CuGenDBv2

Gene ID	Tan0003110
Organism	Trichosanthes anguina (Snake gourd v1)
Description	upstream activation factor subunit UAF30-like
Genome location	LG07:26033696..26057780
RNA-Seq Expression	Tan0003110
Synteny	Tan0003110
Gene Ontology terms	GO:0005634 - nucleus (cellular component)
InterPro domains	IPR003121 - SWIB/MDM2 domain IPR014876 - DEK, C-terminal IPR019835 - SWIB domain IPR036885 - SWIB/MDM2 domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022928098.1 upstream activation factor subunit UAF30-like [Cucurbita moschata]

3.1e-152

89.71

Show/hide

Query:  MVSDSELIGRLREFLRNSDLNTTTTAIVRRKLEEDFGVDLSDKKRFIREQVDLFLQTEHERAGEEDGGDCEEVDQEDGDENLKTEEEEGDSEDGYNDDDD
        MVSDSELI RLREFLR+SDLN TTTAIVRRKLEE FGVDLSDKKRFIREQVDLFLQTEHER  EE GGDCEE DQEDGDENLKTEEE+GDSEDG NDD D
Subjt:  MVSDSELIGRLREFLRNSDLNTTTTAIVRRKLEEDFGVDLSDKKRFIREQVDLFLQTEHERAGEEDGGDCEEVDQEDGDENLKTEEEEGDSEDGYNDDDD

Query:  DAKSKTGSNDLGKEVKKRGGGGFTKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPL
        D K KTGSN L    KKRGGGGF+KLCSLSPQLQEFIGVPEMARTEVVKQLWNHIR  NLQDPSNRRNILCDE LKALF V+SINMFQMNKALSKHIWPL
Subjt:  DAKSKTGSNDLGKEVKKRGGGGFTKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPL

Query:  ESNDVIPAKSSQKEKQQKEKQQKEKQQKEKPQKKQRQKQGKEEDSDDSGREEKRQKKGKSGFLAPLQLSDALVTFLGTGENALPRSEVVKRMWDYIKQNN
        ESNDVIPAKSSQKEKQQKEKQ+KEKQ KEKPQKK RQKQGKEEDSDDS REEKRQKKGKSGFLAPLQLSDALVTFLGTGE+AL RS+VVKRMWDYIKQNN
Subjt:  ESNDVIPAKSSQKEKQQKEKQQKEKQQKEKPQKKQRQKQGKEEDSDDSGREEKRQKKGKSGFLAPLQLSDALVTFLGTGENALPRSEVVKRMWDYIKQNN

Query:  LQDPSDKRRIISDEKLKELFDVDSFNGFTVSKLLATHFVK
        LQDPSDKRR+I DEKLKELFDV+SF+GFTVSKLLATHFVK
Subjt:  LQDPSDKRRIISDEKLKELFDVDSFNGFTVSKLLATHFVK

XP_022947277.1 upstream activation factor subunit UAF30-like isoform X1 [Cucurbita moschata]

3.4e-151

87.76

Show/hide

Query:  MVSDSELIGRLREFLRNSDLNTTTTAIVRRKLEEDFGVDLSDKKRFIREQVDLFLQTEHERAGEEDGGDCEEVDQEDGDENLKTEEEEGDSEDGYNDDDD
        MVSDSELI RLRE LRNSDLNTTTTAIVRRKLEEDF +DLSDKK+FIREQVDLFL TEH+R  EEDGGDC EVDQEDGD+N K EEE+GDS DG N +DD
Subjt:  MVSDSELIGRLREFLRNSDLNTTTTAIVRRKLEEDFGVDLSDKKRFIREQVDLFLQTEHERAGEEDGGDCEEVDQEDGDENLKTEEEEGDSEDGYNDDDD

Query:  DAKSKTGSNDLGKEVKKRGGGGFTKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPL
        D KSKTGSN+LGKEVKKR GGGF+KLCSLSPQLQEFIGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEP KALFGVNSI+MFQMNKALSKHIWPL
Subjt:  DAKSKTGSNDLGKEVKKRGGGGFTKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPL

Query:  ESNDVIPAKSSQKEKQQKEKQQKEKQQKEKPQKKQRQKQGKEEDSDDSGREEKRQKKGKSGFLAPLQLSDALVTFLGTGENALPRSEVVKRMWDYIKQNN
        ESNDV PAKSS          QKEKQQKEKPQKK+R+KQGKEEDSDDS RE KRQKKGKSGFLAPLQLSDALVTFLGTGENAL RSEVVKRMWDY+KQNN
Subjt:  ESNDVIPAKSSQKEKQQKEKQQKEKQQKEKPQKKQRQKQGKEEDSDDSGREEKRQKKGKSGFLAPLQLSDALVTFLGTGENALPRSEVVKRMWDYIKQNN

Query:  LQDPSDKRRIISDEKLKELFDVDSFNGFTVSKLLATHFVKKTK
        LQDPSDKRRII DEKLKELFDVDSFNGFTVSKLLATHFVKKTK
Subjt:  LQDPSDKRRIISDEKLKELFDVDSFNGFTVSKLLATHFVKKTK

