; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0003106 (gene) of Snake gourd v1 genome

Gene IDTan0003106
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionTransposase
Genome locationLG03:49765396..49766696
RNA-Seq ExpressionTan0003106
SyntenyTan0003106
Gene Ontology termsGO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK01009.1 transposase [Cucumis melo var. makuwa]1.0e-6552.52Show/hide
Query:  SPNDILTQALGTPEYSGRVRGASGFVTPTTYFHTVKRSSKQDENKNKEIVHENEALRRRVRELEDQIQKTRSTPTSEHGSCSKQFLQD-----ENEYRDK
        SPND LTQALGTPEY GRVRG  GF+TPT YFH  K       +  ++I+ ENEALR+R+RELE   QK +S PTSEHGSCSK  +Q+     EN  ++K
Subjt:  SPNDILTQALGTPEYSGRVRGASGFVTPTTYFHTVKRSSKQDENKNKEIVHENEALRRRVRELEDQIQKTRSTPTSEHGSCSKQFLQD-----ENEYRDK

Query:  R----KSKKVNVEVYLNFVRSQDLED---------IKDECLISYICDKEV-VGLPQANLPISLRSILRFAEKVMDSQTSISYQLPASLYGISRKSYILRE
        +        V++      V  +++++          K+E   S    KEV V    +NLPI L+ ILR+AE+VM   +S S+QLP  L+GISRKSY+LRE
Subjt:  R----KSKKVNVEVYLNFVRSQDLED---------IKDECLISYICDKEV-VGLPQANLPISLRSILRFAEKVMDSQTSISYQLPASLYGISRKSYILRE

Query:  DIIDFCGMQQVNTLSMVAYMMYLYSYFVESKQVSHYIFVDPSILSGRQNTAEIRARNLCSRLMVSEENQLIVAPYNPG
        D+IDFC MQ+V TLSMVAY+ YLYS  ++ K+VS Y+FVDPS++S   +T EIRARNLCSRLM S+++QL+VAPYNPG
Subjt:  DIIDFCGMQQVNTLSMVAYMMYLYSYFVESKQVSHYIFVDPSILSGRQNTAEIRARNLCSRLMVSEENQLIVAPYNPG

TYK18940.1 transposase [Cucumis melo var. makuwa]1.0e-6552.52Show/hide
Query:  SPNDILTQALGTPEYSGRVRGASGFVTPTTYFHTVKRSSKQDENKNKEIVHENEALRRRVRELEDQIQKTRSTPTSEHGSCSKQFLQD-----ENEYRDK
        SPND LTQALGTPEY GRVRG  GF+TPT YFH  K       +  ++I+ ENEALR+R+RELE   QK +S PTSEHGSCSK  +Q+     EN  ++K
Subjt:  SPNDILTQALGTPEYSGRVRGASGFVTPTTYFHTVKRSSKQDENKNKEIVHENEALRRRVRELEDQIQKTRSTPTSEHGSCSKQFLQD-----ENEYRDK

Query:  R----KSKKVNVEVYLNFVRSQDLED---------IKDECLISYICDKEV-VGLPQANLPISLRSILRFAEKVMDSQTSISYQLPASLYGISRKSYILRE
        +        V++      V  +++++          K+E   S    KEV V    +NLPI L+ ILR+AE+VM   +S S+QLP  L+GISRKSY+LRE
Subjt:  R----KSKKVNVEVYLNFVRSQDLED---------IKDECLISYICDKEV-VGLPQANLPISLRSILRFAEKVMDSQTSISYQLPASLYGISRKSYILRE

Query:  DIIDFCGMQQVNTLSMVAYMMYLYSYFVESKQVSHYIFVDPSILSGRQNTAEIRARNLCSRLMVSEENQLIVAPYNPG
        D+IDFC MQ+V TLSMVAY+ YLYS  ++ K+VS Y+FVDPS++S   +T EIRARNLCSRLM S+++QL+VAPYNPG
Subjt:  DIIDFCGMQQVNTLSMVAYMMYLYSYFVESKQVSHYIFVDPSILSGRQNTAEIRARNLCSRLMVSEENQLIVAPYNPG

