogalactan protein 9-like5.7e-4179.17Show/hide
Query:  MKTGFHFLMVFALLATSSMAQAPAGAPAQPPTTPAVPPPSTPP----PAASPPPATPPPATPPPA-TPPPSQPPSSPPTQPPATPPTSPPPTSPTSSPTP
        MK GF FLMV AL ATSSMAQAP  APAQPPTTPAVPPPSTPP    PA  PP ATPPPATPPPA TPPPSQPPSSPPTQPPA+PPT         SPTP
Subjt:  MKTGFHFLMVFALLATSSMAQAPAGAPAQPPTTPAVPPPSTPP----PAASPPPATPPPATPPPA-TPPPSQPPSSPPTQPPATPPTSPPPTSPTSSPTP

Query:  PPKEGPASSPAPSTASPPSPPSEGNGPVAGPGPSPPPPPPEGNGAATVSRGVMLGGAVAGAFLAMVFA
        PPKEGPASSP PS+ASPPSPPSEG GP A PGP+ PPPPP  NGAATVSRGVM+GGAVAGA LAMVFA
Subjt:  PPKEGPASSPAPSTASPPSPPSEGNGPVAGPGPSPPPPPPEGNGAATVSRGVMLGGAVAGAFLAMVFA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGACGGGTTTTCATTTTCTGATGGTTTTCGCCTTATTGGCTACTTCCTCTATGGCTCAGGCTCCCGCTGGTGCTCCGGCTCAGCCACCCACCACCCCCGCCGTTCC
CCCGCCGTCTACTCCTCCGCCGGCCGCCTCCCCACCTCCCGCCACCCCTCCTCCTGCTACCCCTCCACCGGCCACCCCACCTCCGAGCCAACCACCATCATCCCCACCGA
CCCAACCTCCAGCCACACCTCCTACATCTCCGCCGCCGACATCCCCGACCTCCTCTCCGACTCCACCACCAAAGGAGGGTCCGGCCTCATCTCCGGCTCCATCCACCGCC
TCGCCGCCGTCGCCACCATCGGAAGGAAATGGCCCCGTCGCCGGCCCTGGACCCAGCCCGCCACCACCCCCACCGGAAGGAAATGGCGCAGCCACCGTTAGCCGAGGAGT
CATGCTCGGCGGTGCTGTGGCCGGAGCTTTCTTGGCAATGGTATTTGCTTAG
mRNA sequenceShow/hide mRNA sequence
TTGGGGAAAGACAAGGCAAGGCTGTCCTCTTTTCTTCTTCTTTTTCTTCTTTACTCTCTTTCTTCTTGTTTTATATATATATATATCTCTGCTATTGCTTTTCATTTCAA
CTTCCCACTCATACTTTCTCTAATTTTCTCTCTCTAAAAGCTTTTTTTCTCTCTCTTCTGAAATTTTCTCTCTCTATCTTTTGTTTGGTAGAGAGAATGAAGACGGGTTT
TCATTTTCTGATGGTTTTCGCCTTATTGGCTACTTCCTCTATGGCTCAGGCTCCCGCTGGTGCTCCGGCTCAGCCACCCACCACCCCCGCCGTTCCCCCGCCGTCTACTC
CTCCGCCGGCCGCCTCCCCACCTCCCGCCACCCCTCCTCCTGCTACCCCTCCACCGGCCACCCCACCTCCGAGCCAACCACCATCATCCCCACCGACCCAACCTCCAGCC
ACACCTCCTACATCTCCGCCGCCGACATCCCCGACCTCCTCTCCGACTCCACCACCAAAGGAGGGTCCGGCCTCATCTCCGGCTCCATCCACCGCCTCGCCGCCGTCGCC
ACCATCGGAAGGAAATGGCCCCGTCGCCGGCCCTGGACCCAGCCCGCCACCACCCCCACCGGAAGGAAATGGCGCAGCCACCGTTAGCCGAGGAGTCATGCTCGGCGGTG
CTGTGGCCGGAGCTTTCTTGGCAATGGTATTTGCTTAGACGGATTTGTTGACGGAATCGAGATTCCGAAACAACAGGGTGGGTCGGTCGGCCGGCCGGCGGTGGATCTTT
GGAATATTTGATGGCTGGGAGGTTTAAGATCCATTTTGGTGTTTGTTTAATTTAAATTTCACATTTCTGTAGCGTTTTTCCTTTTTTAAAAAATTTATTTCCATATTTGT
GTATGTTTCTGCGCTGGTTTGATAGGTGGAATTTGGAGTTTGATTATTGTTTCTTCGGTGATTCATTATTTTTAAATGTGTGGGACACGTGGCTATTGTAGATGAATATT
GTCGTGTACATCGGATTATTCAATAAAGATAGATTTCCATTCTTTCCCTTTCTAA
Protein sequenceShow/hide protein sequence
MKTGFHFLMVFALLATSSMAQAPAGAPAQPPTTPAVPPPSTPPPAASPPPATPPPATPPPATPPPSQPPSSPPTQPPATPPTSPPPTSPTSSPTPPPKEGPASSPAPSTA
SPPSPPSEGNGPVAGPGPSPPPPPPEGNGAATVSRGVMLGGAVAGAFLAMVFA