XP_023007205.1 upstream activation factor subunit UAF30-like isoform X1 [Cucurbita maxima]

1.8e-152

87.76

Show/hide

Query:  MVSDSELIGRLREFLRNSDLNTTTTAIVRRKLEEDFGVDLSDKKRFIREQVDLFLQTEHERAGEEDGGDCEEVDQEDGDENLKTEEEEGDSEDGYNDDDD
        MVSDSELI RLRE LRNSDLNTTTTAIVRRKLEED+ +DLSDKK+FIREQVDLFL TEH+R  EEDGG C+EVDQEDGD+N K EEE+G SEDG N DDD
Subjt:  MVSDSELIGRLREFLRNSDLNTTTTAIVRRKLEEDFGVDLSDKKRFIREQVDLFLQTEHERAGEEDGGDCEEVDQEDGDENLKTEEEEGDSEDGYNDDDD

Query:  DAKSKTGSNDLGKEVKKRGGGGFTKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPL
        D KSKTGSN++GKEVKKR GGGF+KLCSLSPQLQEFIGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPL
Subjt:  DAKSKTGSNDLGKEVKKRGGGGFTKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPL

Query:  ESNDVIPAKSSQKEKQQKEKQQKEKQQKEKPQKKQRQKQGKEEDSDDSGREEKRQKKGKSGFLAPLQLSDALVTFLGTGENALPRSEVVKRMWDYIKQNN
        ESNDV PAKSS          QKEKQQKEKPQKK+R+KQGKEEDSD S RE KRQKKGKSGFLAPLQLSDALVTFLGTGENAL RSEVVKRMWDYIKQNN
Subjt:  ESNDVIPAKSSQKEKQQKEKQQKEKQQKEKPQKKQRQKQGKEEDSDDSGREEKRQKKGKSGFLAPLQLSDALVTFLGTGENALPRSEVVKRMWDYIKQNN

Query:  LQDPSDKRRIISDEKLKELFDVDSFNGFTVSKLLATHFVKKTK
        LQDPSDKRRII DEKLKELFDVDSFNGFTVSKLLATHFVKKTK
Subjt:  LQDPSDKRRIISDEKLKELFDVDSFNGFTVSKLLATHFVKKTK

XP_023512445.1 upstream activation factor subunit spp27-like [Cucurbita pepo subsp. pepo]

2.4e-152

89.71

Show/hide

Query:  MVSDSELIGRLREFLRNSDLNTTTTAIVRRKLEEDFGVDLSDKKRFIREQVDLFLQTEHERAGEEDGGDCEEVDQEDGDENLKTEEEEGDSEDGYNDDDD
        MVSDSELI RLREFLR+SDLN TTTAIVRRKLEE FGVDLSDKKRFIREQVDLFLQTEHER  EE GGDCEE DQEDGDENLKTEEE+GDSEDG NDD D
Subjt:  MVSDSELIGRLREFLRNSDLNTTTTAIVRRKLEEDFGVDLSDKKRFIREQVDLFLQTEHERAGEEDGGDCEEVDQEDGDENLKTEEEEGDSEDGYNDDDD

Query:  DAKSKTGSNDLGKEVKKRGGGGFTKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPL
        D K KTGSN L    KKRGGGGF+KLCSLSPQLQEFIGVPEMARTEVVKQLWNHIR  NLQDPSNRRNILCDE LKALF V+SINMFQMNKALSKHIWPL
Subjt:  DAKSKTGSNDLGKEVKKRGGGGFTKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPL

Query:  ESNDVIPAKSSQKEKQQKEKQQKEKQQKEKPQKKQRQKQGKEEDSDDSGREEKRQKKGKSGFLAPLQLSDALVTFLGTGENALPRSEVVKRMWDYIKQNN
        ESNDVIPAKSSQKEKQQKEKQ+KEKQ KEKPQKK RQKQGKEEDSDDS REEKRQKKGKSGFLAPLQLSDALVTFLGTGE+AL RS+VVKRMWDYIKQNN
Subjt:  ESNDVIPAKSSQKEKQQKEKQQKEKQQKEKPQKKQRQKQGKEEDSDDSGREEKRQKKGKSGFLAPLQLSDALVTFLGTGENALPRSEVVKRMWDYIKQNN

Query:  LQDPSDKRRIISDEKLKELFDVDSFNGFTVSKLLATHFVK
        LQDPSDKRR+I DEKLKELFDV+SF+GFTVSKLLATHFVK
Subjt:  LQDPSDKRRIISDEKLKELFDVDSFNGFTVSKLLATHFVK

XP_038901460.1 upstream activation factor subunit spp27-like isoform X1 [Benincasa hispida]