TYK22670.1 transposase [Cucumis melo var. makuwa]1.0e-6552.52Show/hide
Query:  SPNDILTQALGTPEYSGRVRGASGFVTPTTYFHTVKRSSKQDENKNKEIVHENEALRRRVRELEDQIQKTRSTPTSEHGSCSKQFLQD-----ENEYRDK
        SPND LTQALGTPEY GRVRG  GF+TPT YFH  K       +  ++I+ ENEALR+R+RELE   QK +S PTSEHGSCSK  +Q+     EN  ++K
Subjt:  SPNDILTQALGTPEYSGRVRGASGFVTPTTYFHTVKRSSKQDENKNKEIVHENEALRRRVRELEDQIQKTRSTPTSEHGSCSKQFLQD-----ENEYRDK

Query:  R----KSKKVNVEVYLNFVRSQDLED---------IKDECLISYICDKEV-VGLPQANLPISLRSILRFAEKVMDSQTSISYQLPASLYGISRKSYILRE
        +        V++      V  +++++          K+E   S    KEV V    +NLPI L+ ILR+AE+VM   +S S+QLP  L+GISRKSY+LRE
Subjt:  R----KSKKVNVEVYLNFVRSQDLED---------IKDECLISYICDKEV-VGLPQANLPISLRSILRFAEKVMDSQTSISYQLPASLYGISRKSYILRE

Query:  DIIDFCGMQQVNTLSMVAYMMYLYSYFVESKQVSHYIFVDPSILSGRQNTAEIRARNLCSRLMVSEENQLIVAPYNPG
        D+IDFC MQ+V TLSMVAY+ YLYS  ++ K+VS Y+FVDPS++S   +T EIRARNLCSRLM S+++QL+VAPYNPG
Subjt:  DIIDFCGMQQVNTLSMVAYMMYLYSYFVESKQVSHYIFVDPSILSGRQNTAEIRARNLCSRLMVSEENQLIVAPYNPG

TYK22869.1 hypothetical protein E5676_scaffold334G00040 [Cucumis melo var. makuwa]7.8e-6652.52Show/hide
Query:  SPNDILTQALGTPEYSGRVRGASGFVTPTTYFHTVKRSSKQDENKNKEIVHENEALRRRVRELEDQIQKTRSTPTSEHGSCSKQFLQD-----ENEYRDK
        SPND LTQALGTPEY GRVRG  GF+TPT YFH  K    +  +  ++I+ ENEALR+R+RELE   QK +S PTSEHGSCSK  +Q+     EN  ++K
Subjt:  SPNDILTQALGTPEYSGRVRGASGFVTPTTYFHTVKRSSKQDENKNKEIVHENEALRRRVRELEDQIQKTRSTPTSEHGSCSKQFLQD-----ENEYRDK

Query:  R----KSKKVNVEVYLNFVRSQDLED---------IKDECLISYICDKEV-VGLPQANLPISLRSILRFAEKVMDSQTSISYQLPASLYGISRKSYILRE
        +        V++      V  +++++          K+E   S    KEV V    +NLPI L+ ILR+AE+VM   +S S+QLP  L+GISRKSY+LRE
Subjt:  R----KSKKVNVEVYLNFVRSQDLED---------IKDECLISYICDKEV-VGLPQANLPISLRSILRFAEKVMDSQTSISYQLPASLYGISRKSYILRE

Query:  DIIDFCGMQQVNTLSMVAYMMYLYSYFVESKQVSHYIFVDPSILSGRQNTAEIRARNLCSRLMVSEENQLIVAPYNPG
        D+IDFC MQ+V TLSMVAY+ YLYS  ++ K+VS Y+FVDPS++S   +T EIRARNLCSRLM S+++QL+VAPYNPG
Subjt:  DIIDFCGMQQVNTLSMVAYMMYLYSYFVESKQVSHYIFVDPSILSGRQNTAEIRARNLCSRLMVSEENQLIVAPYNPG

TYK24859.1 transposase [Cucumis melo var. makuwa]3.0e-6552.16Show/hide
Query:  SPNDILTQALGTPEYSGRVRGASGFVTPTTYFHTVKRSSKQDENKNKEIVHENEALRRRVRELEDQIQKTRSTPTSEHGSCSKQFLQD-----ENEYRDK
        SPND LTQALGTPEY GRVRG  GF+TPT YFH  K       +  ++I+ ENEALR+R+RELE   QK +S PTSEHGSCSK  +Q+     EN  ++K
Subjt:  SPNDILTQALGTPEYSGRVRGASGFVTPTTYFHTVKRSSKQDENKNKEIVHENEALRRRVRELEDQIQKTRSTPTSEHGSCSKQFLQD-----ENEYRDK

Query:  R----KSKKVNVEVYLNFVRSQDLED---------IKDECLISYICDKEV-VGLPQANLPISLRSILRFAEKVMDSQTSISYQLPASLYGISRKSYILRE
        +        V++      V  +++++          K+E   S    KEV V    +NLPI L+ ILR+AE+VM   +S S+QLP  L+GISRKSY+LRE
Subjt:  R----KSKKVNVEVYLNFVRSQDLED---------IKDECLISYICDKEV-VGLPQANLPISLRSILRFAEKVMDSQTSISYQLPASLYGISRKSYILRE

Query:  DIIDFCGMQQVNTLSMVAYMMYLYSYFVESKQVSHYIFVDPSILSGRQNTAEIRARNLCSRLMVSEENQLIVAPYNPG
        D+IDFC MQ+V TLSMVAY+ YLYS  ++ K+VS Y+FVDPS++S   +T EIRA+NLCSRLM S+++QL+VAPYNPG
Subjt:  DIIDFCGMQQVNTLSMVAYMMYLYSYFVESKQVSHYIFVDPSILSGRQNTAEIRARNLCSRLMVSEENQLIVAPYNPG

TrEMBL top hitse value%identityAlignment
A0A5A7V263 Uncharacterized protein1.4e-6551.44Show/hide
Query:  SPNDILTQALGTPEYSGRVRGASGFVTPTTYFHTVKRSSKQDENKNKEIVHENEALRRRVRELEDQIQKTRSTPTSEHGSCSKQFLQDENEYRDKRKSKK
        SPND LTQALGTPEY GRVRG  GF+TPT YFH  K       +  ++I+ ENE LR+R+RELE   QK +S PTSEHGSCSK  +Q++ ++ +    +K
Subjt:  SPNDILTQALGTPEYSGRVRGASGFVTPTTYFHTVKRSSKQDENKNKEIVHENEALRRRVRELEDQIQKTRSTPTSEHGSCSKQFLQDENEYRDKRKSKK

Query:  VNVEVYLNFV------RSQDLEDIKDECLI------------SYICDKEV-VGLPQANLPISLRSILRFAEKVMDSQTSISYQLPASLYGISRKSYILRE
          +   +  V      +  + E++K+E +I            S    KEV V    +NLPI L+ ILR+AE+VM   +S S+QLP  L+GISRKSY+LRE
Subjt:  VNVEVYLNFV------RSQDLEDIKDECLI------------SYICDKEV-VGLPQANLPISLRSILRFAEKVMDSQTSISYQLPASLYGISRKSYILRE

Query:  DIIDFCGMQQVNTLSMVAYMMYLYSYFVESKQVSHYIFVDPSILSGRQNTAEIRARNLCSRLMVSEENQLIVAPYNPG
        D+IDFC MQ+V TLSMVAY+ YLYS  ++ K+VS Y+FVDPS++S   +T EIRA+NLCSRLM S+++QL+VAPYNPG
Subjt:  DIIDFCGMQQVNTLSMVAYMMYLYSYFVESKQVSHYIFVDPSILSGRQNTAEIRARNLCSRLMVSEENQLIVAPYNPG