4.3e-154

89.41

Show/hide

Query:  MVSDSELIGRLREFLRNSDLNTTTTAIVRRKLEEDFGVDLSDKKRFIREQVDLFLQTEHERAGEEDGGDCEEVDQEDGDENLKTEEEEGDSEDGYNDDDD
        MVSDSELIGRLREFLRNSDLNTTTTAIVRRKLEEDFG+DLSDKKRFIREQVD+FLQTEHERA EE  GDCEEVDQE GDENLKTEE++GDSEDG NDD+D
Subjt:  MVSDSELIGRLREFLRNSDLNTTTTAIVRRKLEEDFGVDLSDKKRFIREQVDLFLQTEHERAGEEDGGDCEEVDQEDGDENLKTEEEEGDSEDGYNDDDD

Query:  DAKSKTGSNDLGKEVKKRGGGGFTKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPL
        D K K GSN L KE KKRGGGGF+KLCSLSPQLQEFIG PEMARTEVVKQLWNHIR KNLQDPSNRRNILCD+ LKALFGVNSINMFQMNKALSKHIWPL
Subjt:  DAKSKTGSNDLGKEVKKRGGGGFTKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPL

Query:  ESNDVIPAKSSQKEKQQKEKQQKEKQQKEKPQKKQRQKQGKEEDSDDSGREEKRQKKGKSGFLAPLQLSDALVTFLGTGENALPRSEVVKRMWDYIKQNN
        ESNDVIPA SS     QKEKQQKEKQ KEKPQKK RQKQGKEEDSDDS REEKRQKKGKSGFLAPLQLSDALVTFLGTGE+ALPRS+VVKRMWDYIKQNN
Subjt:  ESNDVIPAKSSQKEKQQKEKQQKEKQQKEKPQKKQRQKQGKEEDSDDSGREEKRQKKGKSGFLAPLQLSDALVTFLGTGENALPRSEVVKRMWDYIKQNN

Query:  LQDPSDKRRIISDEKLKELFDVDSFNGFTVSKLLATHFVK
        LQDPSDKRRII DE+LKELFDVDSF+GFTVSKLLATHF+K
Subjt:  LQDPSDKRRIISDEKLKELFDVDSFNGFTVSKLLATHFVK

TrEMBL top hits

e value

%identity

Alignment

A0A6J1EMX5 upstream activation factor subunit UAF30-like

1.5e-152

89.71

Show/hide

Query:  MVSDSELIGRLREFLRNSDLNTTTTAIVRRKLEEDFGVDLSDKKRFIREQVDLFLQTEHERAGEEDGGDCEEVDQEDGDENLKTEEEEGDSEDGYNDDDD
        MVSDSELI RLREFLR+SDLN TTTAIVRRKLEE FGVDLSDKKRFIREQVDLFLQTEHER  EE GGDCEE DQEDGDENLKTEEE+GDSEDG NDD D
Subjt:  MVSDSELIGRLREFLRNSDLNTTTTAIVRRKLEEDFGVDLSDKKRFIREQVDLFLQTEHERAGEEDGGDCEEVDQEDGDENLKTEEEEGDSEDGYNDDDD

Query:  DAKSKTGSNDLGKEVKKRGGGGFTKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPL
        D K KTGSN L    KKRGGGGF+KLCSLSPQLQEFIGVPEMARTEVVKQLWNHIR  NLQDPSNRRNILCDE LKALF V+SINMFQMNKALSKHIWPL
Subjt:  DAKSKTGSNDLGKEVKKRGGGGFTKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPL

Query:  ESNDVIPAKSSQKEKQQKEKQQKEKQQKEKPQKKQRQKQGKEEDSDDSGREEKRQKKGKSGFLAPLQLSDALVTFLGTGENALPRSEVVKRMWDYIKQNN
        ESNDVIPAKSSQKEKQQKEKQ+KEKQ KEKPQKK RQKQGKEEDSDDS REEKRQKKGKSGFLAPLQLSDALVTFLGTGE+AL RS+VVKRMWDYIKQNN
Subjt:  ESNDVIPAKSSQKEKQQKEKQQKEKQQKEKPQKKQRQKQGKEEDSDDSGREEKRQKKGKSGFLAPLQLSDALVTFLGTGENALPRSEVVKRMWDYIKQNN

Query:  LQDPSDKRRIISDEKLKELFDVDSFNGFTVSKLLATHFVK
        LQDPSDKRR+I DEKLKELFDV+SF+GFTVSKLLATHFVK
Subjt:  LQDPSDKRRIISDEKLKELFDVDSFNGFTVSKLLATHFVK

A0A6J1G606 upstream activation factor subunit UAF30-like isoform X1

1.7e-151

87.76

Show/hide

Query:  MVSDSELIGRLREFLRNSDLNTTTTAIVRRKLEEDFGVDLSDKKRFIREQVDLFLQTEHERAGEEDGGDCEEVDQEDGDENLKTEEEEGDSEDGYNDDDD
        MVSDSELI RLRE LRNSDLNTTTTAIVRRKLEEDF +DLSDKK+FIREQVDLFL TEH+R  EEDGGDC EVDQEDGD+N K EEE+GDS DG N +DD
Subjt:  MVSDSELIGRLREFLRNSDLNTTTTAIVRRKLEEDFGVDLSDKKRFIREQVDLFLQTEHERAGEEDGGDCEEVDQEDGDENLKTEEEEGDSEDGYNDDDD