A0A5D3BSE4 Transposase4.9e-6652.52Show/hide
Query:  SPNDILTQALGTPEYSGRVRGASGFVTPTTYFHTVKRSSKQDENKNKEIVHENEALRRRVRELEDQIQKTRSTPTSEHGSCSKQFLQD-----ENEYRDK
        SPND LTQALGTPEY GRVRG  GF+TPT YFH  K       +  ++I+ ENEALR+R+RELE   QK +S PTSEHGSCSK  +Q+     EN  ++K
Subjt:  SPNDILTQALGTPEYSGRVRGASGFVTPTTYFHTVKRSSKQDENKNKEIVHENEALRRRVRELEDQIQKTRSTPTSEHGSCSKQFLQD-----ENEYRDK

Query:  R----KSKKVNVEVYLNFVRSQDLED---------IKDECLISYICDKEV-VGLPQANLPISLRSILRFAEKVMDSQTSISYQLPASLYGISRKSYILRE
        +        V++      V  +++++          K+E   S    KEV V    +NLPI L+ ILR+AE+VM   +S S+QLP  L+GISRKSY+LRE
Subjt:  R----KSKKVNVEVYLNFVRSQDLED---------IKDECLISYICDKEV-VGLPQANLPISLRSILRFAEKVMDSQTSISYQLPASLYGISRKSYILRE

Query:  DIIDFCGMQQVNTLSMVAYMMYLYSYFVESKQVSHYIFVDPSILSGRQNTAEIRARNLCSRLMVSEENQLIVAPYNPG
        D+IDFC MQ+V TLSMVAY+ YLYS  ++ K+VS Y+FVDPS++S   +T EIRARNLCSRLM S+++QL+VAPYNPG
Subjt:  DIIDFCGMQQVNTLSMVAYMMYLYSYFVESKQVSHYIFVDPSILSGRQNTAEIRARNLCSRLMVSEENQLIVAPYNPG

A0A5D3D5Z2 Transposase4.9e-6652.52Show/hide
Query:  SPNDILTQALGTPEYSGRVRGASGFVTPTTYFHTVKRSSKQDENKNKEIVHENEALRRRVRELEDQIQKTRSTPTSEHGSCSKQFLQD-----ENEYRDK
        SPND LTQALGTPEY GRVRG  GF+TPT YFH  K       +  ++I+ ENEALR+R+RELE   QK +S PTSEHGSCSK  +Q+     EN  ++K
Subjt:  SPNDILTQALGTPEYSGRVRGASGFVTPTTYFHTVKRSSKQDENKNKEIVHENEALRRRVRELEDQIQKTRSTPTSEHGSCSKQFLQD-----ENEYRDK

Query:  R----KSKKVNVEVYLNFVRSQDLED---------IKDECLISYICDKEV-VGLPQANLPISLRSILRFAEKVMDSQTSISYQLPASLYGISRKSYILRE
        +        V++      V  +++++          K+E   S    KEV V    +NLPI L+ ILR+AE+VM   +S S+QLP  L+GISRKSY+LRE
Subjt:  R----KSKKVNVEVYLNFVRSQDLED---------IKDECLISYICDKEV-VGLPQANLPISLRSILRFAEKVMDSQTSISYQLPASLYGISRKSYILRE

Query:  DIIDFCGMQQVNTLSMVAYMMYLYSYFVESKQVSHYIFVDPSILSGRQNTAEIRARNLCSRLMVSEENQLIVAPYNPG
        D+IDFC MQ+V TLSMVAY+ YLYS  ++ K+VS Y+FVDPS++S   +T EIRARNLCSRLM S+++QL+VAPYNPG
Subjt:  DIIDFCGMQQVNTLSMVAYMMYLYSYFVESKQVSHYIFVDPSILSGRQNTAEIRARNLCSRLMVSEENQLIVAPYNPG