Query:  DAKSKTGSNDLGKEVKKRGGGGFTKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPL
        D KSKTGSN+LGKEVKKR GGGF+KLCSLSPQLQEFIGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEP KALFGVNSI+MFQMNKALSKHIWPL
Subjt:  DAKSKTGSNDLGKEVKKRGGGGFTKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPL

Query:  ESNDVIPAKSSQKEKQQKEKQQKEKQQKEKPQKKQRQKQGKEEDSDDSGREEKRQKKGKSGFLAPLQLSDALVTFLGTGENALPRSEVVKRMWDYIKQNN
        ESNDV PAKSS          QKEKQQKEKPQKK+R+KQGKEEDSDDS RE KRQKKGKSGFLAPLQLSDALVTFLGTGENAL RSEVVKRMWDY+KQNN
Subjt:  ESNDVIPAKSSQKEKQQKEKQQKEKQQKEKPQKKQRQKQGKEEDSDDSGREEKRQKKGKSGFLAPLQLSDALVTFLGTGENALPRSEVVKRMWDYIKQNN

Query:  LQDPSDKRRIISDEKLKELFDVDSFNGFTVSKLLATHFVKKTK
        LQDPSDKRRII DEKLKELFDVDSFNGFTVSKLLATHFVKKTK
Subjt:  LQDPSDKRRIISDEKLKELFDVDSFNGFTVSKLLATHFVKKTK

A0A6J1G661 upstream activation factor subunit UAF30-like isoform X2

9.1e-150

87.46

Show/hide

Query:  MVSDSELIGRLREFLRNSDLNTTTTAIVRRKLEEDFGVDLSDKKRFIREQVDLFLQTEHERAGEEDGGDCEEVDQEDGDENLKTEEEEGDSEDGYNDDDD
        MVSDSELI RLRE LRNSDLNTTTTAIVRRKLEEDF +DLSDKK+FIREQVDLFL TEH+R  EEDGGDC EVDQEDGD+N K EEE+GDS DG N +DD
Subjt:  MVSDSELIGRLREFLRNSDLNTTTTAIVRRKLEEDFGVDLSDKKRFIREQVDLFLQTEHERAGEEDGGDCEEVDQEDGDENLKTEEEEGDSEDGYNDDDD

Query:  DAKSKTGSNDLGKEVKKRGGGGFTKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPL
        D KSKTGSN+LGKEVKKR GGGF+KLCSLSPQLQEFIGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEP KALFGVNSI+MFQMNKALSKHIWPL
Subjt:  DAKSKTGSNDLGKEVKKRGGGGFTKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPL

Query:  ESNDVIPAKSSQKEKQQKEKQQKEKQQKEKPQKKQRQKQGKEEDSDDSGREEKRQKKGKSGFLAPLQLSDALVTFLGTGENALPRSEVVKRMWDYIKQNN
        ESNDV PAKSS          QKEKQQKEKPQKK+R+KQGK EDSDDS RE KRQKKGKSGFLAPLQLSDALVTFLGTGENAL RSEVVKRMWDY+KQNN
Subjt:  ESNDVIPAKSSQKEKQQKEKQQKEKQQKEKPQKKQRQKQGKEEDSDDSGREEKRQKKGKSGFLAPLQLSDALVTFLGTGENALPRSEVVKRMWDYIKQNN

Query:  LQDPSDKRRIISDEKLKELFDVDSFNGFTVSKLLATHFVKKTK
        LQDPSDKRRII DEKLKELFDVDSFNGFTVSKLLATHFVKKTK
Subjt:  LQDPSDKRRIISDEKLKELFDVDSFNGFTVSKLLATHFVKKTK

A0A6J1KZW6 upstream activation factor subunit UAF30-like isoform X2

4.8e-151

87.46

Show/hide

Query:  MVSDSELIGRLREFLRNSDLNTTTTAIVRRKLEEDFGVDLSDKKRFIREQVDLFLQTEHERAGEEDGGDCEEVDQEDGDENLKTEEEEGDSEDGYNDDDD
        MVSDSELI RLRE LRNSDLNTTTTAIVRRKLEED+ +DLSDKK+FIREQVDLFL TEH+R  EEDGG C+EVDQEDGD+N K EEE+G SEDG N DDD
Subjt:  MVSDSELIGRLREFLRNSDLNTTTTAIVRRKLEEDFGVDLSDKKRFIREQVDLFLQTEHERAGEEDGGDCEEVDQEDGDENLKTEEEEGDSEDGYNDDDD

Query:  DAKSKTGSNDLGKEVKKRGGGGFTKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPL
        D KSKTGSN++GKEVKKR GGGF+KLCSLSPQLQEFIGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPL
Subjt:  DAKSKTGSNDLGKEVKKRGGGGFTKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPL

Query:  ESNDVIPAKSSQKEKQQKEKQQKEKQQKEKPQKKQRQKQGKEEDSDDSGREEKRQKKGKSGFLAPLQLSDALVTFLGTGENALPRSEVVKRMWDYIKQNN
        ESNDV PAKSS          QKEKQQKEKPQKK+R+KQGK EDSD S RE KRQKKGKSGFLAPLQLSDALVTFLGTGENAL RSEVVKRMWDYIKQNN
Subjt:  ESNDVIPAKSSQKEKQQKEKQQKEKQQKEKPQKKQRQKQGKEEDSDDSGREEKRQKKGKSGFLAPLQLSDALVTFLGTGENALPRSEVVKRMWDYIKQNN

Query:  LQDPSDKRRIISDEKLKELFDVDSFNGFTVSKLLATHFVKKTK
        LQDPSDKRRII DEKLKELFDVDSFNGFTVSKLLATHFVKKTK
Subjt:  LQDPSDKRRIISDEKLKELFDVDSFNGFTVSKLLATHFVKKTK

A0A6J1L2C3 upstream activation factor subunit UAF30-like isoform X1

8.8e-153

87.76

Show/hide

Query:  MVSDSELIGRLREFLRNSDLNTTTTAIVRRKLEEDFGVDLSDKKRFIREQVDLFLQTEHERAGEEDGGDCEEVDQEDGDENLKTEEEEGDSEDGYNDDDD
        MVSDSELI RLRE LRNSDLNTTTTAIVRRKLEED+ +DLSDKK+FIREQVDLFL TEH+R  EEDGG C+EVDQEDGD+N K EEE+G SEDG N DDD
Subjt:  MVSDSELIGRLREFLRNSDLNTTTTAIVRRKLEEDFGVDLSDKKRFIREQVDLFLQTEHERAGEEDGGDCEEVDQEDGDENLKTEEEEGDSEDGYNDDDD

Query:  DAKSKTGSNDLGKEVKKRGGGGFTKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPL
        D KSKTGSN++GKEVKKR GGGF+KLCSLSPQLQEFIGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPL
Subjt:  DAKSKTGSNDLGKEVKKRGGGGFTKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPL

Query:  ESNDVIPAKSSQKEKQQKEKQQKEKQQKEKPQKKQRQKQGKEEDSDDSGREEKRQKKGKSGFLAPLQLSDALVTFLGTGENALPRSEVVKRMWDYIKQNN
        ESNDV PAKSS          QKEKQQKEKPQKK+R+KQGKEEDSD S RE KRQKKGKSGFLAPLQLSDALVTFLGTGENAL RSEVVKRMWDYIKQNN
Subjt:  ESNDVIPAKSSQKEKQQKEKQQKEKQQKEKPQKKQRQKQGKEEDSDDSGREEKRQKKGKSGFLAPLQLSDALVTFLGTGENALPRSEVVKRMWDYIKQNN

Query:  LQDPSDKRRIISDEKLKELFDVDSFNGFTVSKLLATHFVKKTK
        LQDPSDKRRII DEKLKELFDVDSFNGFTVSKLLATHFVKKTK
Subjt:  LQDPSDKRRIISDEKLKELFDVDSFNGFTVSKLLATHFVKKTK

SwissProt top hits

e value

%identity

Alignment

O74503 Upstream activation factor subunit spp27

3.0e-09

28.96

Show/hide

Query:  LREFLRNSDLNTTTTAIVRRKLEEDFGVDLSDKKRFIREQVDLFLQTEHERAGEEDGGDCEEVDQEDGDENLKTEEEEGDSEDGYNDDDDDAKSKTGSND
        +++ L   D  T +   VR+ LEE   VDLS  K+ +     L L+   E A   +    E+  Q    +       E  +E+G        K K    +
Subjt:  LREFLRNSDLNTTTTAIVRRKLEEDFGVDLSDKKRFIREQVDLFLQTEHERAGEEDGGDCEEVDQEDGDENLKTEEEEGDSEDGYNDDDDDAKSKTGSND

Query:  LGKEVKKR--GGGGFTKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLESNDVIPA
         GK  + +        K   LSP+L EF+G+ +++R + VK+LW +I+  +LQDP+++R ILCD+ LK++F V++++MF MNK L+  +  +  +D +P 
Subjt:  LGKEVKKR--GGGGFTKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLESNDVIPA

Query:  KSSQKEKQQKEKQQKEKQQKE
           + E+        ++++KE
Subjt:  KSSQKEKQQKEKQQKEKQQKE

Q05024 Protein TRI1

8.0e-10

31.31

Show/hide

Query:  VRRKLEEDFGVDLSDKKRFIREQV-DLFLQTEHERAGEEDGGDCEEVDQEDGDENLKTEEEEGDSEDGYNDDDDDAKSKTGSNDLGKEVKKRGGGGFTKL
        VR+ L+  + V+L  +++ I E + + F   +          D    DQE      K EE    S           K K  S    K  KK+     +  
Subjt:  VRRKLEEDFGVDLSDKKRFIREQV-DLFLQTEHERAGEEDGGDCEEVDQEDGDENLKTEEEEGDSEDGYNDDDDDAKSKTGSNDLGKEVKKRGGGGFTKL

Query:  CS-----LSPQLQEFIGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLESNDVIPAKSSQKEKQQKE
         S     LS  LQ+F+G  E+ RT+VVK +W +I+E +LQ+P +RR ILCDE ++ +FG   + MF MNK L+KH++    ++++  +  QK+  +KE
Subjt:  CS-----LSPQLQEFIGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLESNDVIPAKSSQKEKQQKE

Q08747 Upstream activation factor subunit UAF30

2.5e-11

30.62

Show/hide

Query:  LRNSDLNTTTTAIVRRKLEEDFGVDLSDKKRFIREQVDLFLQTEHERAGEEDGGDCEEVDQEDGDENLKTEEEEGDSEDGYNDDDDDAKSKTGSNDLGKE
        L + DL T TT  VR  L+E + +D+  + + I + +   L    ER   E     E++ +E+    ++  +E   S+    ++ +D+++K      G  
Subjt:  LRNSDLNTTTTAIVRRKLEEDFGVDLSDKKRFIREQVDLFLQTEHERAGEEDGGDCEEVDQEDGDENLKTEEEEGDSEDGYNDDDDDAKSKTGSNDLGKE

Query:  VKKRGGGG-----FTKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIW-PLESNDVIPA
        V+K+ G        T+  +LS  L   +G  E+ RTEVV++LW +I+  NLQ+P+N++ ILCDE L+ + G  S NMF+M+K L+ H+  P + +D  P 
Subjt:  VKKRGGGG-----FTKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIW-PLESNDVIPA

Query:  KSSQKEKQQ
            + K++
Subjt:  KSSQKEKQQ

Arabidopsis top hits

e value

%identity

Alignment

AT1G49520.1 SWIB complex BAF60b domain-containing protein

1.1e-65

46.99

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Query:  MVSDSELIGRLREFLRNSDLNTTTTAIVRRKLEEDFGVDLSDKKRFIREQVDLFLQTEH--ERAGEEDGGDCEEVDQEDGDENLKTEEEEGDSEDGYNDD
        MVSDS+L+ +LRE LR+SDL TTT A VRR+LE  FGV+L+DKK F+REQ+D FL+++   E   E++  DC      +GD+N        D E   NDD
Subjt:  MVSDSELIGRLREFLRNSDLNTTTTAIVRRKLEEDFGVDLSDKKRFIREQVDLFLQTEH--ERAGEEDGGDCEEVDQEDGDENLKTEEEEGDSEDGYNDD

Query:  DDDAKSKTGSNDLGKEVKKRGGGGFTKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIW
        D          +L  + KKR GGGF K+C LSPQL++F+G  ++ARTEVVK++W +IRE +LQDP+NRRNILCDE L +LF V +INMFQMNKAL+KHIW
Subjt:  DDDAKSKTGSNDLGKEVKKRGGGGFTKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIW

Query:  PL----------ESNDVIPAKSSQKEKQQKEKQQKEKQQKEKPQKKQRQKQGKEEDSDDSGREEKRQKKGKSGFLAPLQLSDALVTFLGTGENALPRSEV
         L          +  DV      + EK  K ++  E  ++E  +++ R  + ++       + E++ KK   GF     LS  L  F GT +  L R+EV
Subjt:  PL----------ESNDVIPAKSSQKEKQQKEKQQKEKQQKEKPQKKQRQKQGKEEDSDDSGREEKRQKKGKSGFLAPLQLSDALVTFLGTGENALPRSEV

Query:  VKRMWDYIKQNNLQDPSDKRRIISDEKLKELFDVDSFNGFTVSKLLATH
        VK +W YIK+NNLQDPSDKR II DE L+ LF V+S N F ++K LA H
Subjt:  VKRMWDYIKQNNLQDPSDKRRIISDEKLKELFDVDSFNGFTVSKLLATH

AT2G14880.1 SWIB/MDM2 domain superfamily protein

3.6e-13

40.74

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Query:  KRGGGGFTKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALF-GVNSINMFQMNKALSKH
        KR   G  K   +SP++Q+ + +PE+ART+ +K++W +I+E +LQDP N+R ILCDE LK +F G + +   ++ K +  H
Subjt:  KRGGGGFTKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALF-GVNSINMFQMNKALSKH

AT2G35605.1 SWIB/MDM2 domain superfamily protein

2.1e-13

43.75

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Query:  RGGGGFTKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALF-GVNSINMFQMNKALSKH
        R G G  K+  +S  L  FIG  E++RT  VK++W +I+  NLQ+P N+R ILCDE LK +F G +++   +++K LS+H
Subjt:  RGGGGFTKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALF-GVNSINMFQMNKALSKH

AT3G19080.1 SWIB complex BAF60b domain-containing protein

2.9e-63

39.06

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Query:  MVSDSELIGRLREFLRNSDLNTTTTAIVRRKLEEDFGVDLSDKKRFIREQVDLFLQTEHERAGEEDGGDCEEVDQEDGDENLKTEEEEGDSEDGYNDDDD
        MVSD +L+ RLRE L +SDLNT T A VRR+LE DFGVDL+DKK +IR+Q+D FL++       ED  +  +V++    + +K E E GD ED    D D
Subjt:  MVSDSELIGRLREFLRNSDLNTTTTAIVRRKLEEDFGVDLSDKKRFIREQVDLFLQTEHERAGEEDGGDCEEVDQEDGDENLKTEEEEGDSEDGYNDDDD