A0A5D3DH49 Transposase4.9e-6652.52Show/hide
Query:  SPNDILTQALGTPEYSGRVRGASGFVTPTTYFHTVKRSSKQDENKNKEIVHENEALRRRVRELEDQIQKTRSTPTSEHGSCSKQFLQD-----ENEYRDK
        SPND LTQALGTPEY GRVRG  GF+TPT YFH  K       +  ++I+ ENEALR+R+RELE   QK +S PTSEHGSCSK  +Q+     EN  ++K
Subjt:  SPNDILTQALGTPEYSGRVRGASGFVTPTTYFHTVKRSSKQDENKNKEIVHENEALRRRVRELEDQIQKTRSTPTSEHGSCSKQFLQD-----ENEYRDK

Query:  R----KSKKVNVEVYLNFVRSQDLED---------IKDECLISYICDKEV-VGLPQANLPISLRSILRFAEKVMDSQTSISYQLPASLYGISRKSYILRE
        +        V++      V  +++++          K+E   S    KEV V    +NLPI L+ ILR+AE+VM   +S S+QLP  L+GISRKSY+LRE
Subjt:  R----KSKKVNVEVYLNFVRSQDLED---------IKDECLISYICDKEV-VGLPQANLPISLRSILRFAEKVMDSQTSISYQLPASLYGISRKSYILRE

Query:  DIIDFCGMQQVNTLSMVAYMMYLYSYFVESKQVSHYIFVDPSILSGRQNTAEIRARNLCSRLMVSEENQLIVAPYNPG
        D+IDFC MQ+V TLSMVAY+ YLYS  ++ K+VS Y+FVDPS++S   +T EIRARNLCSRLM S+++QL+VAPYNPG
Subjt:  DIIDFCGMQQVNTLSMVAYMMYLYSYFVESKQVSHYIFVDPSILSGRQNTAEIRARNLCSRLMVSEENQLIVAPYNPG

A0A5D3DHZ4 ULP_PROTEASE domain-containing protein3.8e-6652.52Show/hide
Query:  SPNDILTQALGTPEYSGRVRGASGFVTPTTYFHTVKRSSKQDENKNKEIVHENEALRRRVRELEDQIQKTRSTPTSEHGSCSKQFLQD-----ENEYRDK
        SPND LTQALGTPEY GRVRG  GF+TPT YFH  K    +  +  ++I+ ENEALR+R+RELE   QK +S PTSEHGSCSK  +Q+     EN  ++K
Subjt:  SPNDILTQALGTPEYSGRVRGASGFVTPTTYFHTVKRSSKQDENKNKEIVHENEALRRRVRELEDQIQKTRSTPTSEHGSCSKQFLQD-----ENEYRDK

Query:  R----KSKKVNVEVYLNFVRSQDLED---------IKDECLISYICDKEV-VGLPQANLPISLRSILRFAEKVMDSQTSISYQLPASLYGISRKSYILRE
        +        V++      V  +++++          K+E   S    KEV V    +NLPI L+ ILR+AE+VM   +S S+QLP  L+GISRKSY+LRE
Subjt:  R----KSKKVNVEVYLNFVRSQDLED---------IKDECLISYICDKEV-VGLPQANLPISLRSILRFAEKVMDSQTSISYQLPASLYGISRKSYILRE