Query:  DAKSKTGSNDLGKEVKKRGGGGFTKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPL
         + S+    +   + KKR GGG TK+  LSPQL++ +G  ++ RTEVVK++W +IREK+LQDP +RR I+CDE L +LF V +INMFQMNKAL+KHIWPL
Subjt:  DAKSKTGSNDLGKEVKKRGGGGFTKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPL

Query:  ---------------------------ESNDVIPAKSSQKEKQQ-----KEKQQKEKQQKEKPQKK----------------------------------
                                   +S +V   K  + E+Q+     K K++K  +  EKP++K                                  
Subjt:  ---------------------------ESNDVIPAKSSQKEKQQ-----KEKQQKEKQQKEKPQKK----------------------------------

Query:  ----------------------------------------------------------QRQKQGKEEDSDDSGREE--KRQKKGKSGFLAPLQLSDALVT
                                                                  +  K GK++   D   EE  ++ KK K   LAPL LSDALV 
Subjt:  ----------------------------------------------------------QRQKQGKEEDSDDSGREE--KRQKKGKSGFLAPLQLSDALVT

Query:  FLGTGENALPRSEVVKRMWDYIKQNNLQDPSDKRRIISDEKLKELFDVDSFNGFTVSKLLATHFVK
        FLG GEN+L R++VVKR+W+YI  N+LQDPSDKRR+I DEKLKELF+VDSF   +VSKLL  HF+K
Subjt:  FLGTGENALPRSEVVKRMWDYIKQNNLQDPSDKRRIISDEKLKELFDVDSFNGFTVSKLLATHFVK

AT4G22360.1 SWIB complex BAF60b domain-containing protein

2.8e-34

34.8

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Query:  KKRGGGGFTKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLESNDVIPAKSSQKEK
        +K G GG  K+C +SP+L+  +G P + RTE+V+QLW +IR+ NLQDPSN+R I+CD+ L+ +F  +  +MF+MNK L+KHI PL+     P+K S + K
Subjt:  KKRGGGGFTKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLESNDVIPAKSSQKEK

Query:  QQKEKQQKEKQQKEKPQKKQRQKQGKEEDSDDSGREEKRQKKGKSGFLAPLQLSDALVTFLGTGENALPRSEVVKRMWDYIKQNNLQDPSDKRRIISDEK
        + K + +                           + E  +    +   + + LS+ L  F GTGE  +   E+++R+W+YIK NNL+DP +   I  DEK
Subjt:  QQKEKQQKEKQQKEKPQKKQRQKQGKEEDSDDSGREEKRQKKGKSGFLAPLQLSDALVTFLGTGENALPRSEVVKRMWDYIKQNNLQDPSDKRRIISDEK

Query:  LKELFDVDSFNGFTVSKLLATHFVKKT
        L++L   +S +   ++++L  H  K++
Subjt:  LKELFDVDSFNGFTVSKLLATHFVKKT

Sequences

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CDS sequence

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ATGGTTTCCGACTCGGAGCTCATCGGCCGGCTCCGAGAGTTTCTTCGGAATTCAGACCTCAATACCACCACCACTGCTATCGTCCGCCGGAAGCTCGAGGAGGACTTTGG
CGTTGATTTGTCCGATAAGAAGCGGTTTATTAGGGAGCAGGTCGACTTGTTCCTCCAGACTGAGCACGAGAGAGCTGGGGAAGAAGATGGCGGCGACTGCGAGGAAGTCG
ACCAGGAGGATGGAGATGAAAATTTGAAGACGGAAGAGGAGGAGGGAGATAGTGAAGACGGATATAACGACGACGATGATGACGCGAAGAGTAAAACGGGCTCTAACGAT
CTTGGTAAAGAGGTGAAGAAAAGAGGAGGGGGTGGTTTTACCAAGCTATGTAGCCTTTCCCCACAACTGCAGGAATTTATAGGAGTTCCTGAAATGGCAAGGACTGAGGT
TGTGAAGCAACTATGGAACCACATTAGAGAGAAGAATTTGCAAGATCCCAGTAATAGGAGAAATATTCTCTGTGATGAACCTTTAAAAGCACTCTTTGGTGTTAATTCCA
TCAACATGTTTCAAATGAATAAAGCTCTATCAAAGCATATTTGGCCGTTGGAATCAAATGACGTTATTCCAGCCAAATCAAGTCAGAAGGAAAAGCAGCAAAAAGAGAAG
CAGCAAAAGGAGAAGCAGCAAAAGGAGAAGCCACAGAAGAAGCAGCGGCAGAAGCAAGGAAAAGAAGAAGATTCAGATGACTCCGGGAGAGAGGAAAAGCGGCAAAAGAA
AGGGAAATCTGGTTTTCTTGCTCCTCTTCAACTTTCGGATGCTCTGGTGACTTTTCTTGGTACAGGAGAGAATGCATTGCCTCGCTCTGAAGTAGTGAAAAGAATGTGGG
ATTACATAAAGCAAAACAACCTTCAGGACCCTTCTGACAAAAGGAGAATAATCAGTGACGAGAAGCTAAAAGAACTCTTCGATGTTGATTCGTTTAACGGTTTCACTGTT
TCGAAACTCCTGGCCACCCATTTTGTAAAAAAGACAAAATAG