Query:  DIIDFCGMQQVNTLSMVAYMMYLYSYFVESKQVSHYIFVDPSILSGRQNTAEIRARNLCSRLMVSEENQLIVAPYNPG
        D+IDFC MQ+V TLSMVAY+ YLYS  ++ K+VS Y+FVDPS++S   +T EIRARNLCSRLM S+++QL+VAPYNPG
Subjt:  DIIDFCGMQQVNTLSMVAYMMYLYSYFVESKQVSHYIFVDPSILSGRQNTAEIRARNLCSRLMVSEENQLIVAPYNPG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCCCCTCTCCAAATGATATTTTAACTCAAGCTTTGGGCACCCCGGAATACAGTGGACGTGTACGTGGGGCTAGTGGCTTCGTCACACCTACAACTTACTTCCACAC
GGTGAAACGTAGTTCGAAACAAGATGAGAATAAAAACAAAGAAATTGTTCATGAGAATGAAGCACTTCGTCGGCGTGTTAGAGAATTGGAAGATCAAATTCAGAAGACAC
GATCTACACCGACATCGGAACATGGAAGTTGCTCCAAGCAATTTTTGCAAGATGAGAATGAATATCGAGATAAACGGAAATCAAAAAAGGTAAATGTAGAAGTTTATCTA
AACTTTGTACGTAGTCAAGATTTGGAGGACATCAAGGATGAATGTCTTATATCTTATATTTGTGACAAAGAAGTTGTTGGTCTACCACAAGCTAATTTGCCAATATCTTT
GAGGTCTATTCTTAGATTTGCTGAAAAGGTAATGGACAGTCAAACGAGTATTTCCTATCAACTGCCTGCTAGTCTTTATGGAATAAGTCGAAAGAGTTATATTTTGCGTG
AAGATATAATTGACTTTTGCGGTATGCAACAAGTTAACACATTATCGATGGTGGCTTACATGATGTACTTATACTCATACTTTGTTGAGTCAAAGCAAGTTTCACACTAT
ATTTTTGTAGACCCATCTATTTTATCTGGTCGACAAAACACTGCAGAAATTAGAGCTCGCAATCTTTGTAGTAGACTTATGGTGTCCGAGGAAAATCAATTAATTGTTGC
TCCTTATAACCCAGGGTACGTGAAGTTTTACTCACTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTGCCCCTCTCCAAATGATATTTTAACTCAAGCTTTGGGCACCCCGGAATACAGTGGACGTGTACGTGGGGCTAGTGGCTTCGTCACACCTACAACTTACTTCCACAC
GGTGAAACGTAGTTCGAAACAAGATGAGAATAAAAACAAAGAAATTGTTCATGAGAATGAAGCACTTCGTCGGCGTGTTAGAGAATTGGAAGATCAAATTCAGAAGACAC
GATCTACACCGACATCGGAACATGGAAGTTGCTCCAAGCAATTTTTGCAAGATGAGAATGAATATCGAGATAAACGGAAATCAAAAAAGGTAAATGTAGAAGTTTATCTA
AACTTTGTACGTAGTCAAGATTTGGAGGACATCAAGGATGAATGTCTTATATCTTATATTTGTGACAAAGAAGTTGTTGGTCTACCACAAGCTAATTTGCCAATATCTTT
GAGGTCTATTCTTAGATTTGCTGAAAAGGTAATGGACAGTCAAACGAGTATTTCCTATCAACTGCCTGCTAGTCTTTATGGAATAAGTCGAAAGAGTTATATTTTGCGTG
AAGATATAATTGACTTTTGCGGTATGCAACAAGTTAACACATTATCGATGGTGGCTTACATGATGTACTTATACTCATACTTTGTTGAGTCAAAGCAAGTTTCACACTAT
ATTTTTGTAGACCCATCTATTTTATCTGGTCGACAAAACACTGCAGAAATTAGAGCTCGCAATCTTTGTAGTAGACTTATGGTGTCCGAGGAAAATCAATTAATTGTTGC
TCCTTATAACCCAGGGTACGTGAAGTTTTACTCACTTTAA
Protein sequenceShow/hide protein sequence
MCPSPNDILTQALGTPEYSGRVRGASGFVTPTTYFHTVKRSSKQDENKNKEIVHENEALRRRVRELEDQIQKTRSTPTSEHGSCSKQFLQDENEYRDKRKSKKVNVEVYL
NFVRSQDLEDIKDECLISYICDKEVVGLPQANLPISLRSILRFAEKVMDSQTSISYQLPASLYGISRKSYILREDIIDFCGMQQVNTLSMVAYMMYLYSYFVESKQVSHY
IFVDPSILSGRQNTAEIRARNLCSRLMVSEENQLIVAPYNPGYVKFYSL