mRNA sequence

Show/hide mRNA sequence

CTCCCATCTGTTATTCACGCAAAGGCTTTTTCCTCTTCCTTTCCTTTCTTTTCCTCTTCCTCTTCCTCTTGGAAGCCAACGCCAAAAACCGCACACCACGGAGGCTGTGC
TTCTCAACTCGAAAACCTACCCACCAATCATCATCTGCATTATTTCTCTTTCAATCTGCGAGGTTTTGCTCTTCTTCCTTTAAGATTGTGGATTACAACAATGGTTTCCG
ACTCGGAGCTCATCGGCCGGCTCCGAGAGTTTCTTCGGAATTCAGACCTCAATACCACCACCACTGCTATCGTCCGCCGGAAGCTCGAGGAGGACTTTGGCGTTGATTTG
TCCGATAAGAAGCGGTTTATTAGGGAGCAGGTCGACTTGTTCCTCCAGACTGAGCACGAGAGAGCTGGGGAAGAAGATGGCGGCGACTGCGAGGAAGTCGACCAGGAGGA
TGGAGATGAAAATTTGAAGACGGAAGAGGAGGAGGGAGATAGTGAAGACGGATATAACGACGACGATGATGACGCGAAGAGTAAAACGGGCTCTAACGATCTTGGTAAAG
AGGTGAAGAAAAGAGGAGGGGGTGGTTTTACCAAGCTATGTAGCCTTTCCCCACAACTGCAGGAATTTATAGGAGTTCCTGAAATGGCAAGGACTGAGGTTGTGAAGCAA
CTATGGAACCACATTAGAGAGAAGAATTTGCAAGATCCCAGTAATAGGAGAAATATTCTCTGTGATGAACCTTTAAAAGCACTCTTTGGTGTTAATTCCATCAACATGTT
TCAAATGAATAAAGCTCTATCAAAGCATATTTGGCCGTTGGAATCAAATGACGTTATTCCAGCCAAATCAAGTCAGAAGGAAAAGCAGCAAAAAGAGAAGCAGCAAAAGG
AGAAGCAGCAAAAGGAGAAGCCACAGAAGAAGCAGCGGCAGAAGCAAGGAAAAGAAGAAGATTCAGATGACTCCGGGAGAGAGGAAAAGCGGCAAAAGAAAGGGAAATCT
GGTTTTCTTGCTCCTCTTCAACTTTCGGATGCTCTGGTGACTTTTCTTGGTACAGGAGAGAATGCATTGCCTCGCTCTGAAGTAGTGAAAAGAATGTGGGATTACATAAA
GCAAAACAACCTTCAGGACCCTTCTGACAAAAGGAGAATAATCAGTGACGAGAAGCTAAAAGAACTCTTCGATGTTGATTCGTTTAACGGTTTCACTGTTTCGAAACTCC
TGGCCACCCATTTTGTAAAAAAGACAAAATAGCAGAAGCTAAAGTTGATTATCAAAAGTGTGAGAATTTAGTTGGTGCAAATATGAAATTTGCCCGCATATTTGTCAACC
TACATTTGTTTTGTAATTATTCACAGTTTTGGTTCTTTTTTCTTTTGTTTGTTGCTTACCAAACTAACCCGTTTCTTTTTGGCCAATATGAGCATAGCTCAATCGGTAAA
AAGCTTATATCGAGTCCTACTTTCACATTATCAAACTATAGTTCTCTCTCTAACGCTTCTAAAGGTTTCACCGAAGATTATTGTAAGGCATGAATGAAAATGAGGTGAAA
TTGATGTATATATTCTATTTCATGTGGAAAGATAACAGTGGTTGCCATTCAATAAGAAGTAATTATTG

Protein sequence

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MVSDSELIGRLREFLRNSDLNTTTTAIVRRKLEEDFGVDLSDKKRFIREQVDLFLQTEHERAGEEDGGDCEEVDQEDGDENLKTEEEEGDSEDGYNDDDDDAKSKTGSND
LGKEVKKRGGGGFTKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLESNDVIPAKSSQKEKQQKEK
QQKEKQQKEKPQKKQRQKQGKEEDSDDSGREEKRQKKGKSGFLAPLQLSDALVTFLGTGENALPRSEVVKRMWDYIKQNNLQDPSDKRRIISDEKLKELFDVDSFNGFTV
SKLLATHFVKKTK

Tan0003110 (gene) of Snake gourd v1 genome